Dgla006108.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- CAVNZG010001153.1:62496-62957[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-07 0.00052 22.1 0.0 10 38 14 42 8 47 0.84 2 2 2.5 2e+03 1.0 0.0 9 18 48 57 45 58 0.88
Sequence Information
- Coding Sequence
- aTGCCAAAGAGAAAGTTGTGGGATCCGGAAGCAATGGAAAAAGCTGTCCGAAATAAAGAAATGCGTTATAAAAAAGCAGCTAAGCTATTTAATGTTCCAAGAGCTACTTTGAAAGATTACTTGAAAAATTCTGATAAATCTATAGAAGATATAATTTCTGGGAAAATGGGACGAAAACCAGTTTTGTCAATTGAACTAGAAGAGGAGTTGGTAAACTATTGCTTGCAAATGGAAAAGAATTACTATGGTGTCACCGCTTCTGATTTAAAACCAATGGCTTTTCAATTGGCCATCAGAAACAATATTCGACACCCatattcacaaattaaaaaaaaagcagGTAAAAAATGGATGAAGTTATTTATGGCTCGCCCTCCTAACTTGTCATTTCGCCAACCAGAATCGTTATCACGAGCTCGCGTGCATGGTTTTACTACAGAAAGCAGAATGGTTTTACGTTAA
- Protein Sequence
- MPKRKLWDPEAMEKAVRNKEMRYKKAAKLFNVPRATLKDYLKNSDKSIEDIISGKMGRKPVLSIELEEELVNYCLQMEKNYYGVTASDLKPMAFQLAIRNNIRHPYSQIKKKAGKKWMKLFMARPPNLSFRQPESLSRARVHGFTTESRMVLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341126;
- 90% Identity
- iTF_00455951;
- 80% Identity
- -