Acrc023314.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphis craccivora
Gene Symbol
FTZ-F1
Assembly
GCA_009835225.1
Location
VUJU01000259.1:61981-124225[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7e-19 4.7e-15 56.7 0.5 1 62 257 314 257 369 0.62
2 2 8.2e-72 8.2e-68 230.4 10.9 60 408 402 762 372 763 0.77

Sequence Information

Coding Sequence
ATGACGGCGCAACTGTCGGAGTACGCGACGTCGAGCCCGATGGCGGGCGACGAGAACGGCGGCGGCAGCAGCAGCAACGatagcggcggcggcgacgaatCCGCCGCAGGACGACGGGTAGTGATGATAGCGTTCAAAATGGACGACAACAATTGCGACATCGAAACGGTAGCCGGTCCGTCGCGAGACGATTCGAACTCGGAACCGCACGCCATAGTGCTGCAGCagtcgccgccgccaccgtcgTTCTCGTCGGACGGCAATACAGCTGatcAAAAGTGCATGGACCTCAGTAATTTAAATGAAGATGATCAAACATTCATCGAAGattcGAAGTGCATGGACTTGAGTCATTTGAGTGACGATGATCCCAATTTCATTGAAGGTGGAAACGGCGGCGGAGGAAGCGGCGGCGTGTCCGGTTCCATGGACGGACTCCAGCAGTACGTGGCCGTCGGCGGAAACGGCGGCGGTACGCCCGTGTCCGCGGCCGCGGCTGCCGTCAACCCGTCGGCCACCGGTTCCGAACTTCCTGACACCAAGGAAGGCATCGAGGAACTGTGTCCCGTGTGCGGCGACAAGGTGTCCGGTTACCATTACGGTCTGCTCACGTGCGAATCGTGCAAAGGCTTTTTCAAGCGGACCGtgcaaaacaaaaaagtgTACACGTGCGTGGCCGAGCGGTCGTGTCACATCGACAAGACCCAAAGGAAGCGGTGTCCGTTCTGCCGGTTCCAGAAATGTCTAGAAGTCGGCATGAAACTCGAAGCCGTTCGGGCGGACAGGATGCGAGGAGGACGAAACAAATTCGGTCCGATGTACAAACGTGACAGGGCGAGAAAGTTGCAGATGATGCGTCAGCGACAGATGGCCGTGCAGACGTTGCGCGGCGGCGTGGTCACGTCGGCCGCAGCCAACAACCACCACCAATTCGCCATGTTGGCCGGCGACGCGGTTACGCTAGGCCAGTACCCAGGCTCCACCATCACATCATCGGTGTCCAGTTTGCACATCAAACAAGAAATTCAGATTCCCCAGGTGTCTTCGTTGACGTCCTCACCCGACTCGTCTCCCAGCCCGATCGCCGTGGCTCTGGGCCAGGCCGGACTCGGGTCTCTGGCCACGGGCGCCGGAGGCACCACGTGCGTAGTCAACCAACACTCGCAAATGACGCTGCAAATCGTGGCATCGGCCAAcggcaacaacaacaacaacaacaacaacactagcagcagcaacaacaacaacagcacGGGAGTGACCAACATGACCGGAGCGAACGGCGGCGTGCCGCCTTCGCCGCTCCAGCAACATCACCAGCAGGCGCAGCAgcaacaacagcaacagcaacagcagtCGGCGGTCCCGGCCGCGTCCATGCAGTTGTCCGTCAACAAAATGTGGTCGCCACCGTCGTCGCCCAAGAACTACCTGTTGTCCGCGCAccagcagcaacagcaacagcagcagcaccACGTGTCGccgcaacagcaacagcagcaacagcagatGGTGGACGGCGGCGGTAGCACGTCGACCGCCGCGGCCGCGACCGCCAACGTGGTCGGCGGCACCGGCGTCAAAGGCATGTCGCCCATGATCCGGGACTTTGTGCAGGGCCTGGACGACCGGGAGTGGCAGAGCTCGCTGTTCGGCCTGTTGCAGAACCAGACGTACAACCAGTGCGAGGTCGATCTGTTCGAACTCATGTGCAAGGTGCTCGACCAGAATCTATTCTCGCAGGTGGACTGGGCGCGGAACTCGGTGTTTTTCAAAGATTTGAAGgtgGACGACCAGATGAAACTGTTGCAGCACTCGTGGTCGGACATGCTAGTGTTGGATCACATCCACCAGCACATGCACAACAATCTGGCCAATGAGATCATGTTGCATAATGGGCAAAAGTTCGATCTGCTCGCGCTCGGCCTGCTCGGCGTCACCTCGATGGCCGATTGTTTCGCCCAGGTCATCGACAGGTTACAGGAGCTCAAGTTCGACGTTGGCGATTACATTTGCTTAAAGTTCCTGCTACTGTTGAACCCCGATGTCAAAGGGATCGGTAACAGTAAACATGTTCACGAAGGTCATGAGCAAGTGTTGAAGGCTCTGTTGGACTATTGCATCACAGCCAATTCTCAAGTACAGGACAAATTTACCAAGTTGTTGTCTGTGCTACCAGAAATCCATCACATAGCCACCAGGGGCGAGGAGAGTCTCTACTTGAAGCACTGTAGCGGCGGTGCTCCCACGCAGACGTTGCTCATGGAGATGCTGCACGCCAAGCGAAAATAA
Protein Sequence
MTAQLSEYATSSPMAGDENGGGSSSNDSGGGDESAAGRRVVMIAFKMDDNNCDIETVAGPSRDDSNSEPHAIVLQQSPPPPSFSSDGNTADQKCMDLSNLNEDDQTFIEDSKCMDLSHLSDDDPNFIEGGNGGGGSGGVSGSMDGLQQYVAVGGNGGGTPVSAAAAAVNPSATGSELPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQMMRQRQMAVQTLRGGVVTSAAANNHHQFAMLAGDAVTLGQYPGSTITSSVSSLHIKQEIQIPQVSSLTSSPDSSPSPIAVALGQAGLGSLATGAGGTTCVVNQHSQMTLQIVASANGNNNNNNNNTSSSNNNNSTGVTNMTGANGGVPPSPLQQHHQQAQQQQQQQQQQSAVPAASMQLSVNKMWSPPSSPKNYLLSAHQQQQQQQQHHVSPQQQQQQQQMVDGGGSTSTAAAATANVVGGTGVKGMSPMIRDFVQGLDDREWQSSLFGLLQNQTYNQCEVDLFELMCKVLDQNLFSQVDWARNSVFFKDLKVDDQMKLLQHSWSDMLVLDHIHQHMHNNLANEIMLHNGQKFDLLALGLLGVTSMADCFAQVIDRLQELKFDVGDYICLKFLLLLNPDVKGIGNSKHVHEGHEQVLKALLDYCITANSQVQDKFTKLLSVLPEIHHIATRGEESLYLKHCSGGAPTQTLLMEMLHAKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01346481;
90% Identity
iTF_01328662;
80% Identity
iTF_00134578;