Basic Information

Insect: Cryptocheilus praepositus
Gene Symbol: -
Assembly: GCA_033815515.1
Location: JAWWQZ010000291.1:4992865-5003610[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.5e-05 0.0039 18.0 1.4 1 23 444 466 444 466 0.96

2 10 9e-05 0.0098 16.8 1.7 1 20 472 491 472 494 0.93

3 10 1.5e-05 0.0016 19.2 1.1 1 23 500 522 500 522 0.98

4 10 5.1e-05 0.0056 17.5 4.4 1 21 528 548 528 550 0.95

5 10 6.9e-06 0.00076 20.3 5.6 1 23 556 578 556 578 0.99

6 10 1.6e-05 0.0017 19.1 5.3 1 23 584 606 584 606 0.97

7 10 0.0001 0.011 16.6 9.1 1 23 612 634 612 634 0.97

8 10 5.9e-08 6.4e-06 26.8 2.7 1 23 640 662 640 662 0.98

9 10 4.3e-05 0.0048 17.8 6.7 1 23 668 690 668 690 0.97

10 10 1.3e-05 0.0015 19.4 5.8 1 23 696 718 696 718 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.5e-05	0.0039	18.0	1.4	1	23	444	466	444	466	0.96
2	10	9e-05	0.0098	16.8	1.7	1	20	472	491	472	494	0.93
3	10	1.5e-05	0.0016	19.2	1.1	1	23	500	522	500	522	0.98
4	10	5.1e-05	0.0056	17.5	4.4	1	21	528	548	528	550	0.95
5	10	6.9e-06	0.00076	20.3	5.6	1	23	556	578	556	578	0.99
6	10	1.6e-05	0.0017	19.1	5.3	1	23	584	606	584	606	0.97
7	10	0.0001	0.011	16.6	9.1	1	23	612	634	612	634	0.97
8	10	5.9e-08	6.4e-06	26.8	2.7	1	23	640	662	640	662	0.98
9	10	4.3e-05	0.0048	17.8	6.7	1	23	668	690	668	690	0.97
10	10	1.3e-05	0.0015	19.4	5.8	1	23	696	718	696	718	0.98

Sequence Information

Coding Sequence: ATGAACAGTGAGCAGCATACATTGCCAGCGACTACGCAGGCGCAACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCGTACCCAGGTGGTTTGGCTACTGCGACCAGTCTTGGCAATGTAGGGAATACCCCTCATTCATCCGCGGACCTGCGTGTAGGTACAGCTGTAGCATTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTGTTTCCCGGACCGCTACCTCAGGTCTCGGTCTACCACCATTCCCACCACAACTCCTCGCATAGGAGTGGTGGAGGTGGGGAGGCACCATCCAAAGAGCCAGCCTCCTCATTGAACCAGGATATGGCGTTGACTTCCAGTTCGCACCATCAGTCAACACCgcctcatcatcatcatcagccGTCAGTTAGCAACAGCAGTCATCATAGCTCTCTACAGACAAATCCGCAGATTCCAGTTTCCCTTCCTGGACTTAACTTAGACGGGGCTCATATTCCTGCGAGCGTCAGTCACTTACAGGCAGCACATGCACAAATGCAGCAGCAAATGCAGGCACAACAACAACAGCTGcaccagcagcaacaacagcagcagcaacagtcgCAACAGCAGTCTCATCACCAGATGCAGAACCATCAAAACGCTCAAAACAATGGACCGAGCGCGCATAGTCAGAACGCACAACGGGACGACAACAAGGTCAAGAAGGACGAGGGTGGCAGCTGTACGACCGAACGTTGCAGTGATAATCAGGTTCATTGTCAAGTCCAATGCGATCTTCAATTACAACCGCCGCAAGACTTACAACAGAGCCTaatgcaacagcagcagcagcagcaacagcaacaaatCGGCGTCAATATAAGTGGGAACTCGTCGGCCGAAAGCGGCAATCAGAACAATTCCGAAAAGCctgagaaagaaaaggaattgCGTCAGCTGAACATGACACAATTCCAAGTTCCAGACCTGAAACCAGGAGGTCATATGATGGACGTGAGGACGGCAAATGGTTCGGTGGTTAAGATCAGTGCTGGAAACGAACAAGATTTAGCTAAGACCCTTGGTGTAGAGATGGTGCAAAGTATGTACAAGGTTAACGTTGAAGATATCAATCAACTGTTGGCATATCACGAAGTGTTTGGGAAGCTGCAGAGTGAAATAGCGGCTGGTACAACTTTAGTCGGAAGTACAGTTCCCACGCAAACGGTCACCACGATTCAAAATGGCACACCGATCGTGCAACAGGTTCAATTGAATAAGTTCGATATAAAAAGCAGTGATGGCGAGGCAACACCAGGGCCAAGTGCCTCACCTGTGTCTGTCGGTAGTCATGCCTGTGAAATATGTGGAAAGATCTTCCAGTTTCGCTACCAATTAATCGTCCATCGACGATACCATACAGAGAAAAAACCATTTACTTGCCAGGTATGTGGAAAAGCATTCTCGAATGCGAACGACCTGTCGCAGCATGGAAAATGCCATTTAGGCGGATCCATGTTCATGTGTACAGTATGTTTTCACGTCTTTGCGAATGCACCTTCATTGGAGAGGCATATGAAGAGACACGCTACTGACAAACCGTACAATTGCACAGTTTGCGGAAAAAGTTTTGCACGAAAGGAACATTTGGATAATCATACCAGATGTCACACCGGTGAAACACCATATAGGTGCCAGTACTGTTCGAAGACATTTACCCGAAAAGAACATATGGTAAATCACGTTCGCAAACACACTGGTGAGACTCCCCATCGATGTGATATTTGCAAGAAGAGCTTTACTCGCAAAGAACACTTTATGAACCATGTTATGTGGCACACAGGAGAAACTCCCCATCACTGTCATGCCTGTGGCAAGAAGTACACGCGCAAAGAGCATCTCGCCAACCACATGCGTTCGCATACCAACGACACTCCATTCCGCTGCGAAATATGCGGTAAGTCCTTTACGAGGAAGGAGCACTTCACGAACCACATAATGTGGCACACGGGCGAGACGCCGCACCGCTGCGATTTCTGCTCGAAGACGTTCACTCGAAAGGAGCATCTCCTGAACCACGTTCGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAATCACATCCGCCAACACACAGGTGAGAGCGGTTGGCAGATGTTCACTTTCACGGACAACCAATCGTAA
Protein Sequence: MNSEQHTLPATTQAQQEDVNAGQSGRPSYPGGLATATSLGNVGNTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSGGGGEAPSKEPASSLNQDMALTSSSHHQSTPPHHHHQPSVSNSSHHSSLQTNPQIPVSLPGLNLDGAHIPASVSHLQAAHAQMQQQMQAQQQQLHQQQQQQQQQSQQQSHHQMQNHQNAQNNGPSAHSQNAQRDDNKVKKDEGGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQQQQQIGVNISGNSSAESGNQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTANGSVVKISAGNEQDLAKTLGVEMVQSMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTEKKPFTCQVCGKAFSNANDLSQHGKCHLGGSMFMCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCHACGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGESGWQMFTFTDNQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00765890;
90% Identity: iTF_01354830;
80% Identity: -