Sinf036755.1
Basic Information
- Insect
- Sesamia inferens
- Gene Symbol
- -
- Assembly
- GCA_037179545.1
- Location
- CM073942.1:4328699-4330900[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-10 2.4e-07 32.0 0.0 3 38 17 52 15 59 0.89
Sequence Information
- Coding Sequence
- ATGGTTCGCaactataaaagaaaaacagatCGTGGCAAATGGAACGAACAAGATATGAGAAGAGCAGTAAATGCTGTTCTTACTGATAGAATGGGATATCTTCGAGCCTCGGCTACTTACGATGTTCCAAAGTCCACCTTAGAACGACGAGTAAGAAAAGTTCGTGAAACTGCTAATGCCGACACTGATTCTGATAACGACTGCGCGAAAAAACATTTGGGACGAttcaaaactgtttttacagcCGAGCAAGAAAATGAGTTGGCGGCGTATGTGAAATCTATGGAAGCACGGCTTTTTGGTTTAACAGGAAAAGAGCTTCGTATTATAGCTTATCAGTTGGCTCAGCGGAATCACATAGATAACCCATTTAATACAGAAACTGGTATGGCAGGAGAAGATTGGCTCAGCGGATTTCTAAAACGACACTCTGATCTAGCATACAGACGCCCAGAACCAACATCAGCTGCAAGAGCGATGGGTTTTAATAGAGTGGCAgtagacaatttttttaaattgttggaAAATGTTATAGATAAACATAAACTGTCGCCCGAAAGGATCTACAATGTAGACGAAACGGGGGTCAGTACTGTTCCAAAAAGTCAATCTAAGATATTGTCAATGAAGGGCCAGAAGCAAGTTGGCTGCCTCTCATCAGCAGAAAGAGGCCAGTTGGTTACTGCTGAAATTTGTTTTAATGCCGTTGGCACCTATGTCCCGCCTATGCTAATATACGCTCGGAAGCGGATGAAAGAAGAACTTTTAGATGATGCTCCGTCAGGGTTTTGGGGCACTTGCAGTGACAATGGCTGGATtacaacaaaattattttttgattggtTTAAATCATTCGTGCAGTTTGCACAACCAACGAAAGAGAAGCCTGTATTGCTTCTGTTAGACGGTCACTCTTCACATACCAAAAATATTGACCTAATAGATTATGCAAGAGAAAATaatgtgattttattatgtacaccaccaCACTGCACTCACAAAATGCAGCCTTTAGACGTGTCTTTCATGAAACCTTTAAGCACGTACTACAGTGCAGAAGTGAAAAAATGGCTGAGAGATCACCCTGGTCGCGTGGTTACACCGTATCAAGTGGCAAAACTTTTTGGACAAGCTTACTTAAAAGCAGCTACAATGCTCACAGCCATAAATGGTTTTCGGAAATGTGGTATATGGCCATtagataaaaatgtttttacggATGCTGATTTCATGGCTGCAGAGACGACTAACACAGAAAATCTCGCAAGAGAAGAGCTAAATGTGGAAAATGCTCCATCAACTCAAACATCCGAACCAGCAAGCACTGAAGAAAATCTATCGCGGCCATCCCCTTCAGCTCACCTTGGACAAATTTCGTCTACAACCCAGCAAAATAATATACCTTCTTCAGCTATTTGTCCTCAGGCTGAAAATGGTCGTGGTTTATCAGAAAATACAGAAAACAATATTTCTAATCCAAACTTACAAATTGATAAAGGCAGTGTTCCAGAGCCTCTGATATCCTCAGAAAATGCTGTCCATCCAGTTTTATccactgaaaaagaaaatattgttgaACCAGCCACATCTTTTTCTCCCGAGATTATTAATACTAGAAAGAAACCTGAACAAACATTGGCCGAGCAACCTTCGACGTCAACATTTCGAGCTAGAGACAAAACTCCCGAAAGGCAAATAAAAAGAGTATCTTCTTCTTTTCTGATAAGTCCTGAAAATATTATGGCTATACCTAAAGAAGTTAGGACTCAGGAGAGAAAGACTAGGAAACGAGGGAAGAGTGCAATACTAACTGAATCACCTTACAAAAACGAACTCATGAAAGATATAAGTATTAAAGAAGGTAAAAATAAGATAAAGAGTCAAGTGACTGAAAAaggtaaaaatcaaataaagaaaccTGGAAAAAAGACTGCAAAGAAGATTAAAAAGACAACTGACAAGGAAAATCTGCAGAAAAAGCGTCAAACCAAAAGGTGCAAAAAAGAAACTGAATCGGAAGATAGTTCATCCCAAGAAGTGGATGATGACTGTGCTTGCATCTATTGTGAGTACTTATACTCAGATTCAATCGAAGGTTGGGTCATGTGTAGCGTGTGCTACGGTTGGGCGCATAATTCGTGTGCTGGAGTAGATGAGGAAGACGAAGAAGCAAACATTTGTGAACGCTGTCGACCCGATTAA
- Protein Sequence
- MVRNYKRKTDRGKWNEQDMRRAVNAVLTDRMGYLRASATYDVPKSTLERRVRKVRETANADTDSDNDCAKKHLGRFKTVFTAEQENELAAYVKSMEARLFGLTGKELRIIAYQLAQRNHIDNPFNTETGMAGEDWLSGFLKRHSDLAYRRPEPTSAARAMGFNRVAVDNFFKLLENVIDKHKLSPERIYNVDETGVSTVPKSQSKILSMKGQKQVGCLSSAERGQLVTAEICFNAVGTYVPPMLIYARKRMKEELLDDAPSGFWGTCSDNGWITTKLFFDWFKSFVQFAQPTKEKPVLLLLDGHSSHTKNIDLIDYARENNVILLCTPPHCTHKMQPLDVSFMKPLSTYYSAEVKKWLRDHPGRVVTPYQVAKLFGQAYLKAATMLTAINGFRKCGIWPLDKNVFTDADFMAAETTNTENLAREELNVENAPSTQTSEPASTEENLSRPSPSAHLGQISSTTQQNNIPSSAICPQAENGRGLSENTENNISNPNLQIDKGSVPEPLISSENAVHPVLSTEKENIVEPATSFSPEIINTRKKPEQTLAEQPSTSTFRARDKTPERQIKRVSSSFLISPENIMAIPKEVRTQERKTRKRGKSAILTESPYKNELMKDISIKEGKNKIKSQVTEKGKNQIKKPGKKTAKKIKKTTDKENLQKKRQTKRCKKETESEDSSSQEVDDDCACIYCEYLYSDSIEGWVMCSVCYGWAHNSCAGVDEEDEEANICERCRPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338610; iTF_01338612; iTF_01338623; iTF_01338624; iTF_01085082; iTF_00751972; iTF_00751971; iTF_00751973; iTF_00751974; iTF_00751975; iTF_00007944; iTF_00720161; iTF_01090625; iTF_00720162; iTF_00720163; iTF_00720156; iTF_00178013; iTF_00720157; iTF_00720158; iTF_00720159; iTF_00720160; iTF_00736555; iTF_00007945; iTF_00832843; iTF_00832844; iTF_01359645;
- 90% Identity
- iTF_01338610; iTF_01338612; iTF_01338623; iTF_01338624;
- 80% Identity
- -