Sfug029591.1
Basic Information
- Insect
- Solenopsis fugax
- Gene Symbol
- ZFX
- Assembly
- GCA_003595255.1
- Location
- QKQZ01055907.1:450-5816[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.6 2.4e+02 3.3 0.1 3 23 15 35 14 35 0.94 2 15 3.1 4.7e+02 2.4 3.8 1 23 950 973 950 973 0.81 3 15 0.00013 0.019 16.2 1.9 3 23 1062 1083 1060 1083 0.96 4 15 0.0028 0.42 12.0 0.2 2 23 1096 1117 1096 1117 0.98 5 15 1.8e-05 0.0026 18.9 2.3 2 23 1120 1141 1119 1141 0.97 6 15 0.0022 0.33 12.3 0.3 1 23 1147 1169 1147 1169 0.96 7 15 4.3e-05 0.0064 17.7 4.3 2 23 1176 1197 1175 1198 0.95 8 15 0.11 16 7.0 3.7 5 23 1211 1229 1210 1229 0.97 9 15 2.2e-05 0.0033 18.6 1.5 3 23 1236 1257 1235 1257 0.97 10 15 0.0099 1.5 10.2 0.3 2 23 1273 1293 1272 1293 0.97 11 15 6.6e-05 0.0099 17.1 0.7 1 20 1299 1318 1299 1321 0.92 12 15 8.2e-05 0.012 16.8 2.7 1 23 1329 1351 1329 1351 0.99 13 15 0.0023 0.35 12.2 3.2 1 23 1357 1379 1357 1379 0.97 14 15 4.2e-06 0.00063 20.9 3.9 1 23 1385 1407 1385 1407 0.99 15 15 0.0014 0.22 12.9 6.3 1 23 1413 1435 1413 1436 0.96
Sequence Information
- Coding Sequence
- ATGGAGCTCCACGGTGCGGGATTGCCCGTCGGGGCCGTGGCCTGTCCTGTGTGTACCCTGTATCTGCGTGAGGGTATCAGTCTGCAAAAGCATCTGGACACTCATCCCAAGGAACAGGTTATAGATGCTCTCATCAAAGCCAGCGCCTCCTCGTTACAGacgcaacaacaacaacagcagcagcagcagcaagcTCTGCCAGCAGGAGCATCACTACCATTATCACTGCAGCCGCAGGCTGCGCTTCAGACCCCTAGCTCCATTCAGGCGCCCCAGGCGTCCTCCCAGGTCTCGCAGAACGCACACATTTCTACTCACTCCCCGTATCCCGTAGGACCCATCTTCGAATGTCCGCCCATAAGCACCATGATGCCACCGCAGTTCACCTCCTTCAGCTATCAGCAATTTGTGAACAATGGGACCATGATGATACCGCAGTATGCGATGGCGCCGCAAACCAATCAGATGATGCAGATGCTGTACAATCCATATGGTATGTACCAACAGCAAATTCCCACCGTCCAAATGATCTCACCAGTTGCAGCTATTCCTggcgcgacgacgacgacgagggtCCGACCAGTGGTCACCATGGCCGGGGAGAGCAACGTCAGGACCCTGACGGTCCCTGTAAATAGTCCCGAGCCAAAGCAGATTCTGCCAGAGATCTTGCCGGAGGCGGAACCCGAGTCCGGGCAAGTTACGCCAGACGTAAGCCTCTCGGCGTCGCCCGTGCTGGCGAGCGAAGACGCGTCTGTCAGGACGAGGGAGGAGGGCGACTGCGGCGCGCTGTCGATTGATCACCGAGGACAGACGCGGACCTCCACGTCTCCCGGCGACGGCACGATGCAGCATGAATATAACGCTATTCCCAGATCTATTACAATCGCCTGCGCTATAGATAACGCCGACAAAGTGGAGAGCGTATTGCCGGACGTGATAGACGAGGAGGCGTCGAGCATCGTTCCGACCGCGGACTTACAGTGCAAAACTGTCACGTACGAGCAGCCAGAAACACAACAGTTTACACAGCAGGTCATCGAGGAGGGATACGTGAGCGTATCCAGGAAAACGCCGAATGGGACAGCCGACATCGATTCCGTGGCTTGTGAGTCGGAAATGATGAGTGACGACAGACCCGCGAGTCGCAGCAGCAACATAAACAGCAACGTCGGCTCGCCGCGGGATCTGATAGCAATAGATGCGTTGAAGGATTCTGTTCAGCCCGAGCTTAACTCTGTAGAGAAACTGGAGAATCTGATCACCATAATGGAGACGGAGCTCAATAACGCTTCGCTTCAGAAAGAAAGTAATACGTCAAGTGATCAGGAGAGTTTGGACGCGAAGGAGAAGGACGAGGTGGTGGACAGAGAGGAGAGCGTAATTCACGACACGGTGGTCACGATCCCGGGCTCCCACGAGAAGGATCACATATTGCCCGACATACAGGAAGAGAATTACGTAACTAACGAACTGAGAATGCTGGAAAAATCTTGTAGTTCGTCATACAAAGTAGACTGTTCGAAAATAAACGAGGCACTAGAGAGATTGGAAAGAACTTTTCATTCagataattataagtatagtTTTTCAGCACCCGCGTCGCCGGTCGCGAGGAGGAAGAGCCGCAAGGCCGTGCAGCGTCGCTATAGCTCGCGATCGGAGCATGGATCATGCGAGAATCTTAGCATGTACCGTCACCGTGCCGGCTTCGACGACGCCGCGGCCATGCACGACGACGAAGAtgatgacgacgatgacgaagaCGACGAGGACGTAGACGAGGACGAGAAGATCGACGAGGAGGACAACTTCGACGAGGCGGACATGGAGATCGACGAGATTCCCAGTCCGCACACGCCTTTCGCGGACTGTGGCGTCCGATCGCACACGCCTTTGTCCACGATCAGTGGCATTTCCGTGTTAAGAGTCAGGAAGGATCTCAGCAAGCCGTGTTCACCTATGTCCATGCATTCGTTTCATCATGTGGACAGCGACAGCGTGACCCACGATGAGGATAGTAACGGTGTAGGCAGCATCTCAGAGAAAGATCCGATCGACTGTTCTCAggcggagaaagagaaaatcaaGACTGATCGTCAGCATCAGGAGAACGCGCAGGTGGCGGTGTGCGGAAGCGTCGCGAAGATTCAGGAGTCGAGCAGCAGTTACGCGTACCATCAGTCAGTGATAACCGAGCACATCAGTTCATTCCCCGTGATACACTCGCAATCGTCTGTCTTGATGCACGAGTCGTACTCCATCACGACGAGCACCAAGACGCAAAACCTCCTGAATCTCTCCGAGTCAATAAATCCCACGACCAGTACCGAATCCAGGAGCTTTCACTCGGCCAAGTCGTTGATGCCGAAGCAATCGATGGAACTGCTCAACATAAATGAAGATGCTCACGCCGGGCCAATGAATGTCTTTGAATTTGACGGACTGCAAATATTAGTTCCTAGTACGTTTATAAGTGACTCGTCCCAGAAAGCGGTGAGTGCGACCAGCCAGCAATCTATGGCGAGTAGCGAGGGTGCAATAGGTATCGATGAAGAGGTGAAGAGTATTAATATGCGCGCCGATGAGACCATGCCACCTAGGGGTGAATTGTCGGAACAAGAAAGTAATGGTTGCACGGAACAGTCTGCATGGCAGTTGTACATGGGTCAAGAATCGTCGCGCATGTCCACCTCTTACGATTTGTTGGCACGAGAAAGCTGGGAAGAATCAGAAGGATCCGACAACGAGATCAGCGGGCCGTTGTTGGATAGTAGATCATTGGCCACGCACTTTACTTCGAGCCTGTTTCTGGATCGGGATCGGAAAACACCGACTAAACGAACATTCAAGTGTTCCCATTGTAGCGAAGTGTTTGATTGCCCGAAGGAGCGTAGAGTTCACAGCACAACGGTGCACAAGGACGCAATGCCCAGTAGCAGTAGAGACCATTTGGATCAGCCGGAGGTGAAGGACATCAAGTTGCTGGATAGTCGCATGAATATGTTCGACGACATATTCATACCGAGTATACATATGCAACAACACATGTACCATCATCAGCAGCCGCTCTTGCATCAGCTGCAGCCACCGTCGCAGCCTGGATCGGACGGCCTGACGAAGGCCGAGGCCGACCAAAAAATTGGCGAAAATTTGGTGATACCGTCGAATATCGAGGTGATTTGCACGATATGCAATCAGCGTTTCAATAGCGAAAAGTCCTTGCAGGCGCATCACCGACGCATGCATATCGCCGATGTGAACAAACGCATACGCGAGACCGCCAAGTGCCAGATATGCAACGAGGAGTTTCCGTCAGTGTTCCTGTTCAACGCGCACCTGAAGATACATCCGTTAGAGTGTGGCCAGTGCGGCAAATATTTCTATCGCAAGCAGAACTTCAAGCTCCACATGAAACGTCACCTAGGCATCAAACCGTTCCCGTGTACCGTGTGCGATAAGGCGTTCCTCACCAAACAGAAGCTGGAGGAGCACACAAACGGCCACACCGGCAACGCGCCCGTCAGATGTAGTCTGTGCAACGAGACCTTTCGCAGATATTCGAATCTGACTCAGCACAAAAATAGGCATCATCTAAACATCAAGAAGAAGCTCAAGGACTATATATGTCACTGCGGTGAGGTGTTCCATACGAAGAAAAAGCTCGCATGGCATAAGGAGACGCACGACGAAAAGCCCAAGGCATGCACGTATTGCAACGAGCGATTTATCCACATGGCTAGCCTGACGCGCCACATGCGTCGCGCCCACAATCGCCGATTTGTTCCTGACGCTCAGCGCGAGAGCGAGAACGTTGAGTGTCCGATCTGCAAGTGTATCTATCTGCGATCGTCGCTGGCGGTGCATATGCGCGTGCACAATGGCGAGCGACCGTACGAGTGTCAAGTCTGCTCTAAGGCGTTCAGCACCAAGTGGAACCTGCAGCTGCACAAGTGGACGCACGCGGCGCGCAGTACCAAGCCGTTTAAATGTAATCAGTGCAGCGCGGCATTCTACCGTCACAGCGACTACACGGCGCACATGAATTCCCACCGGAACGTGCGACCGTACACTTGCAACTattgcggcgcgcagttcatCCGCAAGTACAACTGTCTGCGGCACGTGAAGGAGCACGAGGAGAACAAAGCGTATACGTGTGACGTGTGCAACAAGACCTTCCACCGCTCGTACTATCTCAAAGAGCATTTGCGGGTGCACTCGGGCGCGCGGCCGTACACATGTCACATCTGCGGCAAGTCGAGCGGCACCAAGTCCAATCACAACAAGCACGTGCGAATTCATCACGCGCGCGAGCCTGTAAATACCGAGAATTGA
- Protein Sequence
- MELHGAGLPVGAVACPVCTLYLREGISLQKHLDTHPKEQVIDALIKASASSLQTQQQQQQQQQQALPAGASLPLSLQPQAALQTPSSIQAPQASSQVSQNAHISTHSPYPVGPIFECPPISTMMPPQFTSFSYQQFVNNGTMMIPQYAMAPQTNQMMQMLYNPYGMYQQQIPTVQMISPVAAIPGATTTTRVRPVVTMAGESNVRTLTVPVNSPEPKQILPEILPEAEPESGQVTPDVSLSASPVLASEDASVRTREEGDCGALSIDHRGQTRTSTSPGDGTMQHEYNAIPRSITIACAIDNADKVESVLPDVIDEEASSIVPTADLQCKTVTYEQPETQQFTQQVIEEGYVSVSRKTPNGTADIDSVACESEMMSDDRPASRSSNINSNVGSPRDLIAIDALKDSVQPELNSVEKLENLITIMETELNNASLQKESNTSSDQESLDAKEKDEVVDREESVIHDTVVTIPGSHEKDHILPDIQEENYVTNELRMLEKSCSSSYKVDCSKINEALERLERTFHSDNYKYSFSAPASPVARRKSRKAVQRRYSSRSEHGSCENLSMYRHRAGFDDAAAMHDDEDDDDDDEDDEDVDEDEKIDEEDNFDEADMEIDEIPSPHTPFADCGVRSHTPLSTISGISVLRVRKDLSKPCSPMSMHSFHHVDSDSVTHDEDSNGVGSISEKDPIDCSQAEKEKIKTDRQHQENAQVAVCGSVAKIQESSSSYAYHQSVITEHISSFPVIHSQSSVLMHESYSITTSTKTQNLLNLSESINPTTSTESRSFHSAKSLMPKQSMELLNINEDAHAGPMNVFEFDGLQILVPSTFISDSSQKAVSATSQQSMASSEGAIGIDEEVKSINMRADETMPPRGELSEQESNGCTEQSAWQLYMGQESSRMSTSYDLLARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCSEVFDCPKERRVHSTTVHKDAMPSSSRDHLDQPEVKDIKLLDSRMNMFDDIFIPSIHMQQHMYHHQQPLLHQLQPPSQPGSDGLTKAEADQKIGENLVIPSNIEVICTICNQRFNSEKSLQAHHRRMHIADVNKRIRETAKCQICNEEFPSVFLFNAHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLEEHTNGHTGNAPVRCSLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01523563;
- 90% Identity
- iTF_00128452;
- 80% Identity
- -