Basic Information

Insect: Sogatella furcifera
Gene Symbol: -
Assembly: GCA_014356515.1
Location: chr4:21147288-21161051[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.017 24 5.3 0.2 20 45 214 239 205 246 0.87

2 11 1.4 2e+03 -0.8 0.1 21 44 243 266 239 269 0.82

3 11 1.2e-05 0.017 15.5 0.3 23 50 301 328 296 331 0.90

4 11 0.0026 3.6 8.0 0.5 21 52 540 571 531 573 0.90

5 11 1.6e-05 0.022 15.1 1.0 23 50 626 653 615 656 0.88

6 11 0.0069 9.6 6.6 0.1 21 47 898 924 892 931 0.88

7 11 3.6 5e+03 -2.1 0.0 22 43 927 948 924 951 0.86

8 11 9.8e-05 0.14 12.5 0.1 23 49 984 1010 978 1014 0.90

9 11 0.019 26 5.2 0.0 21 52 1270 1301 1262 1302 0.86

10 11 0.041 58 4.1 0.1 23 43 1300 1320 1294 1326 0.83

11 11 1.5e-05 0.021 15.1 0.0 20 48 1353 1381 1350 1384 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.017	24	5.3	0.2	20	45	214	239	205	246	0.87
2	11	1.4	2e+03	-0.8	0.1	21	44	243	266	239	269	0.82
3	11	1.2e-05	0.017	15.5	0.3	23	50	301	328	296	331	0.90
4	11	0.0026	3.6	8.0	0.5	21	52	540	571	531	573	0.90
5	11	1.6e-05	0.022	15.1	1.0	23	50	626	653	615	656	0.88
6	11	0.0069	9.6	6.6	0.1	21	47	898	924	892	931	0.88
7	11	3.6	5e+03	-2.1	0.0	22	43	927	948	924	951	0.86
8	11	9.8e-05	0.14	12.5	0.1	23	49	984	1010	978	1014	0.90
9	11	0.019	26	5.2	0.0	21	52	1270	1301	1262	1302	0.86
10	11	0.041	58	4.1	0.1	23	43	1300	1320	1294	1326	0.83
11	11	1.5e-05	0.021	15.1	0.0	20	48	1353	1381	1350	1384	0.91

