Hpyr020794.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015603.1:2744849-2745400[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-09 9.6e-07 28.8 0.0 1 38 9 47 9 50 0.93 2 2 2.1 5.4e+02 0.8 0.0 9 18 52 61 49 62 0.90
Sequence Information
- Coding Sequence
- ATGATGCCAAAGAGAAGGTTATGGGATCCTGAAGCAATGAAACAAGCTATTGAAGCTGTACGAACTAAAGAAATGGGGTATAAAAAGCCAGTTAAATTATTTAATGTGCCAAGAGCTACTTTGAAAGATTATGTAAAAAAGTCTGACAAGCCTATAGAAGATATAGTTTCTGGAAAAATGGGAAGAAAACCAGTTTTGTCACCTGCATTAGAAGAAGAGTTGGTGAACTATTGCTTGCAAATGGAAAATAATTACTATGGTGTGACCGCTTCTGATTTAAAACGAATGGCTTTTCAATTGTTTATCAGAAATAATATTCCACACCCATTTTCACGAACCAAAAATAAAGCAGGTAAGAAATGGATGAAGTTATTTATGGCTCGTCATCCTAACTTGTCTTTTTGCAAACCAGAATCGCTATCACGAGCTCGCATAGAAGGTTTTACTGCAGACAATGTTAAATCCTTTTTTTGA
- Protein Sequence
- MMPKRRLWDPEAMKQAIEAVRTKEMGYKKPVKLFNVPRATLKDYVKKSDKPIEDIVSGKMGRKPVLSPALEEELVNYCLQMENNYYGVTASDLKRMAFQLFIRNNIPHPFSRTKNKAGKKWMKLFMARHPNLSFCKPESLSRARIEGFTADNVKSFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341126;
- 90% Identity
- -
- 80% Identity
- -