Basic Information

Gene Symbol
Camta1
Assembly
GCA_034766995.1
Location
CM068314.1:36539561-36554401[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-35 8e-31 107.4 1.5 40 116 2 76 1 76 0.97
2 2 0.15 3.1e+03 -1.0 1.3 4 77 1300 1375 1297 1380 0.74

Sequence Information

Coding Sequence
ATGCTTTTGTACAGTCGCAAAAAAGTCCGCTACCGTCGAGATGGTTACTGTTGGAAAAAAAGAAAGGATGGAAAAACTACACGAGAAGATCATATGAAACTAAAAGTGCAAGGCACAGAGTGTATTTACGGATGCTACGTACATTCAGCCATTTTACCAACGTTTCATCGGCGTTGTTACTGGTTACTACAGAACCCTGACATAGTTCTAGTGCACTATCTTAATGTGCCGTATCCAGATGATAATAAATTAGCTGTTATCACCCCAAGTCTTGCACTGTGGGGTGATAAAAAAGAATGGACAAAAGATGAACTTGTATCGCAACTTAAGCCAATGTttttcagTGAAGATGAGCCAGATCTTAATAATGAATTAGAAATTTCTACAGCTGAAACTGTAGAAGCTATTGTTAGTCAATTAATGGAAAAACAACGTGTTGCTAGACAGGCTGCTTTAGTGAAACAATTAGAATGTGGTTGTCCTGATTCAACTTGTGCAGATGGAAAAACTTGTTCTCATCCAATGAGACGAATTACTGCTGCTAAAAACGAAGCTGTCGGTTGTAGTGAACAGTCATCTTTACCTAACACGTCTGTTTCAAGTTCTACTTCAAGGCAATTAAACGATGGCAGTAATCAAGTATCATCAACAACTGGCTCTGGAAGTATGCTGTTGACAACAAACAGTCATCCTCCTCGAGTTTATTCCCGTGAATCAAGATCTAATCATCATTCTCATAATTCTCATATGAATTCGCATGTCCCAAATAATACCAACCAAATAGCTACAACATCGGCACCTCCTCTCGTTTTAAGCTTATCTCAAATTCAAGGAGGTGGAGGGCTTTTGATCTTGAACAGTACAGCAAATACATCTGGCCATTCTGTCGTGTCACATCAATCTTTAACTTCTCCGGTGTCAGTAGCATCATTCGTCTGTAGTACTAATGATCAAGATAGAAATCATCACAGTAAAAATACGTCCCTTAAAACAAATACTCTCGTACTTAAACAGGAAGCAATGGATACAAATTCTCCATCATCCTGCTGTCTTCAGTCATCAGGAAGCGATACAAATGTAACAACTAGCATTTGCTCTATGAGTGTGAATCTTAGCCAAGGCTCAAAAATGGACGTCACGAATGGAAATGTACCAACAGTATTATTTGATGGAGTAACTTATGGAAGAAGAGATAAAGCAACAATTCATCATAATAGTGTGGTACCTATGTCAAGTGCACCATCAACACCTTCCAAACATATGGACACAAGCAGTGAcgatataatagattttaagcATAACTTTTGTGGTGATACTGTAGTTTTACTTGGTACTGATTCAAGTGGTTCTCTTATCAGTAAAAGCGATGGATCTTCTGTTATAAATGGAGGATTCTTTAATGAAACGCTGGATTTGTCACAAGAAGATATCCAACGAACTTTATCAGCAAACATGCCATTGTGTGCAAGTGAGATGGATCATCGAAATAACCCCAGTTCTGTTATCAGCAATGCAAATTCTCTTGTTACACGTAAACAAGGAAGAGAGAGTGAAGAAATGACATCAGAGGATGTAACAGTTTCGGAATTAAATCCAATGGATTTCATTGATTGCTCTGATGTAGTTGTTTCTCCGACTCACGTAGTAGATGATGATGTTTTTGTTAACTTAGATGCATTTGATATGCTTGGTGAATTTCCTGAACTTGAAGTACTCGATGGATCTGCTGGTGTGACAGGAGCAGAATCGAGTCCAGGGCATGAAGAAACATCTTCCCATGTAGAATATAGAGAGGGAACAGTGAATATTACGGATTATTCTCCTGAATGGGCGTACCCAGAAGGCGGAGTTAAAGTTCTCGTCACAGGTCCCTGGTATTCAACTACAGCTCCATACACAGTACTCTTTGATACATTCCCTGTTCCAACCACTTTAGTTCAGAGTGGTGTACTGCGATGTTACTGCCCagCACATGAAGCTGGTCTTGCTACTTTACAAGTAGCTTGTGAAGGCTTCGTCATCTCTAATTCTGTGATATTTGAGTACAAGTTGCCACCAAAAGAAGAGCAGACTACAACACAGGAAGCAAATACTGAGCGTCCTAATGATAATCTGCTCAAGTTCACATTACTGCAGAGACTAGAAGCAATGGACGATAGGcttcaaataaaacaagaacCAGAAGGTTCTGATAGTgTAGAAGATACTACACTCtttatacagaataattttGAAGATAGATTAGTTACATACTGTCAAGCATTAACTACTAGAGAATGGAGAAAAGGAGAAGAATTAAGTACTTCTTGGTTTTCAAGTCATAAAGGAATGACTTTATTACATCTTGCGGCGTCTTTAGGCTATTCGCGTTTAGTATGTGCAATGTTACACTGGAGAGCTGAGAACTCCTCATTACTGTTAGAAACAGAAGTTGATGCATTAAGTCAAGATGATGATGGTTTCACGCCATTgATGTGGGCATGTGCAAAAGGTCACACGGAAACAGCAATAATGTTATATAGATGGAATCATACTGCTTTAAATATCAGAAACATTTCATCACAAAATGCTCTAGAATGCGCTCGTGTTAACAGTTATACAGAACTTGCGAGAGAAATGGAAGAATTAGAAGCTAGACGAGAGCGTGCTAATATGGCTTTATTGCCATCAACAGCAAACTCTTCCATAGAAAATATAACGTCTTCTCCATTACCAATATCTCCTGCTAGTTCGATAGTATCTATTGCTTCTATTGCATCTACAAGTAAATCGCATGATGGTGTATTTTTGCGCCCCGatatgattttttatgtatatatttctagtGGCAGTTTATCAAGACCTACTCCTAGCCCTGGAAGTGCTTCCGAATCTTCCACATCACTCCATCGCAATTTTGGTACTTCACAATCACAACAAAGACTTATTAAACGTCCTTCTGTAGATAGTGGAATTCATATGACTAGTGGGCAATCCTCTGATAGTCTTTCATCACATACTCGATTAAGAAGTAATAAATTAGGATTTAGTAGAGACATACCAAAGTTATCaagATTTGATCGCAGTATGTCTTTACCATTAAATTCACCACCCTCAACGACTGACACTTCTTATGATAACTCTACggatatattgaataattctcCATACCGTAAAACagattttgttttatgCGAAGTGGCTGGGGGGTCACGCAGCAATAGCCCTTTGATTGACGTGGAGGCAGTGTCGGACGATGAATCGGAGAGACACAGTGTTGTAGGGGAACAAGATGTTCGAGTATTTACATTAGCAGAACAGATCATTGCAGCAATTCCTGATAGAATTAAGaatgaGAGTGAAGAAATGATGCTAGATCACAGTCCAGGACCTCCTGATAATATGGCACCACCCGACAGTCTTTCAGACGTTTTTATGGAACCATTACTTGATCAATCATCTGTATCAACTTTTGAACAAAcggaatttaattttgaattttctgaTCATAATTATCGGTATTATGATGTAGCCACACCATGTTCAAGTTTAAGTCCAGCTTCGTCAAGTTGTCTACAATCACCTAGCTCTTTTACATTAGACTCTCCGTCACCTCCACCCACTACTGCagatttttgtgaattttttcaaGCCTCTGGAAGtctttttgaaaaagatttttcaaatttaactcTTTCAGACCGTGAACAGCGAGAATTATACGAAGCtgcaaaaattattcaaaaagcaTACAGATCTTACAAAGGTCGCAAAAAATTAGAAGAACAAGATAAAGAACGTGCCGCTGCTATTTTAATCCAAAATTATTATCGTAGATACAAACAATACGCCTACTTCAAGCAAATGACACGTGCAGCTATGGTAATTCAGAATGGATACCGATCATACTGTGAACATAAACGTTTCAAGAAAAGTCAAGAGGCAGCAGTGTGCATCCAGAACTACTACCGCAACTACAAGGAGCAGGGGGGCAGGGGCAGCCGTGAGGGCACCCCTGCATCAGGGCTCAAGAGAACATATTCACAAAGAAGACAACATCAAGCAGCAAGAAAAATTCAACAATTCATGAGGCAATCAAAAAATAAattaCAGAAAGAACGAGCAGAAAAAGAGAAGCAGGAGGGCCAGTCAGTGGATGTCCGCCAAAAGTCGCCCCCTCGCGAGGGCAGTTCAACATGCATCGCCCCAAATAGCAGATCGGATAGTCAAAATATGGATATATCACAAACTAGTGCAAATGCAGAAAGAAGTGGGAAGCAgtga
Protein Sequence
MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWGDKKEWTKDELVSQLKPMFFSEDEPDLNNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKTCSHPMRRITAAKNEAVGCSEQSSLPNTSVSSSTSRQLNDGSNQVSSTTGSGSMLLTTNSHPPRVYSRESRSNHHSHNSHMNSHVPNNTNQIATTSAPPLVLSLSQIQGGGGLLILNSTANTSGHSVVSHQSLTSPVSVASFVCSTNDQDRNHHSKNTSLKTNTLVLKQEAMDTNSPSSCCLQSSGSDTNVTTSICSMSVNLSQGSKMDVTNGNVPTVLFDGVTYGRRDKATIHHNSVVPMSSAPSTPSKHMDTSSDDIIDFKHNFCGDTVVLLGTDSSGSLISKSDGSSVINGGFFNETLDLSQEDIQRTLSANMPLCASEMDHRNNPSSVISNANSLVTRKQGRESEEMTSEDVTVSELNPMDFIDCSDVVVSPTHVVDDDVFVNLDAFDMLGEFPELEVLDGSAGVTGAESSPGHEETSSHVEYREGTVNITDYSPEWAYPEGGVKVLVTGPWYSTTAPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACEGFVISNSVIFEYKLPPKEEQTTTQEANTERPNDNLLKFTLLQRLEAMDDRLQIKQEPEGSDSVEDTTLFIQNNFEDRLVTYCQALTTREWRKGEELSTSWFSSHKGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDDDGFTPLMWACAKGHTETAIMLYRWNHTALNIRNISSQNALECARVNSYTELAREMEELEARRERANMALLPSTANSSIENITSSPLPISPASSIVSIASIASTSKSHDGVFLRPDMIFYVYISSGSLSRPTPSPGSASESSTSLHRNFGTSQSQQRLIKRPSVDSGIHMTSGQSSDSLSSHTRLRSNKLGFSRDIPKLSRFDRSMSLPLNSPPSTTDTSYDNSTDILNNSPYRKTDFVLCEVAGGSRSNSPLIDVEAVSDDESERHSVVGEQDVRVFTLAEQIIAAIPDRIKNESEEMMLDHSPGPPDNMAPPDSLSDVFMEPLLDQSSVSTFEQTEFNFEFSDHNYRYYDVATPCSSLSPASSSCLQSPSSFTLDSPSPPPTTADFCEFFQASGSLFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRKKLEEQDKERAAAILIQNYYRRYKQYAYFKQMTRAAMVIQNGYRSYCEHKRFKKSQEAAVCIQNYYRNYKEQGGRGSREGTPASGLKRTYSQRRQHQAARKIQQFMRQSKNKLQKERAEKEKQEGQSVDVRQKSPPREGSSTCIAPNSRSDSQNMDISQTSANAERSGKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2