Sflv001547.1
Basic Information
- Insect
- Sipha flava
- Gene Symbol
- FTZ-F1
- Assembly
- GCA_003268045.1
- Location
- NW:839316-897564[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-17 4.9e-14 52.1 4.5 1 56 266 320 266 374 0.65 2 3 0.12 5e+02 -0.7 0.0 263 299 372 407 369 413 0.85 3 3 2.9e-72 1.2e-68 231.9 18.1 55 408 439 778 411 779 0.83
Sequence Information
- Coding Sequence
- ATGACGGCGCAACTGTCGGAGTACGCGACGATGATGGCGGGCGATAAGAACGGCGGCGATGGTGGTAGCAGCAGCAACGACAGCGGTGGCTTTGTCACGGTCGGTGCTGATGGCGACGGAACCGCCGTGGCCGGCGAACGGGTGGTGTTGTTCGCGTTCAAAATGGAAGACGAAGATTGCGCGGCGGACGTGGACGACGACTCGTCGCTCGAAATGCAAGACGTGGGATTACAACCGTTGGTGTTACCGACGCAGTCGCCGCCGTCGCCGTTCTCCGATGGCGATCAAGATAAAAAGTGCATGGACCTCAGTAATTTAAACGAAGATGATCAAACATTCATTGATGattcaaAGTGCATTGATTTGAGTCATTTGAGTGACGATGATCCTAATTTTATTGAAGGTGCCAACGGCGGCGGAAGCGGCGTCTCCGGTTCCATGGACGGCCTCCAGCAGTACGTGgccgtcggcggcggcggcggcagcggtggCGGCGGCACGCCCGTGGCCACCGGCGCGGCCGCGTCCATCAATCCGTCCACCGGTGGTTCCGAGCTGCCCGACACCAAGGAGGGCATCGAGGAACTGTGCCCGGTGTGCGGCGACAAGGTGTCCGGTTACCATTACGGTCTGCTCACGTGCGAGTCGTGCAAAGGCTTCTTCAAGCGGACCGTTCAAAACAAAAAGGTGTACACGTGCGTGGCCGAGCGCGCGTGTCACATCGACAAGACGCAAAGGAAGCGGTGTCCGTTTTGCCGGTTCCAGAAGTGTCTCGAAGTTGGCATGAAGCTCGAAgCTGTCCGAGCCGATAGGATGCGAGGTGGTCGAAACAAATTCGGTCCCATGTACAAACGAGACAGAGCGAGAAAGTTGCAGATGATGCGACAGCGACAGATGGCCGTGCAGACGTTGCGCGGTGGTGTGGTCACGTCGGCCGCAGCAAACAGTCACCACCAATTCGCCATGTTGGCCGGCGACGCGGTCACGCTGGGCCAATATCCAGGCTCGACTATCACCTCAACAGGTTCCAGTTTGCACATCAAACAAGAAATTCAGATTCCTCAGGTGTCATCGTTGACGTCGTCGCCCGACTCCTCGCCCAGCCCGATCGCCGTGGCTCTGGGCCAGGCAGGACTGGGTTCTCTGGCTACGGGTGCCGGAGTCACCACGTGCGCGGTCAACCAGCACTCGCAGATGACGTTGCAAATCGTCGCTTCCGCCAACggcaataacaacaacaacaacaacagcagtaACAACAATAACTCGGTGGTGACCAACATGAGTGGAACGAACGGCGGCGGACCCCCGTCGCAACACCAACAGCATCACCAGCAACAGCAAgcgcaacaacaacagcaacaacagcaacagcaaccgcagcagcagcagcagcagcaacaacaacaacaacaacaatcgGCCGGCGGTCCCGCAGCGTCCATGTTGTCCGTGAATAAAATGTGGTCACCTCCGTCGTCGCCGAAAAATTACCTGAtccaccagcagcagcagcagcagcagcaacaacagcagcagcaacaacaccACGTGCAGCAGCAACAGATGGTGGACGGCGGCGGCAGCTCGTCGGCCACGTCCAACGGTACCAGCGTTGTGACGGGCAGCAAGGGCATGCCGCCCATGATCCGGGAATTCGTGCAGGGCCTGGACGACCGGGAGTGGCAGAACTCGTTGTTCGGCTTGTTGCAGAGCCAGACGTACAACCAGTGCGAAGTCGACCTGTTCGAACTCATGTGCAAGGTGCTCGACCAGAATCTGTTCTCGCAAGTGGACTGGGCGCGGAATTCGGTGTTCTTCAAAGATCTGAAGGTAGACGATCAAATGAAACTGTTGCAGCACTCGTGGTCGGACATGCTGGTTCTGGACCACATTCATCAGCACATGCACAATAACTTGGCCAACGAGGTTATGTTGCACAACGGACAAAAGTTTGACTTGCTCGCTCTCGGTCTGCTCGGCGTCTCCTCGATGGCCGATTGTTTTGCCCGTGTCGTAGACCAGTTACAGGACCTCAAGTTCGACGTGGGCGATTATATCTGCTTAAAGTTCCTGTTGCTCCTAAACCCCGACGTCAAAGGAATCGGGAACAGTAAACACGTTCAAGAAGGTCATGAGCAAGTGTTGAAGGCCCTGATGGAATATTGCTTTTCGTTCAACACTCAAGtgccgGAAAAATTAACCAAACTGTTGACCGTGTTGCCCGATATCCATCACATAGCTACTAGAGGCGAAGAAAGTTTGTACTTGAAGCACTGTAGCGGTGGCGCTCCCACGCAGACATTACTCATGGAGATGCTGCACGCCAAGCGAAAATAA
- Protein Sequence
- MTAQLSEYATMMAGDKNGGDGGSSSNDSGGFVTVGADGDGTAVAGERVVLFAFKMEDEDCAADVDDDSSLEMQDVGLQPLVLPTQSPPSPFSDGDQDKKCMDLSNLNEDDQTFIDDSKCIDLSHLSDDDPNFIEGANGGGSGVSGSMDGLQQYVAVGGGGGSGGGGTPVATGAAASINPSTGGSELPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQMMRQRQMAVQTLRGGVVTSAAANSHHQFAMLAGDAVTLGQYPGSTITSTGSSLHIKQEIQIPQVSSLTSSPDSSPSPIAVALGQAGLGSLATGAGVTTCAVNQHSQMTLQIVASANGNNNNNNNSSNNNNSVVTNMSGTNGGGPPSQHQQHHQQQQAQQQQQQQQQQPQQQQQQQQQQQQQSAGGPAASMLSVNKMWSPPSSPKNYLIHQQQQQQQQQQQQQQHHVQQQQMVDGGGSSSATSNGTSVVTGSKGMPPMIREFVQGLDDREWQNSLFGLLQSQTYNQCEVDLFELMCKVLDQNLFSQVDWARNSVFFKDLKVDDQMKLLQHSWSDMLVLDHIHQHMHNNLANEVMLHNGQKFDLLALGLLGVSSMADCFARVVDQLQDLKFDVGDYICLKFLLLLNPDVKGIGNSKHVQEGHEQVLKALMEYCFSFNTQVPEKLTKLLTVLPDIHHIATRGEESLYLKHCSGGAPTQTLLMEMLHAKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00463371; iTF_00463425; iTF_00973139; iTF_00973075; iTF_01328662; iTF_01329065; iTF_01032921; iTF_01033080; iTF_01167646; iTF_01167758; iTF_00019232; iTF_00019065; iTF_00134304; iTF_00134578;
- 90% Identity
- -
- 80% Identity
- -