Basic Information

Insect: Sogatella furcifera
Gene Symbol: -
Assembly: GCA_014356515.1
Location: chr4:21147288-21161051[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.013 0.69 10.7 9.9 1 23 112 134 112 134 0.98

2 27 0.24 12 6.8 4.7 2 23 163 185 162 185 0.95

3 27 0.00023 0.012 16.3 1.2 1 23 191 213 191 213 0.96

4 27 0.0035 0.18 12.5 0.1 1 23 219 241 219 241 0.98

5 27 0.00044 0.023 15.4 2.4 1 23 247 269 247 269 0.98

6 27 2.6e-06 0.00013 22.4 3.5 1 23 275 297 275 297 0.98

7 27 0.00025 0.013 16.1 1.0 1 23 303 326 303 326 0.95

8 27 0.00016 0.0082 16.8 6.7 1 23 437 459 437 459 0.99

9 27 0.005 0.26 12.1 6.1 2 23 488 510 487 510 0.95

10 27 0.00048 0.025 15.2 0.3 1 23 516 538 516 538 0.98

11 27 0.00018 0.0094 16.6 0.5 1 23 544 566 544 566 0.98

12 27 0.0017 0.086 13.6 5.7 1 23 572 594 572 594 0.97

13 27 9.8e-07 5.1e-05 23.7 0.2 1 23 600 622 600 622 0.98

14 27 0.00017 0.0089 16.7 1.7 1 23 628 651 628 651 0.96

15 27 0.00025 0.013 16.1 3.8 1 23 797 819 797 819 0.99

16 27 0.00012 0.006 17.2 6.0 2 23 846 868 845 868 0.95

17 27 0.00031 0.016 15.9 2.0 1 23 874 896 874 896 0.96

18 27 0.0001 0.0054 17.3 0.2 1 23 902 924 902 924 0.97

19 27 0.0024 0.12 13.1 4.9 1 23 930 952 930 952 0.98

20 27 2.2e-06 0.00012 22.6 1.7 1 23 958 980 958 980 0.98

21 27 0.0012 0.063 14.0 1.6 1 23 986 1009 986 1009 0.95

22 27 0.0074 0.38 11.5 4.4 1 23 1160 1182 1160 1182 0.97

23 27 0.00079 0.041 14.6 0.3 1 23 1246 1268 1246 1268 0.96

24 27 0.00021 0.011 16.4 0.1 1 23 1274 1296 1274 1296 0.98

25 27 2.9e-05 0.0015 19.1 4.2 1 23 1302 1324 1302 1324 0.97

26 27 0.00044 0.023 15.4 0.3 1 23 1330 1352 1330 1352 0.99

27 27 0.00084 0.043 14.5 2.3 1 23 1358 1381 1358 1381 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.013	0.69	10.7	9.9	1	23	112	134	112	134	0.98
2	27	0.24	12	6.8	4.7	2	23	163	185	162	185	0.95
3	27	0.00023	0.012	16.3	1.2	1	23	191	213	191	213	0.96
4	27	0.0035	0.18	12.5	0.1	1	23	219	241	219	241	0.98
5	27	0.00044	0.023	15.4	2.4	1	23	247	269	247	269	0.98
6	27	2.6e-06	0.00013	22.4	3.5	1	23	275	297	275	297	0.98
7	27	0.00025	0.013	16.1	1.0	1	23	303	326	303	326	0.95
8	27	0.00016	0.0082	16.8	6.7	1	23	437	459	437	459	0.99
9	27	0.005	0.26	12.1	6.1	2	23	488	510	487	510	0.95
10	27	0.00048	0.025	15.2	0.3	1	23	516	538	516	538	0.98
11	27	0.00018	0.0094	16.6	0.5	1	23	544	566	544	566	0.98
12	27	0.0017	0.086	13.6	5.7	1	23	572	594	572	594	0.97
13	27	9.8e-07	5.1e-05	23.7	0.2	1	23	600	622	600	622	0.98
14	27	0.00017	0.0089	16.7	1.7	1	23	628	651	628	651	0.96
15	27	0.00025	0.013	16.1	3.8	1	23	797	819	797	819	0.99
16	27	0.00012	0.006	17.2	6.0	2	23	846	868	845	868	0.95
17	27	0.00031	0.016	15.9	2.0	1	23	874	896	874	896	0.96
18	27	0.0001	0.0054	17.3	0.2	1	23	902	924	902	924	0.97
19	27	0.0024	0.12	13.1	4.9	1	23	930	952	930	952	0.98
20	27	2.2e-06	0.00012	22.6	1.7	1	23	958	980	958	980	0.98
21	27	0.0012	0.063	14.0	1.6	1	23	986	1009	986	1009	0.95
22	27	0.0074	0.38	11.5	4.4	1	23	1160	1182	1160	1182	0.97
23	27	0.00079	0.041	14.6	0.3	1	23	1246	1268	1246	1268	0.96
24	27	0.00021	0.011	16.4	0.1	1	23	1274	1296	1274	1296	0.98
25	27	2.9e-05	0.0015	19.1	4.2	1	23	1302	1324	1302	1324	0.97
26	27	0.00044	0.023	15.4	0.3	1	23	1330	1352	1330	1352	0.99
27	27	0.00084	0.043	14.5	2.3	1	23	1358	1381	1358	1381	0.93

