Basic Information

Insect: Sesamia nonagrioides
Gene Symbol: -
Assembly: GCA_017933935.1
Location: JADWQK010000133.1:365474-373861[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.4 8.2e+02 2.4 4.0 1 23 89 111 89 111 0.96

2 18 0.0018 0.28 13.3 1.0 2 23 117 138 116 138 0.97

3 18 2.2 3.4e+02 3.6 1.4 1 23 144 166 144 167 0.94

4 18 0.22 34 6.8 3.4 2 22 399 419 398 419 0.95

5 18 0.092 14 8.0 2.6 1 23 515 537 515 537 0.95

6 18 3.4 5.1e+02 3.1 0.3 2 23 674 695 673 695 0.95

7 18 0.0012 0.18 13.9 0.5 2 23 775 796 774 796 0.96

8 18 0.069 10 8.4 0.2 1 23 804 826 804 826 0.97

9 18 5.4 8.1e+02 2.4 2.6 1 23 863 885 863 885 0.93

10 18 0.00026 0.039 16.0 4.0 1 23 893 915 893 915 0.99

11 18 0.11 17 7.7 1.9 1 23 994 1016 994 1016 0.99

12 18 0.81 1.2e+02 5.0 0.1 2 19 1101 1118 1100 1122 0.92

13 18 0.0024 0.36 13.0 1.0 1 23 1186 1208 1186 1208 0.96

14 18 0.005 0.75 12.0 0.3 1 23 1214 1236 1214 1236 0.97

15 18 0.0072 1.1 11.5 2.6 1 23 1325 1347 1325 1347 0.97

16 18 0.00018 0.027 16.5 1.4 1 23 1353 1375 1353 1375 0.99

17 18 0.36 54 6.1 2.9 1 23 1468 1490 1468 1490 0.96

18 18 0.011 1.6 10.9 5.6 1 23 1501 1523 1501 1523 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.4	8.2e+02	2.4	4.0	1	23	89	111	89	111	0.96
2	18	0.0018	0.28	13.3	1.0	2	23	117	138	116	138	0.97
3	18	2.2	3.4e+02	3.6	1.4	1	23	144	166	144	167	0.94
4	18	0.22	34	6.8	3.4	2	22	399	419	398	419	0.95
5	18	0.092	14	8.0	2.6	1	23	515	537	515	537	0.95
6	18	3.4	5.1e+02	3.1	0.3	2	23	674	695	673	695	0.95
7	18	0.0012	0.18	13.9	0.5	2	23	775	796	774	796	0.96
8	18	0.069	10	8.4	0.2	1	23	804	826	804	826	0.97
9	18	5.4	8.1e+02	2.4	2.6	1	23	863	885	863	885	0.93
10	18	0.00026	0.039	16.0	4.0	1	23	893	915	893	915	0.99
11	18	0.11	17	7.7	1.9	1	23	994	1016	994	1016	0.99
12	18	0.81	1.2e+02	5.0	0.1	2	19	1101	1118	1100	1122	0.92
13	18	0.0024	0.36	13.0	1.0	1	23	1186	1208	1186	1208	0.96
14	18	0.005	0.75	12.0	0.3	1	23	1214	1236	1214	1236	0.97
15	18	0.0072	1.1	11.5	2.6	1	23	1325	1347	1325	1347	0.97
16	18	0.00018	0.027	16.5	1.4	1	23	1353	1375	1353	1375	0.99
17	18	0.36	54	6.1	2.9	1	23	1468	1490	1468	1490	0.96
18	18	0.011	1.6	10.9	5.6	1	23	1501	1523	1501	1523	0.98

