Snig007016.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- Camta1
- Assembly
- GCA_958496155.1
- Location
- OY292314.1:55581209-55611006[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-35 4e-31 107.4 1.5 40 116 2 76 1 76 0.97 2 2 0.051 1.1e+03 -0.4 0.7 4 72 1301 1371 1298 1380 0.74
Sequence Information
- Coding Sequence
- ATGTTGCTGTACAGTCGGAAAAAGGTGCGCTATCGTCGCGACGGCTACTGTTGGAAGAAGAGGAAAGACGGGAAAACGACACGGGAAGATCACATGAAGCTAAAAGTACAAGGAACAGAAtGCATTTATGGTTGTTATGTGCATTCAGCGATTTTGCCGACGTTCCACCGCCGCTGTTACTGGCTTCTACAGaacccAGACATCGTACTGGTGCACTACTTGAATGTACCATATCCTGATGACAACAAACTTGCTGTGATTACCCCGAGCTTAGCTCTATGGGGCGACAAGAAAGAATGGACAAAGGACGAGTTGGTGTCCCAACTAAAACCTATGTTTTTCAGCGAGGATGAACCCGATTTAAACAACGAATTAGAAATTTCGaCGGCCGAAACGGTGGAGGCAATCGTGAGTCAGTTGATGGAAAAACAACGGGTAGCACGACAAGCAGCTCTAGTAAAACAACTCGAGTGTGGATGTCCCGATTCGACGTGTGCCGATGGAAAAACTTGCTCTCATCCAATGCGACGAATCACGGCAGCTAAAAACGAAGGTGTTGGATGTAATGTACCATCACCACTACCAAGTGCTTCAGTGTCGAACTCCAACACTCGTCAGCTGAACGATGGAAGTAACCAAGTATCTTCGACGACAGGATCGGGTAGTATGTTACTCACAACCAATAGCCATCCATCTCGAGTCTATTCACGTGAATCGGTACGTTCCTTACACAACTCCCACGTCCAACATCAGGTCACCCAAAATGGTCACGGGATGTCCAACTCGAATCAAACAGCAACCACTTCATCGGCACCACCATTAGTCCTGAGCTTGTCGCAGATCCAGGGTGGTGGCGGTTTGTTGATCTTGAACAGCTCACCCAGCACCCAAGGCCATTCTTCCGTACAACAGTCAATAATGTCTCCGGTTTCCGTAGCCTCGTTCGTTTGCAGTACAAATACATCACAAATTAGAAATAATCACCATTccaaacaaaacattttaaagaaCAACACGTTAGTGTTAAAACAAGAAGCGATGGACACCAATCCGTCATCGTGTTGCATGCAATCTTCCGGTACCAACACTCATGTCACCACCAGCATTAGCTCGTTAAACGTGAATCGGTTGGGTAAAAAAATGGATGTTACCAATGGAAATATTTCGACAGTATTATTCGATGGGACAACTTATTCACGTCGGGATAAAATCACTATTAATCATAACGGAAGTCTGCCAGTAGTAAGTGCTCCATCGACTCCTTCCAAACATATGGATACCAGCGAGGAAATTGTTGATTTCAAACACAATTTTTGTGGGGACACCGTCGTTTTATTAGGAACTAGTTCTAACGGATCGCTCATCCATAAATCAGATGGTTCCGTTATTAACGGAACCTTTTGTAATGAGACCTTAGATTTGTCTCAGGAGGACATTCAAAGGACTCTATCGGCTAATATGCCGCTTTGTTCTGAGATTGAACGGCAAAACGCAGAACATTCAATCGTTTTGAACAACAGTAATCCAGTGATTGCCAGTAAGAAGGTTCGAAGTAACGATGAAATGTCCCCCCAAGACGTTGCAGTGACTGAGATCAATCCAATGGATTTTATTAATTGTTCAGATGTGGTGTCCCCGACGCATGTGGTCGATGATGatgtttttgttaatttagaTGCGTTCGACATGTTGGGAGAGTTTCCAGAATTGGAAGTTTTAGATCCTCATGGTGGAGTGGTGGGCTCGGTTACTAGTCCTCATGATGAGGCGTCGCCTCGAGTCGAGTTCCGCGAGGGAGCTGTCAATATTACCGATTACTCACCGGAATGGGCGTATCCGGAAGGAGGTGTTAAGGTCTTAGTGACAGGACCTTGGTATTCAACCACGACTCCGTATACGGTTTTATTCGACACTTTCCCCGTGCCGACGACCTTAGTACAAAGCGGTGTTCTAAGATGTTACTGTCCAGCACATGAAGCCGGTTTGGCTACGTTGCAAGTAGCGTGCGAGGGCTTCGTTATTTCTAATTCTGTGATATTTGAGTACAAGTTACCACCAAAAGAAGAGCAGAGTAGCACACAAGAGGCAAACACAGAGCGTCCCAACGACAATCTGCTCAAGTTCACTTTATTACAACGGCTCGAAGCGATGGACGATCGACTTCAAATCAAACAAGAACCCGAAGGCTCTGATTCAgtTGAAGACACTGCCCTGTTAAGTCAAAACAACTTCGAAGATCGACTTGTGACCTATTGTCAAACACTGACCAGCAGGGAATGGAGGCAAGGCGAAGAACTTTCCACGTCATGGTTTTCAAGTCACCGAGGAATGACTTTGCTTCACCTCGCCGCATCTTTGGGATATGCACGTTTGGTTTGTGCAATGCTTCACTGGCGAGCCGAGAATTCGTCGTTGTTACTCGAAACGGAAGTGGATGCTTTGAGTCAAGATGAAGACGGATTTACACCCTTGATGTGGGCCTGTGCTAAGGGCCATGTAGAAACGGCCGTTATGCTCTATCGATGGAATCATACGGCTCTTAACATTAGAAATTGCTCGGCTCAGACTGCCTTGGAGTGCGCTGTCGCTAACAAACAGTTTGATTTGGCTCAAGAAGTGGAACAGTTGGAGACACGACGGGAACGTGCCAACATGGCGTTGCTACCTTCGCATCATATTTCCATAACGGAAAATATTCCATTATCACCATTGGCGATTTCGCCGGCCAGTTCGATCACGTCGTTGGCATCAATTGCGTCGATTGCGTCGACCAGCAAATCGCACGATGGCGTATTTCTTCGACCTGGTGCCATCGCTAGCAATTTGAACTCGATGCGATCTAATAGCAACATGGGTAATAGTAACGGCAATGGGGGTGATTCGACGTCGTCACTGTTGCATCGTGGCTCGTTGCATTCGCAACGGCTCATCAAGCGTCCGTCTGTCGATAGTGGAATCCATTTGACTGCTGGCCAGTCGTCCGATAGCCTTATTTCGTGTCGTTCGAAAAGTAGCAGGCAACCGGTGAATCGCGATATTCCCAAATTATCCAGATTTGATCGCAGTATGTCCCTGCCGTTGAACTCACCACTATCAAACGGCGACACCAACTACGACCCATCCGACATCATTCGAACATCGCCAATTCGCAAAATGGACTTTGCACTATGCGAGGTGGCTGGGGGGCCACGAAGCGTAAGCCCCCTAATTGATGTCGAAGCTGTTTCGGACGATGATAGAGAGGAGAACAGACAAAATGTAGTAGGGGAACAGGACGTTCGTGTTTTCACTCTAGCAGAACAAATCATTGCTGCCATTCCAGATCGAATTAAGaatGAAAGTGAGGAAATGATGTTAGAAAATAGTCCCCGAAGTCATGACTCGTTACTTCCATCGAGCACTCTGACTGATGTGTTTATGGAGCCATTACTCGATCATTCCACAGCAGCAAGTTTTGAACCGGTTGAGTTcaactttgaattttccgaccaTAACTATCGGTATTATGATGTAGCGACGCCATGTTCTAGTTTAAGTCCAGCCTCGTCTAGTTGTCTCCAATCTCCCAACTCATTCACCTTAGATTCCCCGTCGCCTCCACCAACCACTGCAGACTTTTGTGAATTTTTCCAAGCTTCCGGCAGCGTGTTCGAAAAGGATTTCTCcaatttaactctttctgATCGTGAACAAAGGGAGCTTTATGAGGCGGCAAAGATCATCCAAAAAGCTTACAGGTCGTACAAGGGACGAAAAAAGTTGGAAGAACAAGACAAAGAACGAGCAGCTGCTGTTCTAATCCAAAACTACTATCGAAGATATAAACAATATGCATATTTTAAGCAAATGACTAAAGCTGCGATGGTGATTCAGAATGGATATCGTTCGTATTGTGAGCATAAGAGGTTCAAGAAGAATCAGGAGACGGCTGTTTGTATCCAAAACTATTATCGGGATTATAGTGAACAGGGGAGCACGGGAAGTCGTGAAGGAACACCATCTTCGGgattgaaGAGGACATATTCACAGAGACGGCAACATCAAGCGGCTCGTAAAATTCAACAGTTTATGAGACAATCGAAAAGCAAATTACAGAAAGAACGAGCCGAAAAAGAGAGGCAGGTGGGCCGGTCAGTGGATGTCCGTCCAAAGTCGCCATCTCAAGAAGTCAATTTAACGTCCACCGTCCAAAATAACAAtTCCAGATCAAATAGCCAAAACGTGGACGATTTACAATCCAAGCGAATCAATGACCGTACCGAACAACCCTAA
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWGDKKEWTKDELVSQLKPMFFSEDEPDLNNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKTCSHPMRRITAAKNEGVGCNVPSPLPSASVSNSNTRQLNDGSNQVSSTTGSGSMLLTTNSHPSRVYSRESVRSLHNSHVQHQVTQNGHGMSNSNQTATTSSAPPLVLSLSQIQGGGGLLILNSSPSTQGHSSVQQSIMSPVSVASFVCSTNTSQIRNNHHSKQNILKNNTLVLKQEAMDTNPSSCCMQSSGTNTHVTTSISSLNVNRLGKKMDVTNGNISTVLFDGTTYSRRDKITINHNGSLPVVSAPSTPSKHMDTSEEIVDFKHNFCGDTVVLLGTSSNGSLIHKSDGSVINGTFCNETLDLSQEDIQRTLSANMPLCSEIERQNAEHSIVLNNSNPVIASKKVRSNDEMSPQDVAVTEINPMDFINCSDVVSPTHVVDDDVFVNLDAFDMLGEFPELEVLDPHGGVVGSVTSPHDEASPRVEFREGAVNITDYSPEWAYPEGGVKVLVTGPWYSTTTPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACEGFVISNSVIFEYKLPPKEEQSSTQEANTERPNDNLLKFTLLQRLEAMDDRLQIKQEPEGSDSVEDTALLSQNNFEDRLVTYCQTLTSREWRQGEELSTSWFSSHRGMTLLHLAASLGYARLVCAMLHWRAENSSLLLETEVDALSQDEDGFTPLMWACAKGHVETAVMLYRWNHTALNIRNCSAQTALECAVANKQFDLAQEVEQLETRRERANMALLPSHHISITENIPLSPLAISPASSITSLASIASIASTSKSHDGVFLRPGAIASNLNSMRSNSNMGNSNGNGGDSTSSLLHRGSLHSQRLIKRPSVDSGIHLTAGQSSDSLISCRSKSSRQPVNRDIPKLSRFDRSMSLPLNSPLSNGDTNYDPSDIIRTSPIRKMDFALCEVAGGPRSVSPLIDVEAVSDDDREENRQNVVGEQDVRVFTLAEQIIAAIPDRIKNESEEMMLENSPRSHDSLLPSSTLTDVFMEPLLDHSTAASFEPVEFNFEFSDHNYRYYDVATPCSSLSPASSSCLQSPNSFTLDSPSPPPTTADFCEFFQASGSVFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRKKLEEQDKERAAAVLIQNYYRRYKQYAYFKQMTKAAMVIQNGYRSYCEHKRFKKNQETAVCIQNYYRDYSEQGSTGSREGTPSSGLKRTYSQRRQHQAARKIQQFMRQSKSKLQKERAEKERQVGRSVDVRPKSPSQEVNLTSTVQNNNSRSNSQNVDDLQSKRINDRTEQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00004658;
- 90% Identity
- iTF_01349638;
- 80% Identity
- -