Suni015464.2
Basic Information
- Insect
- Silvanus unidentatus
- Gene Symbol
- bab1
- Assembly
- GCA_963930825.1
- Location
- OZ005761.1:20808885-20817039[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-18 1.4e-14 53.7 0.0 1 43 68 111 68 113 0.95 2 2 1.7 2.5e+03 -1.6 1.3 6 15 197 206 195 210 0.87
Sequence Information
- Coding Sequence
- ATGTTTGTTAAGTTTACTCCCAATGCACCACATGCTAAATTGCTCGAATCCTCGCACGCCTGGCTAGGCGCCTCTACCTCCTCAATAGCCGCAGACAGCTACCAGTACCAGTTGCAATCAATGTGGCAAAAATGCTGGAACACGAATCAAAGTCTTGTACATAACTTGCGCTTCCGTGAACGAGGACCTTTGAAATCGTGGCGACCTGAGACTATGGCAGAGGCGATTTTTTCCGTACTCAAAGAAGGTTTATCACTATCACAGGCAGCTAGAAAGTACGATATTCCATATCCCACATTCGTCTTGTATGCGAATAGAGTGCACAATATGTTAGGGCCTTCGGCAGATGGAGGATCAGACTTACGACCGAAAGGTAGGGGAAGACCGCAAAGAATATTGTTAGGGGTTTGGCCTGATGAACATATACGGGGTGTAATACGAGCGGTAGTGTTTAGAGATTCACATCAAATTAAGGACGAGCCGCATTTATCTTACCCAAGATTGCATGACGGAGTAACAATCCAAAGTTACCCCAACAATTCGTGTAGTAATGGATCGGATCCGAATGTGTCACCTGGGGCGGCAGCTGCAGCAGCTGTGGCCGCCGTGGCACAGGGTCTCCGGCAACAGATGTGCAGTATGGTGGCGGCGGCACACAATCAAAGTTCCGCACACGATACAAATCCGGTTGCCAGTTTAGTGAATTCGTTAGCATTGGCGGGCCATTGTGGCAATGTGTCGTTGCCGAGCAATGGGGCACCGCCGATGAGTATGAGCCATATAGCTTCCATGCGTTGTATGAGCAGTCCGGCGGGCAGTATACAAGATTTGCGGATATCGCCATCCGAGTCGGCATTAGATAGTCCAATTTCGTCGCCACTAGGTTTAACGGTGTCTAGTTCCATGGAGCCCGcaatcaatatgaatattgGGAATAGTATGGACGTGGGGATCGGTGTGTCGGGGATGACATACAAGCCGGCCAGATCGTTTACGTCGCCCAGGCCGGAGAACCTCTTCCAGGAAGACATTGACGATCTGGTCAAGCCAATGCACACTTCCACACCACGTCCAAAAGATACAATGGCTTCAATTAAAATGGAACCATTAGCAGAATGTCGTGGCGAATGA
- Protein Sequence
- MFVKFTPNAPHAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKDEPHLSYPRLHDGVTIQSYPNNSCSNGSDPNVSPGAAAAAAVAAVAQGLRQQMCSMVAAAHNQSSAHDTNPVASLVNSLALAGHCGNVSLPSNGAPPMSMSHIASMRCMSSPAGSIQDLRISPSESALDSPISSPLGLTVSSSMEPAINMNIGNSMDVGIGVSGMTYKPARSFTSPRPENLFQEDIDDLVKPMHTSTPRPKDTMASIKMEPLAECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- iTF_01310257;
- 80% Identity
- -