Basic Information

Gene Symbol
Camta1
Assembly
GCA_958496175.1
Location
OY292275.1:45866654-45885273[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-35 3.9e-31 107.4 1.5 40 116 2 76 1 76 0.97
2 2 0.039 7.9e+02 -0.0 0.9 4 74 1289 1361 1286 1369 0.75

Sequence Information

Coding Sequence
ATGTTGCTGTACAGTAGGAAGAAGGTTCGTTATCGTCGCGACGGATACTGTTGGAAGAAGAGAAAAGACGGCAAGACAACTCGGGAAGATCACATGAAGTTGAAAGTACAAGGAACAGAAtgCATTTATGGTTGTTATGTACATTCAGCGATTTTGCCAACGTTCCATCGCCGCTGCTACTGGCTTCTACAGAATCCAGACATTGTACTTGTGCATTACTTGAATGTTCCATATCCAGATGATAACAAACTCGCTGTGATCACGCCAAGTTTAGCACTATGGGGCGACAAAAAAGAATGGACAAAAGATGAATTGGTTTCCCAACTCAAACCAATGTTTTTTAGCGAAGATGAGCCCGACTTGAACAATGAGCTGGAAATTTCGACGGCCGAAACAGTAGAAGCGATTGTTAGTCAACTGATGGAAAAGCAACGTGTTGCACGCCAAGCTGCTTTGGTGAAGCAACTTGAGTGCGGATGTCCCGATTCCACTTGTGCAGACGGAAAAACTTGTTCCCATCCTATGCGACGGATTACTGCCGCCAAAAACGAAGTTGTAGGCTGCAGTGTTCCTTCGCCGTTACCTAGTGCTTCTGTTTCTAATTCGAACACTAGACTCAACGATGGAAGCAATCAAGTTTCGTCAACCACTGGATCTGGAAGCATGTTACTTACCACAAACAGTCATCCATCGCGAGTTTACTCGCGAGAATCCCGCTCTTTGCATAATTCCCATACCCAACAACACGTCACCCAAAATGGCCACGGAATGAACACCTCGAGTCAAACAGCAACCACTTCAACAGCGCCTCCGTTAGTTCTAAGTTTGTCACAAATTCAAGGGGGTGGAGGTCTCTTGATTCTCAACAGCTCTCCAAGCACTCAAGGTCACTCTTCTGTACAGCAGTCGATAATGTCACCGGTTTCGGTAGCCTCGTTTGTTTGCAGTACAAATACATCACAAATTAGAAATAATCACCATTCCAAGCAAAACGTTCTGAAGAACAACACTTTAGTCTTAAAGCAAGAAGTGATGGACACAAATCCTTCGTCTTGCTGCATGCAATCTTCCGGTACAAACACTCAAGTTACTACAAGCATTAGTTCGCTAAACGTTAATCGTTTAGGCAAGAAAATGGATATTAGCAATGGAAACGTTTCAACAGTATTATTTGATGGAACTGCATACGCGCGACGCGAAAAGATTACCATTAATCACAATGGAAGTGTTCCAGTAGCTAGTGCTCCATCAACTCCATCAAAGCATATGGATACGAGTgaagaaataattgatttcaaacACAACTTTTGTGGCGATACTGTGGTTTTGCTAGGAACTAGTTCCAATGGATCCTTAATTCACAAATCTGACGGGTCCGTTATTAATGGAACGTTTTGCAACGAGACATTGGACCTATCTCAAGAGGACATCCAACGCACCTTGTCAGCCAATATGCCACTCTGCTCTGAAATCGAACGACAAAACGCGGAACATTCTGTCGTTTTGAATAATAGCAATCCGGTCATCGCTAGTAAAAAAGTTCGGAGTAATGATCAAATGTCTCCTCAGGATGTTCCCGTTTCTGAAATCAATCCGATGGATTTCATTAACTGCTCGGATGTGGTATCTCCGACTCATGTTGTAGATGATGACGTTTTTGTGAATTTGGATGCGTTTGATATGCTTGGAGAGTTTCCTGAACTGGAAGTTTTAGATCCTCATGGAGGAGTGGTTGGATCTGTTACTAGTCCACATGAAGAGGCTTCGCCTCGAGTTGAATTCCGTGAAGGGACAGTAAACATCACCGATTATTCGCCCGAATGGGCTTATCCGGAGGGAGGTGTTAAAGTTTTGGTAACCGGACCTTGGTATTCAACCACTACCCCATATACGGTTTTATTCGACACTTTCCCCGTGCCGACAACCCTAGTACAAAGCGGTGTTTTAAGATGTTACTGTCCAGcaCATGAAGCCGGTTTGGCTACTTTACAAGTAGCGTGTGAGGGCTTCGTTATTTCCAATTCTGTGATATTTGAGTACAAGTTACCACCAAAAGAAGAGCAGACTAGCACGCAAGAAGCAAATACAGAGCGTCCCAACGATAATCTGCTCAAGTTCACTTTATTGCAACGGCTCGAAGCGATGGATGATCGACTTCAAATCAAACAAGAACCGGAAGGCTCTGATTCAgttGAAGACACTGCCCTGTTAACACAAAACAATTTCGAAGATAGATTAGTGACCTACTGCCAAACTCTAACAAGTAGGGAATGGCGGCAAGGCGAAGAACTTAGCACATCTTGGTTTTCAAGCCACAAAGGAATGACACTTCTTCATTTAGCTGCATCGCTCGGGTATTCACGTCTGGTTTGTGCCATGCTTCATTGGCGTGCAGAAAATTCGTCGTTATTACTTGAAACAGAAGTTGATGCTCTAAGTCAGGATGAAGATGGATTTACACCTTTGATGTGGGCTTGTGCTAAAGGGCACACCGAAACGGCAATAATGCTCTACAGATGGAATCATACCGCTCTTAATATTCGTAATTGTTCAGCTCAAACAGCTTTGGAATGCGCTGTTGCCAACAAACAATTTGAATTGGCTCAGGAAATGGAACAGTTGGAAGCTCGTCGAGAAAGAGCCAACTTGGCGTTGCTTCcatcaaatattatttcaataactgaaaatattccGTTGTCTCCGCTGGCGATTTCACCAGCAAGTTCCATCACTTCGTTAACATCGATTGCATCGACTAGCAAATCTCACGATGGTGTATTTCTTCGACCTGGTGCCATCGCCAACAATTTGAATTCGATGCGGTCAAACAACAATTCTGGGAATGATACAACATCGTTGCTTCATCGTGGATCGTTGCATTCGCAACGACTTATCAAGCGTCCGTCTATTGATAGTGGAATCCATATGACTGCTGGACAGTCTTCTGATAGCCTTATTTCCTATCGTTCGAAAAGTAGCAAAACACCGGTTAACCGCGATATTCCTAAACTTTCCAGatttgATCGCAGTATGTCCCTTCCTTTGAACTCTCCATTATCGAACGGAGACACCAACTACGACTCCCCCGATATCATCCGGACATCCCCAATTCGCAAAATGGATTTCGCATTGTGCGAGGTGGCTGGGGGGCCACGAAGCGTTAGCCCCCTTATTGATGTCGAAGCTGTTTCGGACGATGATAGAGAGGAGAACAGACAAAATGTAGTAGGGGAACAAGACGTTAGAGTATTCACTTTGGCTGAGCAAATTATTGCTGCAATTCCCGATCGAATAAAGaatGAAAGTGAGGAAATGATGTTAGAAAACAGTCCAAGGAGCCATGATTCATTATTACCATCGAGCACTTTGACTGATGTGTTTATGGAGCCGTTACTCGATCATTCCACAGCCGCTAGTTTTGAACCGGTTGAGTTCAATTTTGAGTTTTCCGACCATAATTATCGGTACTATGATGTCGCAACACCTTGTTCTAGTTTAAGTCCAGCTTCGTCTAGTTGTCTCCAATCACCGAATTCCTTCACGCTGGACTCTCCATCGCCTCCACCAACCACCGCAGacttttgtgaattttttcaaGCGTCCGGAAGTGTATTTGAAAAAGATTTCTCCAATCTCACCCTCTCTGATCGCGAACAAAGGGAGTTATATGAAGCGGCAAAGATAATACAAAAAGCTTACCGATCGTACAAAGGACGTAAAAAGCTCGAGGAACAAGACAAAGAGCGAGCTGCCGCGGTTTTGATTCAGAATTATTATCGGAGATATAAACAGtacGCGTATTTCAAACAAATGACCAAGGCGGCAATGGTAATTCAAAATGGATATCGGTCGTATTGTGAACATAAGCGCTTTAAGAAGAATCAAGAAACGGCTGTTTGCATCCAGAACTACTACCGCGATTATAGTGAACAAGGGAATACTGGAAGTCGGGAAGGAACTCCTTCGTCTGGATTGAAgaGAACTTATTCTCAGAGACGGCAACATCAAGCAGCTCGTAAAATTCAACAGTTTATGAGACAATCCAAAAGCaaATTACAGAAAGAACGAGCCGAAAAAGAGAAGCAGGTGGGCCGGTCAGTGGATGTCCGTCCAAAGTCGCCATCTCAAGAAGTCAATTTAACGTCCACCGTCCCAAATAACAGTTCCAGATCAAATAACCAAAACATGGACGATTTACAATCCAAGCGAAGCAATGATCAAAACGGGCAACCCTAA
Protein Sequence
MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWGDKKEWTKDELVSQLKPMFFSEDEPDLNNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKTCSHPMRRITAAKNEVVGCSVPSPLPSASVSNSNTRLNDGSNQVSSTTGSGSMLLTTNSHPSRVYSRESRSLHNSHTQQHVTQNGHGMNTSSQTATTSTAPPLVLSLSQIQGGGGLLILNSSPSTQGHSSVQQSIMSPVSVASFVCSTNTSQIRNNHHSKQNVLKNNTLVLKQEVMDTNPSSCCMQSSGTNTQVTTSISSLNVNRLGKKMDISNGNVSTVLFDGTAYARREKITINHNGSVPVASAPSTPSKHMDTSEEIIDFKHNFCGDTVVLLGTSSNGSLIHKSDGSVINGTFCNETLDLSQEDIQRTLSANMPLCSEIERQNAEHSVVLNNSNPVIASKKVRSNDQMSPQDVPVSEINPMDFINCSDVVSPTHVVDDDVFVNLDAFDMLGEFPELEVLDPHGGVVGSVTSPHEEASPRVEFREGTVNITDYSPEWAYPEGGVKVLVTGPWYSTTTPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACEGFVISNSVIFEYKLPPKEEQTSTQEANTERPNDNLLKFTLLQRLEAMDDRLQIKQEPEGSDSVEDTALLTQNNFEDRLVTYCQTLTSREWRQGEELSTSWFSSHKGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDEDGFTPLMWACAKGHTETAIMLYRWNHTALNIRNCSAQTALECAVANKQFELAQEMEQLEARRERANLALLPSNIISITENIPLSPLAISPASSITSLTSIASTSKSHDGVFLRPGAIANNLNSMRSNNNSGNDTTSLLHRGSLHSQRLIKRPSIDSGIHMTAGQSSDSLISYRSKSSKTPVNRDIPKLSRFDRSMSLPLNSPLSNGDTNYDSPDIIRTSPIRKMDFALCEVAGGPRSVSPLIDVEAVSDDDREENRQNVVGEQDVRVFTLAEQIIAAIPDRIKNESEEMMLENSPRSHDSLLPSSTLTDVFMEPLLDHSTAASFEPVEFNFEFSDHNYRYYDVATPCSSLSPASSSCLQSPNSFTLDSPSPPPTTADFCEFFQASGSVFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRKKLEEQDKERAAAVLIQNYYRRYKQYAYFKQMTKAAMVIQNGYRSYCEHKRFKKNQETAVCIQNYYRDYSEQGNTGSREGTPSSGLKRTYSQRRQHQAARKIQQFMRQSKSKLQKERAEKEKQVGRSVDVRPKSPSQEVNLTSTVPNNSSRSNNQNMDDLQSKRSNDQNGQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00004658;
90% Identity
iTF_01348852;
80% Identity
-