Sbem006904.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000237.1:426941-431273[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-07 2.1e-05 24.5 0.0 1 42 19 60 19 62 0.95
Sequence Information
- Coding Sequence
- atgcctcgcaaatataagcgaaaaccaggcgtggtgccacgtaacatcaactggaccgaagatagcttaacccttgctttggaagaattgagagaaaagaaaaaaggtatcaatgaaatttctcgaacgtacggaatatcctctcgaactttaagaagacgctacgaaacaagtaaccagcaactgctaactcaaggaaaatatcctgttcttggcttcaaaaatgaaaaaagactggaaccttttatattgaagctcggagacgccggttttcctcctgacagaattgtgattcgccaattagcttatcagtttgccgaaaagttgaaattaaaacacagtttcaacaatgagaatgaaatggctggatcacaatggctaaaaagctttcttgaaagaaatcctgaaatagctttgagacaagctgagggtatatcaattcaaagagcgaagggtctcaacagaacagaagtTGCAAATTTTTTCAAACTCTTATTAACTACTTTAACTGAGAATAATTTGCTGGATAAGCCAGATAGAATATTTAACATGGATGAAACCGGTATCCAATTAAATAATAAAATTGGTAAAGTATTAGCTAAAAAAGGCACTAAAGCAGTTAAATCAGTTACTTTCGGTGAAAAAGGAGAAACAATTACTGTTGTTGCTTGTTGTAACGCTATTGGCAATTTTCTCCCACCGGTTCTGATTATTAAAGGCGTAAAGAAGAAACCAGAATTCGAAGAGGGACTTCCGCTTGGTTCTCAAGTTTACATGCAAAAGAAATCGGCATATATTACCGCAGATCTTTTTTATAAATGGCTGACTGAACATTTTATTCCACGCAAACCGCCAGGGAAGGTATTACTGATTTTGGATGGTCATTCATCGCATTCAAGTGCTGTCAATATGCTAGAAACTGCTCGGGACAATGATGTGATATTACTTTGTTTACCTAGTCACACTACTTCAGCTTTGCAACCATTAGATGTATCAGTATTCGGACCATTTAAAAAATATTATAATACTGAGACAAATAATTTCATGCGTACCAATCCACAAAAAAAATTGAATCGGTACAACTCGGGTCAGCTAATATCCAAGGCATGGATTCGAGCAGCTGTCCCCGCCAATGCAATAAGTGGTTTTCGTGGCAGTGGAATCTACCCAGTCGAACCAAATGCTCTATCCGACGCTGAATTTGCTATATCAGATCTAGCGTTGGGGAAACTTGCGCAGGAACGAGAATCTAATCCGCTAAATGATCAAgtaccaggcgtttccggagtgtctgcgttaagaaaGCACTCACAAGATTCTGAGCAAGGTTTTGCGTCAAATGAAAGAGGCCAAGTGTCATCCCTCAGCAAACAAGTACCAGGTATTTGTACCGTACCGGAATCCGAGTCTAATCAAGGTCTACATCATCGAAACAAACTGCTTCCATCAGGATATCAAGTTCCAAGTAATGCTGATAATCTGGAAATTATCGTACATGAGTCTGAACAGAATAACGTGAACCAAAATCTTACGCCACCGAGGCCGCCTTTAAGCCTATTAAATTTGTCTCAAGACTGTTTAGCCTTAGAAGATCGCGACATTGAAGATTACATCTTTGATAATACTGAGAGAAAACAAAACTTGGCTGCTGCTCTCACTGGAACAACTTGCTCGGAGTCTTGCGGAGAGCGCAAATTTTAA
- Protein Sequence
- MPRKYKRKPGVVPRNINWTEDSLTLALEELREKKKGINEISRTYGISSRTLRRRYETSNQQLLTQGKYPVLGFKNEKRLEPFILKLGDAGFPPDRIVIRQLAYQFAEKLKLKHSFNNENEMAGSQWLKSFLERNPEIALRQAEGISIQRAKGLNRTEVANFFKLLLTTLTENNLLDKPDRIFNMDETGIQLNNKIGKVLAKKGTKAVKSVTFGEKGETITVVACCNAIGNFLPPVLIIKGVKKKPEFEEGLPLGSQVYMQKKSAYITADLFYKWLTEHFIPRKPPGKVLLILDGHSSHSSAVNMLETARDNDVILLCLPSHTTSALQPLDVSVFGPFKKYYNTETNNFMRTNPQKKLNRYNSGQLISKAWIRAAVPANAISGFRGSGIYPVEPNALSDAEFAISDLALGKLAQERESNPLNDQVPGVSGVSALRKHSQDSEQGFASNERGQVSSLSKQVPGICTVPESESNQGLHHRNKLLPSGYQVPSNADNLEIIVHESEQNNVNQNLTPPRPPLSLLNLSQDCLALEDRDIEDYIFDNTERKQNLAAALTGTTCSESCGERKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341199; iTF_01341198; iTF_00279061; iTF_00279062; iTF_00279064; iTF_01280216; iTF_01081534; iTF_00279060; iTF_01081536;
- 90% Identity
- iTF_01081534;
- 80% Identity
- -