Sequence Information

Coding Sequence: ATGGTTCACGCAGGATCAAAGCCAACTCCAGTGGCTAGTAAAGTGGAAGCAGAGCTATCACCTCTCTCAAACGATAACATGGAGCCACTAGACCGCATTGAAGACATGTTTGAGGAAGTCGAGGACTGCGAGGATATGATGATGGAAGTAGATGATGACTCAATGGACCAACCTGATGATATCGACGGTGACTGCGATAGGAGTGTTGACTACGCATCGACCTCCTATCGTAGGGCACATCTGTCAAAAGCTAATGGCAAATTCTTCTCATGCGATAAGTGCAACTATGTCACCCACATAAGAGCTAGATTCACAAAGCATGTCAAGTATCATTCGATGCCTAtgattaagtgtacaatgtgtgATTTTCGAACTCCATACAAGTGGAATTTGGACCGCCACATGAAGAACCACGGTGGAAGTGGGAGTTTCAATTGTTCGATGTGCAACTTCACGGCAGACATCAAGCAGAGTCTGACAGTACACGAAATGAATCATCACACACCGTTGGCGGGCCAATCGCTGTCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATCGCGGAGTTCGACGCAACGAGCACGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACGTCTCGGACATGGGTCTCCAGTACGCAGAGAGAGAACTAGTCAGTTGTAAAAGTGATTCCAATGATGGTACAGCATCTGACGCACTTACCAGAAAAGAGACTTCGCAAGACGGTTATAGCCAGCTTTCCCCAACCCACAGTTCAGACgggaaacaacaaaaacaaagcaGAAAGGTTCCTCGTCCAATACCACAACTCATACCGTTAAATTCCTCAACACCTAACCAAAAACAAACATGCTCCGGAGAACCGCCACAGAAAAAGTTCAAGGGATCTTTACCCATCGACATTGACGATGTGTCAGCGGAAAATACTCTTCTACCAACAAATCCATTAATAAAAGAGACTGCGGGTCGAAAGAAAAATGAATCGTTCTTCGACAGATTGAAAGAAAGATTGTTAACAGAAACCGGCGAAGAAGGTTCACTAATATGCAAGAACTGTGGATTTGAAAGTAAATGCTTATCAGAACACTCTGTCCACGAGAAAAATTGTTCGCCGCAAACGAACCGGATCAATGCAAACACCTCGCTCGCAAGTTTAAGTTCTACTCGATGCCAGAATTGCAGGCACAGGTGCAAATCTAGTGCCGACTTATACATCCACATGCAAACTTGCGGCAAGAGCGAACAAATTGacgatgaaaataataaaaatgagaaTAGTAATGATGAAGTCATTCCAATCCATGAAAAAGAGACAGAACCTCACCCAATGGAAAACGTCGTTTTCGTATGGAACAACATTAACCATGACTCTAACAAGTTTGATGTACCTCTagacataaatataaatgatgATTCCACGCTACCAGAAATACATCGAAGTTTTGACGCTGAGATTGTCGATGAAAATGAAAGCATGAATTTATCGCCGAGTCAAGCTATTGGAAGGAAGGTATTTAAATGTCCACATTGTCCATTTTTCTCCACAACAGCATCGAGATTTCACGTTCATATCGTGGGCCACTTAAACAAAAAACCGTTTGAGTGTTCCCTCTGCAAATACAAATCTAATTGGAGATGGGATATAACCAAACACATTAAATTGAAGTCTGCAAGGGACCCGGAGCATAACGAAGCAAAGGTACTTATGACTGATGAAACAGGAAGAAGAAACTATAGCAAATACAACAAATTCTTGGCAATGcctgttttaaatgaaaatagcgAAAATGAGTTTCATTACTTGGACCCTAACACTGCAGTGGATAACTCAATGGAAATGGATGAATCATTTAACGATATATCAGACGTTATGAACGTTCAATTTGAAATGCAACCGCTTAACTTACAGACTCAACATAGTGAAGATAATTACAACTTTATTGATAACAGAGGTCTCAATGATATGAAAAAACCCAAGAAAACATTATGGAAATGTAAAAGATGTAATTACAAagATCCTTCAAGAGAAGCTCTTTTAGAACATGTTCGTGAACACTCCAGATCGGATGGCGTCCATGACGAACTAAGTAAACCGCCTATTAAGAAACCTGAAAATAATACTCCCGACCCAGCAGACCTGGCGTATCGTTGTGGCCATTGTAATCAATTGTCTAATTGGAAACATGTTATACAGCGCCATTGCCGATTAAAACACGACGGAGTGATCAAAGTTATAACTACAGTTAAACCAAAACCGGATCCACCGATGAACATCAATGAGATCAACATTGATACTTGCAACAAATGCCCGTACAGGACGAGTGACAAGAAACTACTCATTGCCCATTTACAACAACATCAGCCCTCGCCTAACTCCATCTTCAAGTGCTACTTCTGCCCATACTTCGTAAAGGATGAGCCAGAATTAATCTCTCATCTACTCCTGCACGGTATCACTGATCCAGAAGATTACATCGCAAAAGCAATGGGAACCAAATCCCCAGGACCTCCAGAACCTCAAGCACCTGTTACCACGACATCAAACTCCACCAAGCGACACAAATGCATAGAATGTCCATACGAAACAAATAGTAAGTCACAATTTATGTACCATGAACAATTTCACAGACTTCCGGCTGACACGCCTTATAAATGCCCAGAATGCAACTACAGTGTATCTAAGAGACACCTGCTGCACCAGCATCTGCGTGTACACGGAATCAAAAGAATTGAAACCGAGGCTGAATTAGAAGCAGCACAAAGCAAGGTAGCTAAAATGGACTTCCAAATTAATCTTGATGAAATACCTTACGTCTGGGTTTCAGCCAAGAATGAATTCCATAAGATGTACAAATGTCGATATTGTTCCTATGTTAATGctgtaaaaagtaaaataccAAATCATGAAAAAATTCATTGCATCGTATTCGAAAACAGTGATTCAACTATTTACAAGTGTTTGGAATGCAAATTCACATGTGATAATGCCGGCAGGCTAGCCGAGCATTCTAAAACTCACGGGGAAATATATGGTCGCATTTATTGTCCCGTTGAATATGACGTGCCCGATGATGAACAAATCACTAAATTGAGAAAGGTTATAGAAATTGAAAAGTCAGCAAATCCAGAAGGTTTCAGTAGAGATGAAGGCACTACGCAAGAATTaagagaaataaaattattatatttttgtcaaaagtGCCCGGCAAGGTTCTTTGAAGACGCCGAGCTCGACGTTCATGAAAAATGTCATGATGTATCATTGccaaataaatgtaaaatatgtgacttTTCAGTCACCGAAGAAAACGAATTAGCAGCACACGACATCGTACATACAGATGAATATCACACAAAAACAAAGATGCTTAAATTTGTTCATCACTCACATCCTTTGCACAAACAACCCATGTTAGATTTTGTTCTCTGTCAAGATACCTCAGAGGTTACGTGGCGAGCCACAGGGCCATGTAAACCTGAATATGTCGAACCTCCTATGAAAAAAGATAAACACGTGCcaaaacaatattattgcaaACAGTGTCCAGCTAAGTTCTTCAAAAGTTCCGCGCTTACCTATCATATGGGGCTACACGGAGGTGATGGCGAGTTTAAGTGCAAAAAGTGCAACTACGCCGTAAAAAACGTTGGGAATCTAGGCAAACACGAATTAGTTCACGAAAATGAGAACAAGGCTACTTGTGACTATGAATCTGGTGAAGATAtggattataaaaatattccttTGTCGGGCACAGATTTGTTCCAAAGAAAGACTGAGGCCCAGAAAAGAGTATTAAATGATAAAGATAAGTTAGTTAAGCCAAACGATCATTTTCCGCCTGTCCTACAAGCCGATCCTCAATTCGGTTATTTAATGCATGGCAATCCTGAATTTATATATCCCACGTACCTGAAAAATGGACGTCAAAAAGAAAAGCGATACAAATGCCACAAGTGCCCCTCAGCTTTTGAGAAAAGAGAACAATATAAAATTCATTTGTCATTGCACGGCTCCAAGCAAAGATACAAATGTGAGTTATGTGATTATTCAGTAAAATATTACGCTAATTACGTTCAACATATGCGTAAACATCAAATGAACGATGAAGCTCAagctgaaagaaagaaaggtaATAATGATTTTACAGAATCTGAACATCAAGAAGACGTTAAGCAAGATGACAGTAGTGATAACATTAAACTTGCAATAAAAACTATACCAAAAGGAGGTGCTAAAAGCGACTTTCAACAATTCTCAATCAGTGACCAGCAAACGCTCAGACTGCTACAGAGGAGGCGATCAATGAATATTAATTCTGGAAAAGAACTCAGCACTTCTGAAACTTCACCGGCCAAAGAGCGCAAAATGCACATGTGTTTATTATGTCCCTACACTAACCAACGTCAAGATTCTCTAACCAATCACTACAGAAGGCACGGAGACACCGACATTCTGAACGGAGGAAGTCATAAATGTTCCCATTGCGACTTAGTGGTTGTACAGTCGCATTTCCTACGGGAACATCTGAAGACACACTTCAATTACCACAAAACTCTTAGTCCCGAATGTTTTGTGGCTAACGAAGCTGTTCATTTTACCATAAAAAAGTTGGATGAAGATAGTGAATTAGTTGATCTCAAATTAGACATGCAGACCAAGAGTTTTTCATGTAATGACGAAAAGataattgttaaaattaaaactggAGAACTATTGGTAGAATAA
Protein Sequence: MVHAGSKPTPVASKVEAELSPLSNDNMEPLDRIEDMFEEVEDCEDMMMEVDDDSMDQPDDIDGDCDRSVDYASTSYRRAHLSKANGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPLAGQSLSSRRRNRVGASDTVIAEFDATSTLLPKEEEGSGDSRSSHVSDMGLQYAERELVSCKSDSNDGTASDALTRKETSQDGYSQLSPTHSSDGKQQKQSRKVPRPIPQLIPLNSSTPNQKQTCSGEPPQKKFKGSLPIDIDDVSAENTLLPTNPLIKETAGRKKNESFFDRLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCSPQTNRINANTSLASLSSTRCQNCRHRCKSSADLYIHMQTCGKSEQIDDENNKNENSNDEVIPIHEKETEPHPMENVVFVWNNINHDSNKFDVPLDININDDSTLPEIHRSFDAEIVDENESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPVLNENSENEFHYLDPNTAVDNSMEMDESFNDISDVMNVQFEMQPLNLQTQHSEDNYNFIDNRGLNDMKKPKKTLWKCKRCNYKDPSREALLEHVREHSRSDGVHDELSKPPIKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRTSDKKLLIAHLQQHQPSPNSIFKCYFCPYFVKDEPELISHLLLHGITDPEDYIAKAMGTKSPGPPEPQAPVTTTSNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIKRIETEAELEAAQSKVAKMDFQINLDEIPYVWVSAKNEFHKMYKCRYCSYVNAVKSKIPNHEKIHCIVFENSDSTIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEYDVPDDEQITKLRKVIEIEKSANPEGFSRDEGTTQELREIKLLYFCQKCPARFFEDAELDVHEKCHDVSLPNKCKICDFSVTEENELAAHDIVHTDEYHTKTKMLKFVHHSHPLHKQPMLDFVLCQDTSEVTWRATGPCKPEYVEPPMKKDKHVPKQYYCKQCPAKFFKSSALTYHMGLHGGDGEFKCKKCNYAVKNVGNLGKHELVHENENKATCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNNDFTESEHQEDVKQDDSSDNIKLAIKTIPKGGAKSDFQQFSISDQQTLRLLQRRRSMNINSGKELSTSETSPAKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDILNGGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLSPECFVANEAVHFTIKKLDEDSELVDLKLDMQTKSFSCNDEKIIVKIKTGELLVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: iTF_00726922;
80% Identity: -