Ster006583.1
Basic Information
- Insect
- Sisyra terminalis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_958496175.1
- Location
- OY292275.1:48000856-48009250[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.23 4.7e+03 -3.3 1.2 220 251 133 167 96 192 0.53 2 3 1.5e-111 3.1e-107 358.5 28.1 1 299 211 524 211 525 0.90 3 3 0.0059 1.2e+02 2.0 3.8 193 238 555 599 530 600 0.72
Sequence Information
- Coding Sequence
- ATGCTTAGTATTGAACATTTTACAAATCCAACGAAACGTCATCACCACCACATTATTGGCGGCAGCGATAGTTCTGGCGGTGATAGTACCGTCATCGTTGGTTCAAAACCCACCAACAATTGTGCCGATAACGGCAAAAACGCTGTTCATATTTCTGGTAGTTGTTcgaaatgttttgaaaattcttGCCGAAATAGTGGGGCAGTATATCACATGATGGACGAGGTCGATGGGAATCATACAATGGAATTACTACGAATTGTTGAAGATGGTGACGAAATGAAAATTTCCGAGCAAATTGATAGAGAAAATTTGTCTGAATTAAATGACGATGATGATGAAGAAGGTAGTGCCTATTCGGACGCTGATTTAGATATCGAGTGTAGTGATAGTGAAACTTTGGACGAACCTTTGGATAAAATTGAAAGTAATAACAATGAATGTTCCACGAGCGACGCAAATGATAAACAGTTAAAATTAGAATTAACAAATTCCAAGGAAAATTTTGACGACTTTAATGTGAATAACTATGATAAAAGTGAAAGTGAAGATGAAAATTGGAATAGTAAAGAAACGCCGGTTACAACTCCAGACTGTATTAACGATTTTTTGGATAAGTGTAGTGATAATgCGGAGGCTCGGCTGGCGGCGCGAAGACAAGCCCGAGCTGAGGCGCGGGAAATTCGAATGCGTGAACTGGAACGGCAACAACGTGAACAAGAGGAAAATGCTGACAGAGTTTATGATATGTATGCCGATCCGGTGACAAGAAGTGCGGCCACCACCCGATTAGCGGCAAGCTCAAGATCGACAATGATTTCGAACAGTAGTTATCATTCAAGTAGACGAAGCTCGGAAGACTCGTTGGAGGATGGCGGCAGTTTACGCGACATTCGCATGGAGTTGCGTGAGCTGGAGGACAAATTTCGCAAGGCAATGATTGCCAACGCTCAATTAGATAACGATAAGGCTTCGTATACTTATCAAATAGAATTGTTGAAAGATCGTCTGGAAGACCTGGAACAAGACCACTCGCAGCTACAGCGGGAACATCGCGACAAATGTCGCGAATTCGAACAACTAAAACGTGTCGCCGCCAAACTCAAAGATGATCTTACCTTCGCCAAAGCTCAACTGGATGAGCGTGATACGttaatcgctgaaaaaggactaGTTATTATTTGTTACGAAGACGAGGTAGGAGGAGGAGGTGATATAAATGGTAGTCGAATTAAAAGCCCGAAGAAGGCTTTAGTTAGTTTGGAAAATGCTGCGCTTTTAGAATCCGCTGGTGAAGGTAGTTTAGATGTAAGACTTAAAAAATTTTCGGAAGAGAAAAAAGATTTAGAGGATAAGTTGCGATCGTTGCGAATCGAATTGGATGAGGAACGAAACAAGACGCGAAGACGAAGGTCGAGTAACAATTCAACGTTAATTGGAAACTCAATCACGCACAATGGACCAGAGGGTGAACTTTTAGATAATATGGACATTTTAGATATTCAACgTGAAGCCAATAAGCAATTAGcggattataaatttaaattacaaaaagcGGAACAAGACATTGCCTCGTTGCAAGGAGCCGTGGCGCGATTGGAAAGTCAAGTGGTTCGATATCGAGCGGCTGCTGAGGCTTCTGAAAGGGCCGAAGACGAATTAAAAGTCGAGAAGCGAAAACTACAAAGAGAGGCTCGGGAATCGCAGAGTCGAGTCGAGGAACTTGAGACTGCGAACAGCCATTTACAAAAGCGTTTGGATAAACTGAAAAATGCCAAGTCGACGTTATTAAAGGAACTTTGA
- Protein Sequence
- MLSIEHFTNPTKRHHHHIIGGSDSSGGDSTVIVGSKPTNNCADNGKNAVHISGSCSKCFENSCRNSGAVYHMMDEVDGNHTMELLRIVEDGDEMKISEQIDRENLSELNDDDDEEGSAYSDADLDIECSDSETLDEPLDKIESNNNECSTSDANDKQLKLELTNSKENFDDFNVNNYDKSESEDENWNSKETPVTTPDCINDFLDKCSDNAEARLAARRQARAEAREIRMRELERQQREQEENADRVYDMYADPVTRSAATTRLAASSRSTMISNSSYHSSRRSSEDSLEDGGSLRDIRMELRELEDKFRKAMIANAQLDNDKASYTYQIELLKDRLEDLEQDHSQLQREHRDKCREFEQLKRVAAKLKDDLTFAKAQLDERDTLIAEKGLVIICYEDEVGGGGDINGSRIKSPKKALVSLENAALLESAGEGSLDVRLKKFSEEKKDLEDKLRSLRIELDEERNKTRRRRSSNNSTLIGNSITHNGPEGELLDNMDILDIQREANKQLADYKFKLQKAEQDIASLQGAVARLESQVVRYRAAAEASERAEDELKVEKRKLQREARESQSRVEELETANSHLQKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01348860;
- 90% Identity
- -
- 80% Identity
- -