Smon018290.1
Basic Information
- Insect
- Sericinus montela
- Gene Symbol
- bab1
- Assembly
- GCA_029286605.1
- Location
- JAGSMR010000082.1:1492106-1499194[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-18 1.4e-14 54.1 0.0 1 43 28 71 28 73 0.95 2 2 1.5 4.1e+03 -1.8 1.6 6 15 163 172 159 174 0.83
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAATCAGAGCCTGGTGCACAATCTGCGGTTCCGCGAGCGCGGCCCGCTGAAATCCTGGAGACCGGAGACCATGGCCGAAGCCATCTTCTCTGTGCTGAAGGAGGGTCTCTCGCTGTCCCAGGCCGCACGCAAATATGACATCCCGTATCCGACGTTCGTGCTATACGCCAATCGAGTCCACAACATGCTCGGCCCTAGCGCCGATGGGGGGGCagATCTGAGGCCGAAAGGACGCGGGCGTCCGCAACGGATCCTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTGATCCGCGCCGTCGTCTTCCGAGATTCGCACGCGTCACACGCCGCTCACCACATCAAGGAGGAGGTCCTCCCTTACCCCTCCATTACGGACGGGATGGGCGTTCAGAACGCATACGGGGGCGTGGCGTGCGGCAACGGGCGCGAGGGCGGCGTGTCGCCGaacgctgccgccgccgccgccgtggCCGCCGTCGCGCACGGCCTGCGCCGCCAGATGTGCAACATGGTGGTGGCGGCGCAGCGGCCGCCCGACCACCCGCCGCACCTCGGgctgccgccgctgccgctGCAGTCGCCGCGCCTGCCCTCCCCCCTGTCCTCTGGGCTGGAGTCCCCGCTctgctcgccgccgccgccgggCCACGCGCTGGAGCCGCCGCGGCCGGCTGACCCGTTCCGCCCGTTCGCCTCCCCGCGCCCGGACAGCCGCTACAGTGAGCGCGACTCGATCGCCGACATCACAGAGATGGGTCCGCCGAAGACCCCCGTGGGCGTCGCGAAGAACGGCAAGGACCTCGGCACGCCGCTGCCGGTGAAGATGGAGCCGCCTCCTGCAGAGGCGCGCGCTGAGAACATCTGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHASHAAHHIKEEVLPYPSITDGMGVQNAYGGVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSSGLESPLCSPPPPGHALEPPRPADPFRPFASPRPDSRYSERDSIADITEMGPPKTPVGVAKNGKDLGTPLPVKMEPPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079819;
- 90% Identity
- iTF_00922809;
- 80% Identity
- -