Basic Information

Insect: Sericinus montela
Gene Symbol: -
Assembly: GCA_029286605.1
Location: JAGSMR010000017.1:4526371-4541358[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0039 0.37 11.9 0.5 1 20 426 445 426 448 0.94

2 19 1.7e-05 0.0016 19.4 5.6 1 23 467 489 467 489 0.98

3 19 0.00015 0.014 16.4 4.7 1 23 495 517 495 517 0.99

4 19 3e-05 0.0028 18.6 5.3 1 23 523 545 523 545 0.97

5 19 9.1e-06 0.00086 20.2 7.3 1 23 551 573 551 573 0.97

6 19 7.7e-07 7.3e-05 23.6 2.7 1 23 579 601 579 601 0.97

7 19 8.1e-05 0.0077 17.2 6.7 1 23 607 629 607 629 0.97

8 19 0.00011 0.011 16.8 6.7 1 23 635 657 635 657 0.97

9 19 3.9e-07 3.7e-05 24.5 1.9 1 23 663 685 663 685 0.98

10 19 4e-05 0.0038 18.2 7.9 1 23 691 713 691 713 0.98

11 19 6.3e-06 0.0006 20.7 6.6 1 23 719 741 719 741 0.98

12 19 3.6e-06 0.00034 21.5 5.2 1 23 747 769 747 769 0.98

13 19 1.1e-05 0.0011 19.9 5.3 1 23 775 797 775 797 0.96

14 19 2.3e-05 0.0022 18.9 6.3 1 23 803 825 803 825 0.97

15 19 9.7e-06 0.00092 20.1 5.8 1 23 831 853 831 853 0.98

16 19 1.2e-05 0.0011 19.9 7.3 1 23 859 881 859 881 0.97

17 19 5.2e-06 0.00049 21.0 3.1 1 23 887 909 887 909 0.96

18 19 0.00043 0.041 14.9 0.3 1 23 916 938 916 938 0.96

19 19 0.0034 0.32 12.1 4.5 1 23 947 969 947 969 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0039	0.37	11.9	0.5	1	20	426	445	426	448	0.94
2	19	1.7e-05	0.0016	19.4	5.6	1	23	467	489	467	489	0.98
3	19	0.00015	0.014	16.4	4.7	1	23	495	517	495	517	0.99
4	19	3e-05	0.0028	18.6	5.3	1	23	523	545	523	545	0.97
5	19	9.1e-06	0.00086	20.2	7.3	1	23	551	573	551	573	0.97
6	19	7.7e-07	7.3e-05	23.6	2.7	1	23	579	601	579	601	0.97
7	19	8.1e-05	0.0077	17.2	6.7	1	23	607	629	607	629	0.97
8	19	0.00011	0.011	16.8	6.7	1	23	635	657	635	657	0.97
9	19	3.9e-07	3.7e-05	24.5	1.9	1	23	663	685	663	685	0.98
10	19	4e-05	0.0038	18.2	7.9	1	23	691	713	691	713	0.98
11	19	6.3e-06	0.0006	20.7	6.6	1	23	719	741	719	741	0.98
12	19	3.6e-06	0.00034	21.5	5.2	1	23	747	769	747	769	0.98
13	19	1.1e-05	0.0011	19.9	5.3	1	23	775	797	775	797	0.96
14	19	2.3e-05	0.0022	18.9	6.3	1	23	803	825	803	825	0.97
15	19	9.7e-06	0.00092	20.1	5.8	1	23	831	853	831	853	0.98
16	19	1.2e-05	0.0011	19.9	7.3	1	23	859	881	859	881	0.97
17	19	5.2e-06	0.00049	21.0	3.1	1	23	887	909	887	909	0.96
18	19	0.00043	0.041	14.9	0.3	1	23	916	938	916	938	0.96
19	19	0.0034	0.32	12.1	4.5	1	23	947	969	947	969	0.99