Sequence Information

Coding Sequence: ATGCATCTTTCCCGTATGATTATGGTGGTGAGAAAAGATACTAATCGAATGCAGTTGATTTCATTTGTTTTGCATATGAATGGAAATGTCAAAACATTGGAACTATCGACTGATTTTCCAGAGAGCTCTGACTTTAAGGGAAACCAAATTGTTATCAAGGAAGTAGTGAAACACGTGAGGCAGAAAAATAAATTAAAATATGATGACACTTTAGTTGTTAAAGTGAAATCCACTCATAGAAACAAGGCTAATGAATCAGAAGCAAAAAATGCTTTTATGCGTAAAATTGACATGGAAGCTAAAAAGTTGAATTCAGCTACTGTTGGACCTGGATACCATTGTAAAGATTGTAATTTGAGGTATAGACACAAGCATAATTTTGATTTGCATATGAAAACTCATGAATCTGATAGCAAATCAAATGCTGAAGAATCGGGACTTGTTTCTAATGAAGATGAACAACAGTTGAAAATGAACAATAACCTATACTGCGAAAAGTGCAACAAACACTTGATGTCAAGAGGTGGCTTGAGATATCACATGAAACACTTTCACCTTGGTGTGAAGAATCATGCTTGCGACATTTGTGGGCAACGTTTTGCCCAGAAAAGAACAATGATGGAGCATAGACGCATCCACACGGGAGAGCGGCCCTTCGTGTGCCAGGTGTGTGGCAAGGCAGTGCGCACTTCCGCCATTCTCTACAAGCACCTCCAGTCTCACAGCACTGAACGGCCCTACAGTTGTTCAAGCTGTCAAAAAACATTCAAGTACTCTCATCAACTTGCGGAGCATGCTAACGTACATACTGGACAAAGGAACTATATCTGTGAATTATGTGGAAAGAGCTTTACTACAAGAAAATGCTTTGCAAGACACATGATGACCCACAATGGTTTGAAACCCTATCCATGCCCTTTGTGTAATTCAACATTCAATCAGAAACGCTATCTGAGACAACATCTTAATGGAAGACATAGCCTTGATCCAAGAGAAACTCGCAAAATTGTACAGAACACTCCAAAGCAAACGTTTTCTTTCGTTTTGCATTTGAATGGGAATGAAAAAACGTTGGAACTATCGACTGATTTTCCAGAGAGCTCTGACCTTGAGGGGAACCTAAATGTTATCAAGGAAGTTGTGAAACATGTGAGGAAAAGAAATAACTTGATAGATGGTGAGACTTTAAATGTTAAGGTGAAATCCACTCGTAGTAAAAATACATATGAATCAGAAGGAAACAATGATGTGATGCATAAAATGTACACGGAAGCTAAAAACTTGAAATCAACTACTACTGGACATGGCTACTATTGTAGAGATTGTGATTTGAGGTATAAACACAAGCATAATTTTGAAGCGCATATGAAAACTCATATATCTGCTAACAAATCAACAGATGAAGTATCGGAACCGCGTTCCAATGAAGATGGACAACAATTGAAAACTAAAAAAACCATACACTGTGAAAAGTGTAACAAATACTTTACGTCGAAAAGTACTATAAGAATGCACATGAGACATACTCACTATGGTGTAAAAAAGTATGTTTGCGAGTTTTGTGGGAAACGCTTTGTCCTGGAAGGATTAATGAAGGAGCACAGGCGCATCCACTTGGACGAGCGGCCTTTTGTATGCCAGGTGTGTGGCCATGCAGCGAAGACATCTTCCGCCCTCAGGTCGCATCTCAGGTTGCACAGTGATGCACGTCCCTTCAGTTGTTCAACCTGCCAAAAAGCATTCAAGTTTTCTCATCAACTTACGGCTCATCATACCGTACATACTCAAGAAAAAAAATACGTCTGTGACACATGTGGAAAGGCCTTTACTAGACCAAATGTTTTACAAAGACACATACAGAGCCACACTGATTTGAGACCCTACCAGTGCCCTTTGTGCACTTCAACATTCAGTCAGAAACGCTATTTGAGACAACATCTGAATGGAAGACATAACCTTGATCCAAGAGAAACCAACCTAATTGTACAGAACATTGAAAAGCAAGTGACCAAACATGATCAGGACATTCCAGTGAACGACACTGTAGATGCACACAATCTTTTGAAAAACGAGATCATGGTGCTGAGAAAAGATAATAATCAAATGCAGACGTTTTCTTTCGTTTTACATATGAATGGAAATGAAAAAGCGTTGGAACTATCGACTGATTTTCCAGAGAGCTCTGACTTTGAGGGAAATCTAATAGTTATCAAGGAAGCTGTGAAACTTGTGAGGCAGAAAAATAGATTAAAAGATGATGACACTTTAGTTGTTAAAGTCAAATCTACGCATAGAAATGATGCTAATAAATCAGAAGGAGAATATGATTTCATTGATAAAATTGATAAGGAAGCAGAAAATATAAATTCTGCCACTACTGGACCTGGCTACTATTGTAAAGATTGTAATTTGAGGTATAGACGCAAACGTTCTTTTGATATCCATATGAAAACTCATGACCCTGGTAACAAATCGAAAGAATCGGAACTACTTTCCAATAAAGATGAACAACAATTGAAAACTAAAAATAACCTTTACTGTGAAAATTGCAACAAATGCTTTACTTCAAGAAGTGGTTTGAGATATCACATGAGACACAATCACCTTAGCGAGATAAAGCATGCTTGCGAATTCTGTGGGCAATGCTTTGCCCAGAAAGGAGAAATGATGGTGCACAGACGCATCCACACGGGCGAGCGGCCCTACATATGCCAGGTGTGTGGCAAGGCTGTGCGCACTTCGAACCTTCTCAACTCGCACCTTAAGTTGCACAGTGATGAACGACCTTACAGCTGTCAAACTTGCAACATGACATTCAAGTTTTCACATGCTCTTTTCAAGCATAATCGTGTTCATACAGGCGAGAGAAACTATGTTTGTGAATTATGTGGAAAGGGGTTTGCTAGTAGAACATGTTTGAAAAGACACATGATGAGCCACACTGGATTGAAACCCTACCCATGCCCTTTGTGCAGTTCAACATTCAATCAGAAACGCTATTTGAAACAGCATCTGAGTAACAGACATGGCCTGGATCCAAGAGAAGCTTGCACAATTGTACAAAACATAGAAAAGCAAGAGATCAAACCAACAGTTGATGACAAACATCATCAGGATATCCCAGTCAACGACACTGTAGATGCTCTCGATCTCTTGCAAAACGTGGAAGTTGAAATTAATGAAACTGAAGAAGCTTTAGACGGGAAGTTTTCTTTCGTTTTGCATATGAATGGAAATGGAAGAACATTGGAAATATTGAATGATTTTCCTGAGAGCTCTGACTTGAAATACAAACAGTCTATCATTAAGGAAATAGTGAAACATGTGAGGCAGAAAAATGGATTGAAAGACTATGAAACAGTGGTAGTTAAAATGAAATCTACTCAAAGAGAGAAGGGTAACGAATCTGAAAGAAAACGTGATTCTATGCATACTTTTGATATGGGAAGTAAACCCCCAATTCCAGCTAATTCTGGTTTCTATTGTAAAGAATGTAAAGTGAGGTACAGAAACAAGCATAATTTTGATGAACATATGGAAAATCATAAATCTGGAAACATTTTGAATGTTGAAGAGACAATCATGAACATTAATGATGGAGCAACACAGAATAAACGCATACGCAAAAAAGAACCTCAAAAAGAAGTGTACTGTGAAAAATGCAACAAACACTTGTTAATTACACGGAGTGGCTATAGATATCACATGAAATACTTTCATCTTGGTGTGAAAAAGCATGCTTGCGATATTTGTGGGCGAAATTTTGCCATGAAAGGAGCAATGATGGAGCACAGACGCATCCACACGGGCGAGCGGCCCTTTGTGTGCCAGGTGTGTGGCAAGGCAGTGCGCACTTCCGGCATGCTCTACGAGCATCTTCAGTCGCACAATGATGCACGTCCCTTCAGTTGTCCAATCTGCCACAAAACGTTCAAGGTCAAAAGTCACCTTAGAGGACATAAACTCGTGCATACTGGAGAAAGAAAATATGTGTGTGAGTTATGTGGAAAGGGATTTCTACAAAGAAATGAAATGAAAAACCACATCATGACTCACAATAGTTCAAAACCTTTCCCATGCCCAATATGTGATTCGAAATTCAATCAGAAACGATATTTGAGACAGCATCTGCATGGAAAACATGACTTTGATTCAAAAGAAGCCTGCTCAGTTGCACAGGATATTGTACAGCTTGTATCTGTCTCATCAACAGAACAGCATCACATCAAGACATCAGTGAAGGAACCACACTTGCCCATTACTTGA
Protein Sequence: MHLSRMIMVVRKDTNRMQLISFVLHMNGNVKTLELSTDFPESSDFKGNQIVIKEVVKHVRQKNKLKYDDTLVVKVKSTHRNKANESEAKNAFMRKIDMEAKKLNSATVGPGYHCKDCNLRYRHKHNFDLHMKTHESDSKSNAEESGLVSNEDEQQLKMNNNLYCEKCNKHLMSRGGLRYHMKHFHLGVKNHACDICGQRFAQKRTMMEHRRIHTGERPFVCQVCGKAVRTSAILYKHLQSHSTERPYSCSSCQKTFKYSHQLAEHANVHTGQRNYICELCGKSFTTRKCFARHMMTHNGLKPYPCPLCNSTFNQKRYLRQHLNGRHSLDPRETRKIVQNTPKQTFSFVLHLNGNEKTLELSTDFPESSDLEGNLNVIKEVVKHVRKRNNLIDGETLNVKVKSTRSKNTYESEGNNDVMHKMYTEAKNLKSTTTGHGYYCRDCDLRYKHKHNFEAHMKTHISANKSTDEVSEPRSNEDGQQLKTKKTIHCEKCNKYFTSKSTIRMHMRHTHYGVKKYVCEFCGKRFVLEGLMKEHRRIHLDERPFVCQVCGHAAKTSSALRSHLRLHSDARPFSCSTCQKAFKFSHQLTAHHTVHTQEKKYVCDTCGKAFTRPNVLQRHIQSHTDLRPYQCPLCTSTFSQKRYLRQHLNGRHNLDPRETNLIVQNIEKQVTKHDQDIPVNDTVDAHNLLKNEIMVLRKDNNQMQTFSFVLHMNGNEKALELSTDFPESSDFEGNLIVIKEAVKLVRQKNRLKDDDTLVVKVKSTHRNDANKSEGEYDFIDKIDKEAENINSATTGPGYYCKDCNLRYRRKRSFDIHMKTHDPGNKSKESELLSNKDEQQLKTKNNLYCENCNKCFTSRSGLRYHMRHNHLSEIKHACEFCGQCFAQKGEMMVHRRIHTGERPYICQVCGKAVRTSNLLNSHLKLHSDERPYSCQTCNMTFKFSHALFKHNRVHTGERNYVCELCGKGFASRTCLKRHMMSHTGLKPYPCPLCSSTFNQKRYLKQHLSNRHGLDPREACTIVQNIEKQEIKPTVDDKHHQDIPVNDTVDALDLLQNVEVEINETEEALDGKFSFVLHMNGNGRTLEILNDFPESSDLKYKQSIIKEIVKHVRQKNGLKDYETVVVKMKSTQREKGNESERKRDSMHTFDMGSKPPIPANSGFYCKECKVRYRNKHNFDEHMENHKSGNILNVEETIMNINDGATQNKRIRKKEPQKEVYCEKCNKHLLITRSGYRYHMKYFHLGVKKHACDICGRNFAMKGAMMEHRRIHTGERPFVCQVCGKAVRTSGMLYEHLQSHNDARPFSCPICHKTFKVKSHLRGHKLVHTGERKYVCELCGKGFLQRNEMKNHIMTHNSSKPFPCPICDSKFNQKRYLRQHLHGKHDFDSKEACSVAQDIVQLVSVSSTEQHHIKTSVKEPHLPIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01354284;
90% Identity: iTF_01354284;
80% Identity: iTF_01354284;