Basic Information

Insect: Sericinus montela
Gene Symbol: -
Assembly: GCA_029286605.1
Location: JAGSMR010000017.1:4526371-4541358[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.9 8.9e+03 -2.6 0.0 18 28 427 437 423 444 0.78

2 16 0.019 43 4.8 1.5 16 30 466 481 457 490 0.74

3 16 0.0048 11 6.7 2.3 6 38 485 517 481 519 0.75

4 16 0.02 46 4.7 2.8 5 33 512 536 510 549 0.81

5 16 0.0021 4.7 7.9 6.0 18 38 552 573 537 576 0.87

6 16 0.013 28 5.4 1.3 15 33 577 596 573 602 0.79

7 16 6.9 1.6e+04 -3.4 10.9 18 36 608 627 593 658 0.58

8 16 0.00081 1.9 9.2 0.5 5 38 652 685 650 686 0.83

9 16 0.055 1.2e+02 3.3 5.2 13 38 687 713 680 714 0.79

10 16 0.019 44 4.8 5.3 17 38 719 741 709 742 0.83

11 16 0.037 84 3.9 0.7 17 30 747 761 742 770 0.73

12 16 0.0029 6.5 7.4 3.8 8 38 767 797 764 798 0.78

13 16 0.0032 7.4 7.3 3.1 7 33 794 820 791 825 0.77

14 16 0.0041 9.2 7.0 3.3 6 33 821 848 820 854 0.77

15 16 0.00027 0.62 10.7 3.2 6 38 849 881 848 882 0.85

16 16 0.014 31 5.3 0.3 19 38 889 909 883 909 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.9	8.9e+03	-2.6	0.0	18	28	427	437	423	444	0.78
2	16	0.019	43	4.8	1.5	16	30	466	481	457	490	0.74
3	16	0.0048	11	6.7	2.3	6	38	485	517	481	519	0.75
4	16	0.02	46	4.7	2.8	5	33	512	536	510	549	0.81
5	16	0.0021	4.7	7.9	6.0	18	38	552	573	537	576	0.87
6	16	0.013	28	5.4	1.3	15	33	577	596	573	602	0.79
7	16	6.9	1.6e+04	-3.4	10.9	18	36	608	627	593	658	0.58
8	16	0.00081	1.9	9.2	0.5	5	38	652	685	650	686	0.83
9	16	0.055	1.2e+02	3.3	5.2	13	38	687	713	680	714	0.79
10	16	0.019	44	4.8	5.3	17	38	719	741	709	742	0.83
11	16	0.037	84	3.9	0.7	17	30	747	761	742	770	0.73
12	16	0.0029	6.5	7.4	3.8	8	38	767	797	764	798	0.78
13	16	0.0032	7.4	7.3	3.1	7	33	794	820	791	825	0.77
14	16	0.0041	9.2	7.0	3.3	6	33	821	848	820	854	0.77
15	16	0.00027	0.62	10.7	3.2	6	38	849	881	848	882	0.85
16	16	0.014	31	5.3	0.3	19	38	889	909	883	909	0.93

