Mpha007467.1
Basic Information
- Insect
- Monomorium pharaonis
- Gene Symbol
- ttk
- Assembly
- GCA_013373865.1
- Location
- CM023799.1:2142994-2147798[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.5e-06 0.0029 18.1 0.0 8 38 194 224 187 230 0.71 2 4 1.1e-11 1.2e-08 35.2 0.0 4 43 240 279 238 281 0.86 3 4 0.11 1.3e+02 3.1 0.0 21 35 308 322 294 328 0.80 4 4 3e-11 3.5e-08 33.8 0.1 4 39 352 387 349 391 0.94
Sequence Information
- Coding Sequence
- ATGACCGACGCTAgccaatgtaaaattaaccAGAGTTATCGTTTTAAATGGAACAATTATCAAAATCATCTATCTGACGTTGTGCGACAGCTTTTGGAAGAGGACTGCATGGTGGATGTCACTCTATCTGCAGCTGGTCAACGTATTCACGCACATCGCATTGTATTATGCGCATGTAGCATTTTGTTTCAAGAAGTGCTGAGTCAAGTGACGGAAGATTGTCCAACAATTATTCTAAGTGATATATCTCCTCAGGATATAAAATcgattattgaatttatatatcacgGTGAGATCCGTGTTCCTGTCGAAAATATTAGCAGCTTACTTGAAGCTGCACGATCGTTAAAAATAAGCGGTCTTATCGATATAGATGGAGTTGGAGAAAACGAAATTGTTGGGAGCACAAATTCCGTGGAAGAGACTATAACAGAAGCAGAGGAAATTGAGAATAATGTTGACCTTTTGGAGAATGACTCGAATGAATCGAACACTCCcgacaattatatttcaactaaaaagaaaaaacgtcGCCGCGAGACTGTGAAAAGAGATTACAATGACGACATGTTGGCATCTGCGATTAATGACTTGAAATTGGGGCAAACTTTAATAGAAGCTGCAACCAAGCACAATATACCACGTTCAACATTGTACATGCGGGCGAAAGCATTAGGCATACATTTAAATGCATCCAGAAATGGATATCCCGCAGAGTGCATGAACGCAGCTATAAATGCCGTAATCAatggTTCAAGTTTACAGCATGCatcagaaatatttagaataccTAAAACCGTGTTATGGAGACGTATACAAAAGGAGGGCTATCAGACCCTTCGTCCTGAAATGAAGAGATCATATGCTTTAGATACAAAAGAGGCTGCTGTTAAAGCTTTAGAAAGAGGGGaaaatttgacaaaagttGCTATGGAATTTAAAATACCAAAGACTACATTATTTAGAGAAAAGGCACGGCTAGTAGATCAAGGTAAATTACCGTTATCGTTTTggaaaaaacgaaaaactgaaaatgaagaattaaaaaaatcgcgaCTGGAAGAAGCTGTAGCTGCTTGTAAAGGCGGCAAAATGTCGCAGGCTGCAGCATCTATGACATATCACATTCCAAAAACTACGATATGGCGAAGACTTCAACAAGATGGAAAGAAAGCGAAAAGATCATCGAATTCGAAAAAGCAGCAACGAATGATTGAGACGCCAGTATTGCACGATCAGAAAATGCAAGAAACGTCCAATTTTAGTTATTGCgagGCTGCATCGGAAATACCTATAACTTATATCGATGAGGACAGTATACCTGAGAATTCCGTGATAATCTTAACAACGGAAGAAATGAATGAACTGAATTTAGAGGGAGGCAGACAAATTATTGTGAATTCgGAATCCGGACAGGAATATATCCCATGTACGATAAGTATCGAAAATAACTCAAACTATTCAGAGGCTGAGAGTTAG
- Protein Sequence
- MTDASQCKINQSYRFKWNNYQNHLSDVVRQLLEEDCMVDVTLSAAGQRIHAHRIVLCACSILFQEVLSQVTEDCPTIILSDISPQDIKSIIEFIYHGEIRVPVENISSLLEAARSLKISGLIDIDGVGENEIVGSTNSVEETITEAEEIENNVDLLENDSNESNTPDNYISTKKKKRRRETVKRDYNDDMLASAINDLKLGQTLIEAATKHNIPRSTLYMRAKALGIHLNASRNGYPAECMNAAINAVINGSSLQHASEIFRIPKTVLWRRIQKEGYQTLRPEMKRSYALDTKEAAVKALERGENLTKVAMEFKIPKTTLFREKARLVDQGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKAKRSSNSKKQQRMIETPVLHDQKMQETSNFSYCEAASEIPITYIDEDSIPENSVIILTTEEMNELNLEGGRQIIVNSESGQEYIPCTISIENNSNYSEAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423555;
- 90% Identity
- iTF_01354524;
- 80% Identity
- iTF_01015964;