Sequence Information

Coding Sequence: ATGAATCCTGAACATCACACTCTCAATACGGGTGGTGGCCAGCCGCCTGGTACATCAGAGTCACAGAATCAAAGAGTTCCGTCTGCTCAGCAACAACAGCAACCATCCAATAATCTGACTCCAACAACCTCCGCAACCGACCTACGAGTTAATTCTGCGGCGGTAAATGTTGCTTTATCAAGCGTCGCGAAGTATTGGGTATTTACAAATCTATTTCCTGGTCCAATACCTCAAGTCTCTGTTTATGGGCTTCCTACCAATACAAGAATAGAAAATGGAAAACCTGTccaggacCTTGGTCAGGCCCATGCAAGCCTCCTGAATGGTGATCCTAACATTATACTTGGTCAACATACTGGGCAACCTCAAATATCTGTGTCAGGTCCAAGTGGTCAGCAAATACCTGTGACACAAATTATTGCAACACAACTACAATCAGGTCAAACTCatgaaTCATTGGTGGGTCATAATCAACAACAGGAACTTGCTTCCCAGCAAGGTTCTGGCAATGGATCACAGGTGTCAGTTAGCACAGGCCAGCCCTCTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTATACAACATCATAACATTGATATGGTAAATCCTATGGGACATCATTCTCAACAACATTCAATGCAACAACAGCTTATGGCAACCACTCGTCAAGAACATGCTAACCAACagatTCAGCTAACAGTGAGTGAAGATGGCATTGTGACAGTTGTGGAGCCTGGAGGCAAACTTGTAGACAAAGAAGAACTTCATGAAGCCATCAAAATGCCTTCTGAGCACACCTTGACAGTGCATCAATTACAACAGATAGTTGGACATCATCAGGTAATTGACAGTGTTGTTCGGATTGAACAAGCAACAGGAGAGCCAGCAAACATACTTGTAACACAGAATCCTGATGGCACCACATCAATTGAAACAAGTGCTGCAGAACAACTTATAGTAAAAGATGAGAAAAATGTTGCAAAAATTGAATCAGCCCAATTTGCAATACCTACTGATATAAAGGATATTAAGGGCATAGACTTAAAGAGTGTAGGAGCAATGGGTATGGAAGGGGCTGTAGTGAAAATTTCAGCAGGTGCCTCTGAACATGACCTTCATGCtatgtataaagttaatgtGGAAGACCTTTCACAACTGTTGGCATACCATGAAGTGTTTGGGAAACTTAATTCTGAGAATCAACAGCAGGCCAAGGTAATAAGTGAAGTGGAACTTATTGTACACAGgCGATATCATGGTGAAAGCAAGCCATATACATGTCAAGTGTGTGGCTCTGCATTTGCAAATGCGGTTGAACTGTCTAGACATGGGAAATGTCACCTagCTGGCGACCCTGCAGAGAGACAAGCTAAAAGATTGACTCAAGATAAACCCTATGCATGCACAACTTGCCACAAAACATTTTCTCGTAAGGAGCATTTAGACAATCATGTCAGAAGCCACACGGGTGAAACTCCTTATAGGTGTCAATTCTGTGCTAAGACATTCACACGTAAGGAGCATATGGTGAACCATGTTAGAAAGCATACTGGTGAGACTCCTCATCGTTGTGATATCTGCAAGAAGAGTTTTACTAGAAAAGAACATTTTATGAACCATGTCATGTGGCACACAGGTGAAACGCCGCATCATTGTCAAATATGTGGCAAGAAGTATACTAGGAAGGAGCATTTAGTCAACCATATGAGATCTCATACAAATGATACTCCGTTCCGATGCGAATTATGCGGCAAGTCATTCACAAGAAAGGAACACTACACCAATCACATACTATGGCATACGGGAGAAACACCCCATCGCTGTGATTTTTGTTCAAAAACATTTACTCGCAAGGAGCACTTGTTAAACCACGTCCGGCAGCACACCGGCGAGTCGCCGCACCGTTGCACCTTCTGTTCCAAGTCCTTCACAAGGAGAGAACACCTCGTCAACCACGTGAGGCAGCACACCGGCGAGACGCCCTTTCAGTGTGGATACTGCCCTAAAGCCTTCACCAGAAAGGATCATttagTGAACCATGTGCGCCAACACACTGGAGAATCTCCGCATAAATGTTCATTCTGTACAAAGTCGTTCACACGTAAGGAACACCTGACGAACCATGTCCGGCAGCACACGGGCGAGTCGCCGCACCGTTGCACTTATTGCGCCAAGTCCTTCACAAGGAAGGAGCATCTAACTAACCATATCAGACAGCATACGGGCGAAACTCCACACAAGTGCACGTACTGCCCGCGCGCCTTCTCGCGCAAGGAGCACCTCAACAACCACGTGCGGCAGCACACCGGCGACACGCCGCACGCCTGCTCCTACTGCAACAAGACCTTCACGCGCAAGGAACACCTCGTCACCCACGTCCGGCAACACACTGGCGAGACTCCATTCAAATGCACATATTGTACAAAGGCGTTCTCGCGGAAGGAACATCTAACGAATCATGTACACCTTCACACCGGAGAGACTCCTCACAAGTGTCCCTTCTGCACCAAAACATATTCCAGGAAGGAACATTTGACCAACCATGTCAGGATACACACTGGTGAATCGCCGCACCGCTGTGACTTCTGCGACAAGACTTTTACAAGGAAAGAGCACCTGACGAACCATTTGAAACAACACACTGGAGATACTCCTCATGCCTGTAAAGTCTGCTCCAAACCTTTTACGAGAAAAGAACACCTAGTGACCCACATGagAGCGCACAGTTGTGGTGAACGACCTTACAGTTGTGGCGAATGCGGAAAATCATTCCCATTGAAAGGCAACTTATTATTCCATGAACGATCACATCAAAAGGGAGGGGGAAATAGACCATTCAGATGTGAAGTTTGTTCAAAGGACTTTATTTGTAAAGGGCATTTAGTATCACATCAGCGAACACATGCAACAACAGGCGAGACCGTAGCGAGCAATGAACAAATAGCGGAAACGGAACAAtgtggcgattgtgacaaagAATCTACAGAGCAGCTTGAACGAAAACATGACATTAGATCAACAAATGAAAATAGGCCGACAGAAGAAGATGTTACACAAAATCAACAAAGCAACACTGTTATGCAAATTACTAGCCAGGTGAGTGTCAGTGTGTGA
Protein Sequence: MNPEHHTLNTGGGQPPGTSESQNQRVPSAQQQQQPSNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTNTRIENGKPVQDLGQAHASLLNGDPNIILGQHTGQPQISVSGPSGQQIPVTQIIATQLQSGQTHESLVGHNQQQELASQQGSGNGSQVSVSTGQPSHQQVPNNRVEFIQHHNIDMVNPMGHHSQQHSMQQQLMATTRQEHANQQIQLTVSEDGIVTVVEPGGKLVDKEELHEAIKMPSEHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAAEQLIVKDEKNVAKIESAQFAIPTDIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSENQQQAKVISEVELIVHRRYHGESKPYTCQVCGSAFANAVELSRHGKCHLAGDPAERQAKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGDTPHACSYCNKTFTRKEHLVTHVRQHTGETPFKCTYCTKAFSRKEHLTNHVHLHTGETPHKCPFCTKTYSRKEHLTNHVRIHTGESPHRCDFCDKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLVTHMRAHSCGERPYSCGECGKSFPLKGNLLFHERSHQKGGGNRPFRCEVCSKDFICKGHLVSHQRTHATTGETVASNEQIAETEQCGDCDKESTEQLERKHDIRSTNENRPTEEDVTQNQQSNTVMQITSQVSVSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157022;
90% Identity: iTF_00204511;
80% Identity: iTF_01337887;