Sequence Information

Coding Sequence: ATGAATCCTGAACATCACACTCTCAATACGGGTGGTGGCCAGCCGCCTGGTACATCAGAGTCACAGAATCAAAGAGTTCCGTCTGCTCAGCAACAACAGCAACCATCCAATAATCTGACTCCAACAACCTCCGCAACCGACCTACGAGTTAATTCTGCGGCGGTAAATGTTGCTTTATCAAGCGTCGCGAAGTATTGGGTATTTACAAATCTATTTCCTGGTCCAATACCTCAAGTCTCTGTTTATGGGCTTCCTACCAATACAAGAATAGAAAATGGAAAACCTGTccaggacCTTGGTCAGGCCCATGCAAGCCTCCTGAATGGTGATCCTAACATTATACTTGGTCAACATACTGGGCAACCTCAAATATCTGTGTCAGGTCCAAGTGGTCAGCAAATACCTGTGACACAAATTATTGCAACACAACTACAATCAGGTCAAACTCatgaaTCATTGGTGGGTCATAATCAACAACAGGAACTTGCTTCCCAGCAAGGTTCTGGCAATGGATCACAGGTGTCAGTTAGCACAGGCCAGCCCTCTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTATACAACATCATAACATTGATATGGTAAATCCTATGGGACATCATTCTCAACAACATTCAATGCAACAACAGCTTATGGCAACCACTCGTCAAGAACATGCTAACCAACagatTCAGCTAACAGTGAGTGAAGATGGCATTGTGACAGTTGTGGAGCCTGGAGGCAAACTTGTAGACAAAGAAGAACTTCATGAAGCCATCAAAATGCCTTCTGAGCACACCTTGACAGTGCATCAATTACAACAGATAGTTGGACATCATCAGGTAATTGACAGTGTTGTTCGGATTGAACAAGCAACAGGAGAGCCAGCAAACATACTTGTAACACAGAATCCTGATGGCACCACATCAATTGAAACAAGTGCTGCAGAACAACTTATAGTAAAAGATGAGAAAAATGTTGCAAAAATTGAATCAGCCCAATTTGCAATACCTACTGATATAAAGGATATTAAGGGCATAGACTTAAAGAGTGTAGGAGCAATGGGTATGGAAGGGGCTGTAGTGAAAATTTCAGCAGGTGCCTCTGAACATGACCTTCATGCtatgtataaagttaatgtGGAAGACCTTTCACAACTGTTGGCATACCATGAAGTGTTTGGGAAACTTAATTCTGAGAATCAACAGCAGGCCAAGGTAATAAGTGAAGTGGAACTTATTGTACACAGgCGATATCATGGTGAAAGCAAGCCATATACATGTCAAGTGTGTGGCTCTGCATTTGCAAATGCGGTTGAACTGTCTAGACATGGGAAATGTCACCTagCTGGCGACCCTGCAGAGAGACAAGCTAAAAGATTGACTCAAGATAAACCCTATGCATGCACAACTTGCCACAAAACATTTTCTCGTAAGGAGCATTTAGACAATCATGTCAGAAGCCACACGGGTGAAACTCCTTATAGGTGTCAATTCTGTGCTAAGACATTCACACGTAAGGAGCATATGGTGAACCATGTTAGAAAGCATACTGGTGAGACTCCTCATCGTTGTGATATCTGCAAGAAGAGTTTTACTAGAAAAGAACATTTTATGAACCATGTCATGTGGCACACAGGTGAAACGCCGCATCATTGTCAAATATGTGGCAAGAAGTATACTAGGAAGGAGCATTTAGTCAACCATATGAGATCTCATACAAATGATACTCCGTTCCGATGCGAATTATGCGGCAAGTCATTCACAAGAAAGGAACACTACACCAATCACATACTATGGCATACGGGAGAAACACCCCATCGCTGTGATTTTTGTTCAAAAACATTTACTCGCAAGGAGCACTTGTTAAACCACGTCCGGCAGCACACCGGCGAGTCGCCGCACCGTTGCACCTTCTGTTCCAAGTCCTTCACAAGGAGAGAACACCTCGTCAACCACGTGAGGCAGCACACCGGCGAGACGCCCTTTCAGTGTGGATACTGCCCTAAAGCCTTCACCAGAAAGGATCATttagTGAACCATGTGCGCCAACACACTGGAGAATCTCCGCATAAATGTTCATTCTGTACAAAGTCGTTCACACGTAAGGAACACCTGACGAACCATGTCCGGCAGCACACGGGCGAGTCGCCGCACCGTTGCACTTATTGCGCCAAGTCCTTCACAAGGAAGGAGCATCTAACTAACCATATCAGACAGCATACGGGCGAAACTCCACACAAGTGCACGTACTGCCCGCGCGCCTTCTCGCGCAAGGAGCACCTCAACAACCACGTGCGGCAGCACACCGGCGACACGCCGCACGCCTGCTCCTACTGCAACAAGACCTTCACGCGCAAGGAACACCTCGTCACCCACGTCCGGCAACACACTGGCGAGACTCCATTCAAATGCACATATTGTACAAAGGCGTTCTCGCGGAAGGAACATCTAACGAATCATGTACACCTTCACACCGGAGAGACTCCTCACAAGTGTCCCTTCTGCACCAAAACATATTCCAGGAAGGAACATTTGACCAACCATGTCAGGATACACACTGGTGAATCGCCGCACCGCTGTGACTTCTGCGACAAGACTTTTACAAGGAAAGAGCACCTGACGAACCATTTGAAACAACACACTGGAGATACTCCTCATGCCTGTAAAGTCTGCTCCAAACCTTTTACGAGAAAAGAACACCTAGTGACCCACATGagAGCGCACAGTTGTGGTGAACGACCTTACAGTTGTGGCGAATGCGGAAAATCATTCCCATTGAAAGGCAACTTATTATTCCATGAACGATCACATCAAAAGGGAGGGGGAAATAGACCATTCAGATGTGAAGTTTGTTCAAAGGACTTTATTTGTAAAGGGCATTTAGTATCACATCAGCGAACACATGCAACAACAGGCGAGACCGTAGCGAGCAATGAACAAATAGCGGAAACGGAACAAtgtggcgattgtgacaaagAATCTACAGAGCAGCTTGAACGAAAACATGACATTAGATCAACAAATGAAAATAGGCCGACAGAAGAAGATGTTACACAAAATCAACAAAGCAACACTGTTATGCAAATTACTAGCCAGGTGAGTGTCAGTGTGTGA
Protein Sequence: MNPEHHTLNTGGGQPPGTSESQNQRVPSAQQQQQPSNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTNTRIENGKPVQDLGQAHASLLNGDPNIILGQHTGQPQISVSGPSGQQIPVTQIIATQLQSGQTHESLVGHNQQQELASQQGSGNGSQVSVSTGQPSHQQVPNNRVEFIQHHNIDMVNPMGHHSQQHSMQQQLMATTRQEHANQQIQLTVSEDGIVTVVEPGGKLVDKEELHEAIKMPSEHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAAEQLIVKDEKNVAKIESAQFAIPTDIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSENQQQAKVISEVELIVHRRYHGESKPYTCQVCGSAFANAVELSRHGKCHLAGDPAERQAKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGDTPHACSYCNKTFTRKEHLVTHVRQHTGETPFKCTYCTKAFSRKEHLTNHVHLHTGETPHKCPFCTKTYSRKEHLTNHVRIHTGESPHRCDFCDKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLVTHMRAHSCGERPYSCGECGKSFPLKGNLLFHERSHQKGGGNRPFRCEVCSKDFICKGHLVSHQRTHATTGETVASNEQIAETEQCGDCDKESTEQLERKHDIRSTNENRPTEEDVTQNQQSNTVMQITSQVSVSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157022;
90% Identity: iTF_00204511;
80% Identity: iTF_01337889;