Sbem010372.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000355.1:341348-341785[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-09 3.4e-07 30.2 0.0 5 39 1 35 1 40 0.88 2 2 2.8 3.6e+02 1.3 0.0 9 18 40 49 37 51 0.86
Sequence Information
- Coding Sequence
- atgaaaaaagctgttgaagctgtacgaacgaaagaaatgggttataaaaaggcagtaaagttatttaacgtcccaagagctaccttgaaagattacgtgaaaaattctgaaaaatctatagaaaatgtagtttccgggaaaatgggaagaagactagttttgccggtagaattagaagaggagctggtaaactattgcttgcaaatggagaagaattactatggtgttactgcttctgatttaaaacgaatggcttttcaattggctatgaggaataatattccacatccattttcacagaccataaagaaggcgggcaaaaaatggatgaagttatttatggctcgtcatcctgatttgtcattccgtaaaccagagtccttatcacgagctcgtgtacaaggttttaatgcagaaaacgttaagacttttttttga
- Protein Sequence
- MKKAVEAVRTKEMGYKKAVKLFNVPRATLKDYVKNSEKSIENVVSGKMGRRLVLPVELEEELVNYCLQMEKNYYGVTASDLKRMAFQLAMRNNIPHPFSQTIKKAGKKWMKLFMARHPDLSFRKPESLSRARVQGFNAENVKTFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00761584; iTF_00455948; iTF_00455940; iTF_00455951; iTF_00376179;
- 90% Identity
- -
- 80% Identity
- -