Sfug019220.1
Basic Information
- Insect
- Solenopsis fugax
- Gene Symbol
- ttk
- Assembly
- GCA_003595255.1
- Location
- QKQZ01080676.1:1-3354[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-06 0.0025 18.3 0.0 8 38 131 161 124 167 0.71 2 4 8.9e-12 1.7e-08 34.9 0.0 4 39 177 211 175 218 0.85 3 4 0.1 2e+02 2.6 0.0 21 35 245 259 231 265 0.79 4 4 9.5e-11 1.8e-07 31.6 0.1 4 39 289 324 286 328 0.93
Sequence Information
- Coding Sequence
- gaAGTGCTCAGTCAAGTGACAGAAGATTATCCAACGATTATTCTAAGCGATATATCTCCTGAAGATATAAAATCGATTATCGAATTCATATATCATGGTGAAATCCGTGTTCCTgtcgaaaatattaatagtttacTTGAAGCTGCacgatcattaaaaataagcgGTCTTATCGAcATAGATGGAGTTGGGGAAAACGAAATTGTTAGAAGCAAAAATTCTGTAGAAGAGGCTGTGATAGAGGCAGGGGAAATTGAGAACAATGTTGAACAATCTTTGGAGAATGACTCGCACGAACAAAATACGGctgaaaattgtatttcaaataaaaagaaaaaacgtcGTCGCGAGACTGTTAAAAGAGATTACAATGATGACATGTTGGCATCCGCAATTAATGATTTGAAATTAGGACAAACTTTAATAGAAGCTGCCACTAAGCACAATATACCACGCTCGACGTTGTATATGCGGGCGAAAGCATTAGGCATACATTTAAACGCGTCGCGGAATGGATATCCCACAGAATGCATGAATGCAGCTATAAATGCCGTAATCAatGGTTCGAGCTTACAGCACGCATcggaaatatttagaataccGAAAACCGTGTTATGGAGGCGTATACAAAAGGAGGGCTATCAGACCATTCGCCCTGAAATGAAGAGGTCATATGCTTTAGACACTAGAGAGGCTGCTGTTAAAGCTTTAGAAAGAGgagaaaatttaacaaaagttgCTCTGGAATTTAAAATACCAAAGACTACATTGTTTAGAGAAAAAGCACGGTTAGTAGATCAAGGTAAATTGCCGTTATCATTTTGGAAAAAGCGCAAAACTGAGAAtgaggaattaaaaaaatcgcgaTTAGAAGAAGCTGTAGCTGCCTGTAAAGGTGGTAGAATGTCGCAGGCTGCAGCATCTATGACATATCATATTCCAAAAACTACGATATGGCGAAGACTTCAACAAGATGGAAAAAAAGCAGAAAAGTTGAATGCAAAGAAACAACGAATGACTGAAACATCAGTACTACATGATGCTCAGGTGAAAATGCAAGAAACGTCCAATTTCAGTTATTGCGAGGTTGCATCAGAAATACCTATAACTTATATAGATGAAGACAGTATACCTGAGGATTCCGTGATAATCTTAACAACAGAGGAAATGGACGAATTGAATTTAGAGGGAGAAAgacaaattattgtaaattcggaATCTGGACAGGAATATATTCCGTGCACGATCAGTatcgaaaataattcaaaCTATTCGGAGGCTGAGAGTTAG
- Protein Sequence
- EVLSQVTEDYPTIILSDISPEDIKSIIEFIYHGEIRVPVENINSLLEAARSLKISGLIDIDGVGENEIVRSKNSVEEAVIEAGEIENNVEQSLENDSHEQNTAENCISNKKKKRRRETVKRDYNDDMLASAINDLKLGQTLIEAATKHNIPRSTLYMRAKALGIHLNASRNGYPTECMNAAINAVINGSSLQHASEIFRIPKTVLWRRIQKEGYQTIRPEMKRSYALDTREAAVKALERGENLTKVALEFKIPKTTLFREKARLVDQGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGRMSQAAASMTYHIPKTTIWRRLQQDGKKAEKLNAKKQRMTETSVLHDAQVKMQETSNFSYCEVASEIPITYIDEDSIPEDSVIILTTEEMDELNLEGERQIIVNSESGQEYIPCTISIENNSNYSEAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423555;
- 90% Identity
- iTF_01354753; iTF_01355543; iTF_01355223; iTF_01015964; iTF_01015715;
- 80% Identity
- iTF_01354753;