Sfug004823.1
Basic Information
- Insect
- Solenopsis fugax
- Gene Symbol
- Hr39
- Assembly
- GCA_003595255.1
- Location
- QKQZ01054881.1:2366-7499[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.8 2e+04 -4.6 8.7 127 164 33 71 17 101 0.64 2 6 1.7 1.8e+04 -4.5 7.9 80 163 315 396 230 431 0.60 3 6 3 3.2e+04 -6.8 8.6 76 145 437 510 403 541 0.40 4 6 6.1e-08 0.00065 20.1 0.0 1 21 608 628 608 633 0.92 5 6 0.43 4.6e+03 -2.5 0.0 88 113 665 690 639 698 0.69 6 6 8.4e-71 9e-67 227.1 0.0 179 408 776 999 727 999 0.87
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGGCCAGGGCCCGGTTCAGATTCAACCTGGTGGCCAACCACGCAGTCTTGGAAATCGTCGGCGACCGCCTCGCTGTCAACCTCGTCGACTCCCACTTCGGCGACGGGTTCAGCGTCCGTCTCTGTCTCCTGCTCCGCGTCCAGCTCGTCCTCGACGAGCTCCTCCACCTCGACCAACTCGTCCGCGACTTGTTGCCCCTCGTCTTGCATCGGCGTGTCCTGCACGATGAGCCCAAGTCGTTCCACAGAAACGGGGAAAAACGTGTCCGTCACCACTATTAACGTACCGCCCAATCAAGAAATGCATGACGGTAAAGGGGTATGTAAATATCTCGGGGGACAGAACGGCGTGACGGTGTCGGTGGTATCGACCTCGGTACTGGGATGCGGAAACGCGAATGCCGTTCCGACAAGTGGAATCTGCACGAATACGGGGCCGCATAGTATCGGCATCGGAATCGGCGGCATCCTCGCTGCGAATGCGGCCGACATCGATGATCCCGAGGATAGCGACGGCGAGATCAGCAAGATTGACTTTAGGGGTGTCAATCTACGTTCGAAGAAGAAACGCGATATATCGGGTAATCAGAACGGCGACAAGATCGGCGATGGAGATGCAAACGGCGACGGTGGAGGATGCTGCGATGACAATTCGCAACAGCAGCCCGAGAGGCCTATGTCGTGGGAGGGTGAACTGTCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGGACCACAACGAGGAAACGTCTATGGAAGGAGTTCAAGTATGTAGTACGAGTCCTGGGCCCATGGAACAAAAGTTTCCTATTAAATCGGAACCGGATTTTCGATCTAGCCCAGGTTTTACAATAGGTTCCTTTCATGACGGTGGCTTACCCATAACACACAATCAACAAttgcagcaacagcaacaacaacaacgcgGTATCGAAAACCTCGAACAGACTCAACAGAGCGATCTACCGCTTCTCGTAGGCAAACTTCTCGGTGGATACAACAACTCAACGCCTAATCACAGTCCTGTTCTTAATCCGCGACATCATCTAACTAAACACAGTCATACTAGATCACAGGTGCCGTCACCAGATTCCGCCATTCATTCTGCGTATAGTGTCTTCAGTTCACCGACACAAAGTCCCCACGCGGCACGGCACTCCGCCCTAGGAGCGGGTAGTCCGATACCCTCCTCGTCGTTGTCCCTCTCTCGACACAGCTTCAACAATTCGACTTCCTCGTTATCTTTGTCGCTGTCGCATTCGCTTTCAAGGAACAACTCTGACGCTTCCAGTAGCTGCTACAGTTACGGCTCGCTTAGCCCGCCTACGCATTCACCCGTCCAGCAGCCGAGACATCCGCATTCGCATTCGCAACATCATCAGCATCAAGTTGCGCAAGGTAGTCCGCTGCATCTACCAGCCTCGTCCGCAATTGCCGCACATCATTACTCGTCCTCTTCCGTACCAGGCTCGGAACTGTCGCCGGACGGTCATCCCGTTGCGGAGGATCAGGAAGACTGTAGGATACCCTCAGCGCCGTCGGGTATCTCTACCAGGCAACAACTGATAAACAGTCCTTGCCCGATTTGCGGTGACAAGATAAGTGGCTTCCATTATGGCATATTTTCGTGTGAATCGTGCAAGGGATTCTTCAAGCGCACCGTCCAGAATCGTAAGAACTATGTGTGCCTTAGAGGGGCAGGTTGTCCGGTCACCGTGGCCACGAGGAAGAAGTGCCCAGCCTGTCGCTTTGAGAAGTGTCTCAATATGGGTATGAAACTCGAGGCGATTAGAGAGGATCGTACAAGAGGTGGTAGAAGCACTTATCAGTGTACCTATACTCTGCCAGCAAATCTCGTTGGTAGTCCTGCTGGCGGTATGACTAGTGAAAAATTAACGACGGCGGGCAATTGCAGCCCAGCACCGGTTGGTAGCGAGCATCATTATTCCATTAGATATCATTCAAATCATTCTCATAAGATGCAAGTACCTCAACTTTTGCAAGACATCATGGATGTGGAACATCTTTGGCATTATAACGACAATGATCGGATGAGCGGTAGTGGAGGAATACTTGGAAGTGTAAGAAATACCGGTGGTGACAGTATGCTCGGTGGACTCGGAAGTTGCCCGATGCCTAGCGGAACTGGAACCGCGACTGGCATTGGCACAGGAAACAACGGAGGTGCAGTGGAATGTTCGTCGAATGACTCTAACAATGTCGACACTAATAACAGAAGAGGAGAGACGTCGAGTCCCGCCAGTTCGACTTTAACGGGGGTGTCCGATCAACATTCCACAAATGGCAATACTACCAATAATAGTAATTCTCAAATTGCCAGTAATTCCAACGGCAATTCAGCGCAGCATCCGGACTTTTTATCTAATCTGTGCAACATTGCGGATCATCGGCTTTATAAGATTGTCAAGTGGTGCAAGAGTTtgccattatttaaaaatatctcgatCGACGATCAAATCTGTTTGTTGATCAACTCTTGGTGTGAACTACTACTTTTCTCCTGCTGTTTTCGAAGCATGAGCACTCCCGGTGAGATAAGAGTGTCTCTTGGCAAGTCGATTACTCTAGAACAAGCAAGACAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTTGCTTTTACTGACAATCTGCGAAGGCTGAGAGTAGACCAATACGAATATGTTGCAATGAAGGTGATCGTGCTGTTAACGTCCGATACGAGTGAATTAAAAGAACCTGAGAAGGTCAGAGCTTCTCAGGAAAAGGCCCTTCAAGCACTGCAGGAATACACAATCGCGAGGTACCCAGAATTACCCGCCAAATTTGGAGAACTATTGTTGAGAATTCCAGATCTTCAAAGAACATGTCAAGCAGGAAAAGAATTACTCAGTGCAAAACGCGCCGAAGGAGAAGGCAGCTCGTTTAACCTTTTAATGGAATTGTTGAGAGGAGATCATTGA
- Protein Sequence
- MSEQNGPSEGPGPGPGSDSTWWPTTQSWKSSATASLSTSSTPTSATGSASVSVSCSASSSSSTSSSTSTNSSATCCPSSCIGVSCTMSPSRSTETGKNVSVTTINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNANAVPTSGICTNTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDISGNQNGDKIGDGDANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFTIGSFHDGGLPITHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQHQVAQGSPLHLPASSAIAAHHYSSSSVPGSELSPDGHPVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFEKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMTSEKLTTAGNCSPAPVGSEHHYSIRYHSNHSHKMQVPQLLQDIMDVEHLWHYNDNDRMSGSGGILGSVRNTGGDSMLGGLGSCPMPSGTGTATGIGTGNNGGAVECSSNDSNNVDTNNRRGETSSPASSTLTGVSDQHSTNGNTTNNSNSQIASNSNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTDNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQEYTIARYPELPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267641;
- 90% Identity
- iTF_00885153;
- 80% Identity
- iTF_01354688;