Sequence Information

Coding Sequence: ATGCATCTTTCCCGTATGATTATGGTGGTGAGAAAAGATACTAATCGAATGCAGTTGATTTCATTTGTTTTGCATATGAATGGAAATGTCAAAACATTGGAACTATCGACTGATTTTCCAGAGAGCTCTGACTTTAAGGGAAACCAAATTGTTATCAAGGAAGTAGTGAAACACGTGAGGCAGAAAAATAAATTAAAATATGATGACACTTTAGTTGTTAAAGTGAAATCCACTCATAGAAACAAGGCTAATGAATCAGAAGCAAAAAATGCTTTTATGCGTAAAATTGACATGGAAGCTAAAAAGTTGAATTCAGCTACTGTTGGACCTGGATACCATTGTAAAGATTGTAATTTGAGGTATAGACACAAGCATAATTTTGATTTGCATATGAAAACTCATGAATCTGATAGCAAATCAAATGCTGAAGAATCGGGACTTGTTTCTAATGAAGATGAACAACAGTTGAAAATGAACAATAACCTATACTGCGAAAAGTGCAACAAACACTTGATGTCAAGAGGTGGCTTGAGATATCACATGAAACACTTTCACCTTGGTGTGAAGAATCATGCTTGCGACATTTGTGGGCAACGTTTTGCCCAGAAAAGAACAATGATGGAGCATAGACGCATCCACACGGGAGAGCGGCCCTTCGTGTGCCAGGTGTGTGGCAAGGCAGTGCGCACTTCCGCCATTCTCTACAAGCACCTCCAGTCTCACAGCACTGAACGGCCCTACAGTTGTTCAAGCTGTCAAAAAACATTCAAGTACTCTCATCAACTTGCGGAGCATGCTAACGTACATACTGGACAAAGGAACTATATCTGTGAATTATGTGGAAAGAGCTTTACTACAAGAAAATGCTTTGCAAGACACATGATGACCCACAATGGTTTGAAACCCTATCCATGCCCTTTGTGTAATTCAACATTCAATCAGAAACGCTATCTGAGACAACATCTTAATGGAAGACATAGCCTTGATCCAAGAGAAACTCGCAAAATTGTACAGAACACTCCAAAGCAAACGTTTTCTTTCGTTTTGCATTTGAATGGGAATGAAAAAACGTTGGAACTATCGACTGATTTTCCAGAGAGCTCTGACCTTGAGGGGAACCTAAATGTTATCAAGGAAGTTGTGAAACATGTGAGGAAAAGAAATAACTTGATAGATGGTGAGACTTTAAATGTTAAGGTGAAATCCACTCGTAGTAAAAATACATATGAATCAGAAGGAAACAATGATGTGATGCATAAAATGTACACGGAAGCTAAAAACTTGAAATCAACTACTACTGGACATGGCTACTATTGTAGAGATTGTGATTTGAGGTATAAACACAAGCATAATTTTGAAGCGCATATGAAAACTCATATATCTGCTAACAAATCAACAGATGAAGTATCGGAACCGCGTTCCAATGAAGATGGACAACAATTGAAAACTAAAAAAACCATACACTGTGAAAAGTGTAACAAATACTTTACGTCGAAAAGTACTATAAGAATGCACATGAGACATACTCACTATGGTGTAAAAAAGTATGTTTGCGAGTTTTGTGGGAAACGCTTTGTCCTGGAAGGATTAATGAAGGAGCACAGGCGCATCCACTTGGACGAGCGGCCTTTTGTATGCCAGGTGTGTGGCCATGCAGCGAAGACATCTTCCGCCCTCAGGTCGCATCTCAGGTTGCACAGTGATGCACGTCCCTTCAGTTGTTCAACCTGCCAAAAAGCATTCAAGTTTTCTCATCAACTTACGGCTCATCATACCGTACATACTCAAGAAAAAAAATACGTCTGTGACACATGTGGAAAGGCCTTTACTAGACCAAATGTTTTACAAAGACACATACAGAGCCACACTGATTTGAGACCCTACCAGTGCCCTTTGTGCACTTCAACATTCAGTCAGAAACGCTATTTGAGACAACATCTGAATGGAAGACATAACCTTGATCCAAGAGAAACCAACCTAATTGTACAGAACATTGAAAAGCAAGTGACCAAACATGATCAGGACATTCCAGTGAACGACACTGTAGATGCACACAATCTTTTGAAAAACGAGATCATGGTGCTGAGAAAAGATAATAATCAAATGCAGACGTTTTCTTTCGTTTTACATATGAATGGAAATGAAAAAGCGTTGGAACTATCGACTGATTTTCCAGAGAGCTCTGACTTTGAGGGAAATCTAATAGTTATCAAGGAAGCTGTGAAACTTGTGAGGCAGAAAAATAGATTAAAAGATGATGACACTTTAGTTGTTAAAGTCAAATCTACGCATAGAAATGATGCTAATAAATCAGAAGGAGAATATGATTTCATTGATAAAATTGATAAGGAAGCAGAAAATATAAATTCTGCCACTACTGGACCTGGCTACTATTGTAAAGATTGTAATTTGAGGTATAGACGCAAACGTTCTTTTGATATCCATATGAAAACTCATGACCCTGGTAACAAATCGAAAGAATCGGAACTACTTTCCAATAAAGATGAACAACAATTGAAAACTAAAAATAACCTTTACTGTGAAAATTGCAACAAATGCTTTACTTCAAGAAGTGGTTTGAGATATCACATGAGACACAATCACCTTAGCGAGATAAAGCATGCTTGCGAATTCTGTGGGCAATGCTTTGCCCAGAAAGGAGAAATGATGGTGCACAGACGCATCCACACGGGCGAGCGGCCCTACATATGCCAGGTGTGTGGCAAGGCTGTGCGCACTTCGAACCTTCTCAACTCGCACCTTAAGTTGCACAGTGATGAACGACCTTACAGCTGTCAAACTTGCAACATGACATTCAAGTTTTCACATGCTCTTTTCAAGCATAATCGTGTTCATACAGGCGAGAGAAACTATGTTTGTGAATTATGTGGAAAGGGGTTTGCTAGTAGAACATGTTTGAAAAGACACATGATGAGCCACACTGGATTGAAACCCTACCCATGCCCTTTGTGCAGTTCAACATTCAATCAGAAACGCTATTTGAAACAGCATCTGAGTAACAGACATGGCCTGGATCCAAGAGAAGCTTGCACAATTGTACAAAACATAGAAAAGCAAGAGATCAAACCAACAGTTGATGACAAACATCATCAGGATATCCCAGTCAACGACACTGTAGATGCTCTCGATCTCTTGCAAAACGTGGAAGTTGAAATTAATGAAACTGAAGAAGCTTTAGACGGGAAGTTTTCTTTCGTTTTGCATATGAATGGAAATGGAAGAACATTGGAAATATTGAATGATTTTCCTGAGAGCTCTGACTTGAAATACAAACAGTCTATCATTAAGGAAATAGTGAAACATGTGAGGCAGAAAAATGGATTGAAAGACTATGAAACAGTGGTAGTTAAAATGAAATCTACTCAAAGAGAGAAGGGTAACGAATCTGAAAGAAAACGTGATTCTATGCATACTTTTGATATGGGAAGTAAACCCCCAATTCCAGCTAATTCTGGTTTCTATTGTAAAGAATGTAAAGTGAGGTACAGAAACAAGCATAATTTTGATGAACATATGGAAAATCATAAATCTGGAAACATTTTGAATGTTGAAGAGACAATCATGAACATTAATGATGGAGCAACACAGAATAAACGCATACGCAAAAAAGAACCTCAAAAAGAAGTGTACTGTGAAAAATGCAACAAACACTTGTTAATTACACGGAGTGGCTATAGATATCACATGAAATACTTTCATCTTGGTGTGAAAAAGCATGCTTGCGATATTTGTGGGCGAAATTTTGCCATGAAAGGAGCAATGATGGAGCACAGACGCATCCACACGGGCGAGCGGCCCTTTGTGTGCCAGGTGTGTGGCAAGGCAGTGCGCACTTCCGGCATGCTCTACGAGCATCTTCAGTCGCACAATGATGCACGTCCCTTCAGTTGTCCAATCTGCCACAAAACGTTCAAGGTCAAAAGTCACCTTAGAGGACATAAACTCGTGCATACTGGAGAAAGAAAATATGTGTGTGAGTTATGTGGAAAGGGATTTCTACAAAGAAATGAAATGAAAAACCACATCATGACTCACAATAGTTCAAAACCTTTCCCATGCCCAATATGTGATTCGAAATTCAATCAGAAACGATATTTGAGACAGCATCTGCATGGAAAACATGACTTTGATTCAAAAGAAGCCTGCTCAGTTGCACAGGATATTGTACAGCTTGTATCTGTCTCATCAACAGAACAGCATCACATCAAGACATCAGTGAAGGAACCACACTTGCCCATTACTTGA
Protein Sequence: MHLSRMIMVVRKDTNRMQLISFVLHMNGNVKTLELSTDFPESSDFKGNQIVIKEVVKHVRQKNKLKYDDTLVVKVKSTHRNKANESEAKNAFMRKIDMEAKKLNSATVGPGYHCKDCNLRYRHKHNFDLHMKTHESDSKSNAEESGLVSNEDEQQLKMNNNLYCEKCNKHLMSRGGLRYHMKHFHLGVKNHACDICGQRFAQKRTMMEHRRIHTGERPFVCQVCGKAVRTSAILYKHLQSHSTERPYSCSSCQKTFKYSHQLAEHANVHTGQRNYICELCGKSFTTRKCFARHMMTHNGLKPYPCPLCNSTFNQKRYLRQHLNGRHSLDPRETRKIVQNTPKQTFSFVLHLNGNEKTLELSTDFPESSDLEGNLNVIKEVVKHVRKRNNLIDGETLNVKVKSTRSKNTYESEGNNDVMHKMYTEAKNLKSTTTGHGYYCRDCDLRYKHKHNFEAHMKTHISANKSTDEVSEPRSNEDGQQLKTKKTIHCEKCNKYFTSKSTIRMHMRHTHYGVKKYVCEFCGKRFVLEGLMKEHRRIHLDERPFVCQVCGHAAKTSSALRSHLRLHSDARPFSCSTCQKAFKFSHQLTAHHTVHTQEKKYVCDTCGKAFTRPNVLQRHIQSHTDLRPYQCPLCTSTFSQKRYLRQHLNGRHNLDPRETNLIVQNIEKQVTKHDQDIPVNDTVDAHNLLKNEIMVLRKDNNQMQTFSFVLHMNGNEKALELSTDFPESSDFEGNLIVIKEAVKLVRQKNRLKDDDTLVVKVKSTHRNDANKSEGEYDFIDKIDKEAENINSATTGPGYYCKDCNLRYRRKRSFDIHMKTHDPGNKSKESELLSNKDEQQLKTKNNLYCENCNKCFTSRSGLRYHMRHNHLSEIKHACEFCGQCFAQKGEMMVHRRIHTGERPYICQVCGKAVRTSNLLNSHLKLHSDERPYSCQTCNMTFKFSHALFKHNRVHTGERNYVCELCGKGFASRTCLKRHMMSHTGLKPYPCPLCSSTFNQKRYLKQHLSNRHGLDPREACTIVQNIEKQEIKPTVDDKHHQDIPVNDTVDALDLLQNVEVEINETEEALDGKFSFVLHMNGNGRTLEILNDFPESSDLKYKQSIIKEIVKHVRQKNGLKDYETVVVKMKSTQREKGNESERKRDSMHTFDMGSKPPIPANSGFYCKECKVRYRNKHNFDEHMENHKSGNILNVEETIMNINDGATQNKRIRKKEPQKEVYCEKCNKHLLITRSGYRYHMKYFHLGVKKHACDICGRNFAMKGAMMEHRRIHTGERPFVCQVCGKAVRTSGMLYEHLQSHNDARPFSCPICHKTFKVKSHLRGHKLVHTGERKYVCELCGKGFLQRNEMKNHIMTHNSSKPFPCPICDSKFNQKRYLRQHLHGKHDFDSKEACSVAQDIVQLVSVSSTEQHHIKTSVKEPHLPIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01353954;
90% Identity: iTF_01353954;
80% Identity: iTF_01353954;