Basic Information

Gene Symbol
LZTR1
Assembly
GCA_014356515.1
Location
chrX:31217960-31244721[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.5e-12 2.2e-10 40.9 0.2 2 108 362 499 361 501 0.86
2 5 1.5 2.3e+02 2.2 0.1 77 108 500 531 498 533 0.89
3 5 1.7e-10 2.5e-08 34.3 0.0 8 52 597 639 591 653 0.82
4 5 0.009 1.3 9.4 0.1 61 97 675 711 657 725 0.80
5 5 4 5.8e+02 0.9 0.1 77 100 725 748 719 758 0.77

Sequence Information

Coding Sequence
ATGGGTAATCCTGATAAAATGGACTATGATCAGAACTGCAACTGGCCTGAATGTCTCACCCTTGAGTTTGGGCCATTTGAAACCGTCCATCGATGGACTCGCATGCCAGAATGCGATGAATTCGTGGGCGCTAGACGAAGCAAGCACACTGTTGTAGCATACAAGGATGCTATATATGTGTTTGGTGGTGATAATGGCAAGAGCATGCTCAATGATCTTCTCCGATTTGACGTCGAGGAGAAATCTTGGGGCCGTGCTTTTGTCACTGGGACACCACCGGCACCTAGATATCATCACTCAGCAGTTGTTCATGACTCGTCCATGTTTGTATTTGGAGGCTACACGGGCGATATACATTCAAATTCCAATTTAACAAACAAAGATGACTTGTTTGAATATAAATTTCAAACTGGTCAGTGGATTGAATGGAAATTTGAAGGAAGAACACCTGTTCCTCGTTCCGCCCACGGCGCTGCTGTTTACGATGGAAAGCTGTGGATTTTTGCAGGCTATGATGGCAATGCTAGACTTAATGATATGTGGACCATATCTCTTCAACGCGGGAATACTAATGATCGTTGCTGGGAAGAAGTAATACAATCTGGCGATTGTCCACCAACTTGCTGCAATTTTCCGGTGGCCGTAGCACGAGAATCAATGTTCGTTTTCAGTGGCCAGAGTGGTGCTAAAATTACTAACAGCCTGTTCCAGTTCCACTTCAAAACTAGATGCTGGACCCGAATCTCAACCGATCACATTTTGAGGGGTGCTCCACCTCCACCGGCTCGTCGCTATGGGCATACAATGGTGGGCTTCGACCGTCATCTGTACGTGTTTGGGGGTGCAGCTGATTCCACGTTACCCAACAACCTGCACTGTTACGATCTTGATACGCAGACGTGGTCGGTGGTGACGGTCGCACATGATTCCAACATTCCATCGGGAAGGCTGTTCCATGCCGCCGCTGTGGTCGGGGAAGGCATGTACATATTTGGGGGCACCGTCGACAACAATGTGCGCAGTGGCGAGATGTATCGTTTCCAATTTTCTTGCTACCCCAAGTGCACCCTTCATGAAGATTTTGGGAAATTACTGGAAATGAAACAATTCTGCGATGTGGAATTCTTGGTTGGTATTAATGAAGTTAAAATACCGGCACATCTGGCTTTGGTGTGTGCCAGATCGCAGTGGCTGAGAAATCGCATACTTCAGGCCAAAGCTGCTAGAGAAATCCATTTGGAGAAGTTATTCGGACAAGTAGAGCAGCGGAACTTACCTTTGAAAGATTTTCCTCTTCTTGAAGTGAAATTGAAAGATGCTGTACCAGAAGCTTTTGAAATGGTCCTGAATTACATCTACACCGACCGCATTGATCCAACTAAAAGGAAAGATCCCCACAGCAACCGAATTGTTCTTCTGATGATGGATGTCTATAGACTAGCTGTTCAATTCCACATGAGCAGACTTGAACAACTATGTGTAAAATACTTGGAGGCCACTATTAATAATCAGAATGTTTTGGAAGCTTTGCACAATGCCTCGACGTTGAAGTTGTACTACATCAAAGAGTTTTGTTTGAAATATATCGTGAAAGAGAACAACTACAATAAGATCATAATGAGCAAGGATTTTGAGTCCCTGGAGCAAGGTTTGATGGTTGAGATTATTAGGAGGCAACGTATACCACAAATTAGATCACTCCCAGAACCCCAGTTTGACACCTTGGGTAATTACAGTTTCGGTTCAAGCTTGGAACAAGATATGGAAACGTTTTTGAAGTACTCTGGAAAGGATTTCTGCGACATCATTTTGATGCTGGAAGGTACCGCTATTCCATCGCACAAGTCAATTCTTGCTGCTCGTTGCAGCTACTTTGAGGCTTTATTCCGATCTTTCATGCCTGCAGATAACGTAGTCAATGATAAACACCTTGATATTACTTATGACAGATCAACCGCGCATGGTATTCCTTCTAAGAACATTCCTACAATTGTGATTCAAATCGGAGAGAGTATTCCATCAAGACAAGCATTTGATTCGCTTTTGAGATACATCTACTATGCTGACGTGAATATGCCACCAGAAGATTCTCTCTATTTGTTTAGTGCTCCATACTTCTATGGATTCACAAACAGTAGGCTACAGGCATTCTGCAAACAAAACTTGGAAATGAACGTAACGGTTGAAAATGTTTTGCAAATTTTGGAAGCAGCTGATCGTATGCAAGCATTGGATATGAAAAAATATGCATTGAGACTCATTGTTCATCATCTACCAAAGATCGTTCAATTACCAAAGTTCAAACTTCTTGGCAGAGATCTTCTATTGGATATTGTTACGGCTACAGCTGAAGAAATGAGTGATGCCAAACTATGTCAAGATATGTCAAGCATCAGCCTCAGTAGCGACTCTTATTAG
Protein Sequence
MGNPDKMDYDQNCNWPECLTLEFGPFETVHRWTRMPECDEFVGARRSKHTVVAYKDAIYVFGGDNGKSMLNDLLRFDVEEKSWGRAFVTGTPPAPRYHHSAVVHDSSMFVFGGYTGDIHSNSNLTNKDDLFEYKFQTGQWIEWKFEGRTPVPRSAHGAAVYDGKLWIFAGYDGNARLNDMWTISLQRGNTNDRCWEEVIQSGDCPPTCCNFPVAVARESMFVFSGQSGAKITNSLFQFHFKTRCWTRISTDHILRGAPPPPARRYGHTMVGFDRHLYVFGGAADSTLPNNLHCYDLDTQTWSVVTVAHDSNIPSGRLFHAAAVVGEGMYIFGGTVDNNVRSGEMYRFQFSCYPKCTLHEDFGKLLEMKQFCDVEFLVGINEVKIPAHLALVCARSQWLRNRILQAKAAREIHLEKLFGQVEQRNLPLKDFPLLEVKLKDAVPEAFEMVLNYIYTDRIDPTKRKDPHSNRIVLLMMDVYRLAVQFHMSRLEQLCVKYLEATINNQNVLEALHNASTLKLYYIKEFCLKYIVKENNYNKIIMSKDFESLEQGLMVEIIRRQRIPQIRSLPEPQFDTLGNYSFGSSLEQDMETFLKYSGKDFCDIILMLEGTAIPSHKSILAARCSYFEALFRSFMPADNVVNDKHLDITYDRSTAHGIPSKNIPTIVIQIGESIPSRQAFDSLLRYIYYADVNMPPEDSLYLFSAPYFYGFTNSRLQAFCKQNLEMNVTVENVLQILEAADRMQALDMKKYALRLIVHHLPKIVQLPKFKLLGRDLLLDIVTATAEEMSDAKLCQDMSSISLSSDSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857760;
90% Identity
iTF_00857760;
80% Identity
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