Lstr013333.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Laodelphax striatellus
Gene Symbol
LZTR1
Assembly
GCA_014465815.1
Location
CM025335.1:15525779-15565683[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 9.2e-09 3.8e-06 28.3 0.1 31 108 410 502 410 504 0.85
2 4 1 4.4e+02 2.4 0.1 77 108 503 534 501 536 0.89
3 4 4.8e-16 2e-13 51.8 0.0 9 97 596 684 588 698 0.81
4 4 3.2 1.4e+03 0.8 0.1 77 100 698 721 694 731 0.77

Sequence Information

Coding Sequence
ATGGATAACCCTGCCAAAATGGACTACGATCAGAACTGCAACTGGCCAGATGCGGCTGATTGTCTTACCCTTGAGTTTGGACCATTTGAAACCGTTCATAGATGGACTCGCATGCCAGAATGCGATGAGTTTGTGGGCGCTAGACGAAGCAAACACACGGTTGTAGCATACAAGGATGCTATATATGTGTTTGGAGGTGACAATGGCAAGAGCATGCTCAATGATCTTCTACGATTTGATGTTGAGGAGAAATCATGGGGTCGTGCTTTTGTTACTGGGACACCGCCGGCACCTAGATATCATCATTCAGCTGTTGTTCATGACTCGTCTATGTTTGTTTTTGGAGGCTACACGGGCGATATACATTCAAATTCCAATTTAACAAACAAAGATGACCTGTTTGAATATAAATTTCAAACTGGTCAATGGATTGAATGGAAATTTGAAGGAAGAACACCCGTTCCTCGTTCTGCCCATGGCGCTGCGGTCTATGATGGGAAACTGTGGATTTTTGCAGGGTATGATGGTAATGCTAGACTCAATGATATGTGGACCATATCTCTTCAACGCGGAAATACTAATGACCGTTGCTGGGAAGAAGTTGTGCAGTCAGGAGATTGTCCCCCAACTTGCTGCAATTTTCCGGTGGCCGTTGCACGTGAATCGATGTTTGTTTTCAGTGGTCAGAGTGGCGCAAAAATTACTAACAGCCTCTTCCAGTTTCACTTCAAAACTAGATGCTGGACCCGAATTTCGACCGAGCATATTTTGAGGGGTGCACCTCCGCCACCGGCTCGCAGATACGGTCATACGATGGTTGGGTTCGACAGACATCTGTACGTATTCGGGGGTGCAGCCGACTCCACCCTACCCAATAACTTGCACTGCTATGACCTTGACACGCAGACTTGGTCCGTTGTGACAGTAGCGCATGATTCCAACATTCCCTCGGGGAGACTCTTCCATGCCGCGGCTGTAGTTGGGGAAGGCATGTACATATTTGGGGGCACTGTCGATAATAATGTGCGCAGTGGTGAAATGTACCGGTTTCAATTTTCTTGCTACCCCAAGTGCACTCTCCATGAAGATTTTGGGAAATTACTGGAAATGAAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTATGGTTTGCGCAAGATCACAGTGGCTGAGAAACCGTATACTTCAGGCCAAAGCTGCAAGAGAAACCCATCTAGAAAAGTTATTTGGACAAACAGAGCAGCAGGACTTGCCATTGAAAGATTTTCCTCTTCTGGAAGTGAAATTAAGAGATGCTGTACCAGAAGCTTTTGAAATGGTTCTAAATTACATCTACACAGACCGCATTGATCCAACCAAAAGGAAAGATCCTCACAGTAACCGGATTGTTCTTTTGATGATGGATGTCTATAGACTAGCTGTTCAATTCCACATGAGCAGACTTGAACAACTGTGTGTGAAATACTTGGAGGCAACTATCAACCATCAAAATGTTCTGGAAGCTTTACACAATGCTTCCACGTTGAAGTTGTACTACATCAAAGAGTTTTGTTTGAAGTATATCGTGAAAGAAAATAACTACAATAAGATAATTATGAGCAAGGATTTTGAGACGCTGGAGCGTGGTCTGATGGTTGAGGTTATCAGACGGCAGCGTATACCACAAATAAGATCTCTCCCAGAACCTCAGTTTGATACTTTGGGTTCAAGTTTGGAGCAAGATATGGAAACGTTTTTGAAATATTCTGGAATGGAATTCTGTGACATAATTTTAATGTTGGATGGCACACCGGTTCCGTCACACAAGTCAATACTAGCTGCTCGTTGTAGCTACTTTGAGGCTTTATTCCGATCCTTCATGCCTTCAGATAACATCGTCAATATTCAAATCGGAGAGAGTATACCATCGAGACAAGCATTCGATTCGCTTTTGAGGTACATTTATTATGCTGACGTGAATATGCCACCAGAAGATTCTCTCTATTTGTTTAGTGCTCCATATTTCTATGGATTCACAAACAATAGACTACAGGCATTCTGTAAGCAAAACTTGGAAATGAACGTTACGGTTGAAAATGTTTTGCAAATTTTGGAAGCAGCTGATCGTATGCAAGCGTTGGATATGAAAAAATATGCATTAAGACTAATTGTTCACCATCTACCGAAGATCGTTCAATTACCAAAGTTCAAACATCTTGGCAGAGATCTTCTGTTGGATATTGTTACGGCTACAGCTGAGGAAATGAGTGATGCAAAATTATGTCAAGATATGTCGAGCATCAGTCTTAGTAGCGATTCTTATTAG
Protein Sequence
MDNPAKMDYDQNCNWPDAADCLTLEFGPFETVHRWTRMPECDEFVGARRSKHTVVAYKDAIYVFGGDNGKSMLNDLLRFDVEEKSWGRAFVTGTPPAPRYHHSAVVHDSSMFVFGGYTGDIHSNSNLTNKDDLFEYKFQTGQWIEWKFEGRTPVPRSAHGAAVYDGKLWIFAGYDGNARLNDMWTISLQRGNTNDRCWEEVVQSGDCPPTCCNFPVAVARESMFVFSGQSGAKITNSLFQFHFKTRCWTRISTEHILRGAPPPPARRYGHTMVGFDRHLYVFGGAADSTLPNNLHCYDLDTQTWSVVTVAHDSNIPSGRLFHAAAVVGEGMYIFGGTVDNNVRSGEMYRFQFSCYPKCTLHEDFGKLLEMKQXXXXXXXXXXXXXXXXXXXAMVCARSQWLRNRILQAKAARETHLEKLFGQTEQQDLPLKDFPLLEVKLRDAVPEAFEMVLNYIYTDRIDPTKRKDPHSNRIVLLMMDVYRLAVQFHMSRLEQLCVKYLEATINHQNVLEALHNASTLKLYYIKEFCLKYIVKENNYNKIIMSKDFETLERGLMVEVIRRQRIPQIRSLPEPQFDTLGSSLEQDMETFLKYSGMEFCDIILMLDGTPVPSHKSILAARCSYFEALFRSFMPSDNIVNIQIGESIPSRQAFDSLLRYIYYADVNMPPEDSLYLFSAPYFYGFTNNRLQAFCKQNLEMNVTVENVLQILEAADRMQALDMKKYALRLIVHHLPKIVQLPKFKHLGRDLLLDIVTATAEEMSDAKLCQDMSSISLSSDSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01353829; iTF_00283682; iTF_01060041;
90% Identity
iTF_01353829;
80% Identity
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