Scos034654.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- SNAPC4_1
- Assembly
- GCA_949820665.1
- Location
- OX463317.1:10345687-10348056[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.7 2.9e+03 -0.3 0.0 22 35 227 241 224 249 0.81 2 5 6.3e-08 0.00011 23.5 0.4 1 45 258 304 258 305 0.93 3 5 1.4e-09 2.4e-06 28.8 0.2 2 45 312 359 311 360 0.93 4 5 6.8e-13 1.2e-09 39.4 0.0 1 43 364 406 364 408 0.97 5 5 1e-05 0.018 16.4 0.0 3 46 417 464 415 464 0.93
Sequence Information
- Coding Sequence
- atgtcagattctGAGTCTGAATATGATGACAACAGCTCCACTGATGAAGAAGCGGAACAGGAAGAGCTTAGAAAGCTCACAGCTGCTTTGGAACAGGACAATATCCAGAACCAAGTATCCACTTATCATGCTGCAAGTACTTCTTCAACAAATGCTGAATATGCTAAAGTTACAGCTGCTATAGAGCTAAATAAAAAGATAGAGGAGAAAATAATTCAACTTGAAAAAGTTCTATATAATCGTTTACGAGAGTGCCGAAAACGGCTCGCtgatataaaagaaaaatctgCGAATACAAGACCTGAGAAAAATCAACAGATATTTAGATATGTCTTCTGCGGAAAGCCGTATTTCAGAGACAGGGACAATTTTCTACCACCGGACAACGACGATACCATCACAATGCGAAGAGCAGGAATGTATGACTATTCAAACATTGCATGTTTAGCTGGCTGGACAGTTAAGGACAAACAAGACCTCCtcacacaaatcctgaaacatTCTCGGAAACTCAAAAAAGAAGAACTTGAATCAAAACTTAATTTGTTAATCAGACAATCTAAAACGCAGGACTGTAAAAGTTTACAGCAAGATATCATTGCACTTAAAAATCAAATAGGTTCTATTAATAAAACTGCACTAAGTGAGAATCTAGTGCTACCAGTGGATGAAGAATACGACTGGGAGGCAATAGCTAATTCACTGAGTTATAGACATACACCACAAGAATATCGGGCTCTATGGAAACTATTTTTACATCCAAAAATAAACAAGAAGTCTTGGGAAAAAGGAGAACATTCAAGATTACACCTAATTGcaatgaaaaacaaattacaagATTGGGATAAAATTGCCAAGGAACTAAATACTGGACGCACCGGTTACCAATGTTTTGTATACTATCGTACTAATATGGGGAATAACACAATGGGCCAAAAATGGACACCGGAAGAGGAAGAGTACCTAAAAAGGTACATTGATTACTATAGGGAAGATAATTACATACCATGGGGTAAAGTAGCTTCTTCAATGGAAAACAGAACcaaaattcaaatatataaCAAATATGCCAGGCTTTTGGCAAATAGAAAAGGTAGATTCCTTCCTGAAGAAGATGCTGTGCTTCTAACAGGTGTTCAGAAATATGGCACAAACTTTAAACAAATTGCAAAATATGTCTCTGGACGTTCCGGAGCTCAGTTACGCGCTCGGTATAATGTGCTGAATGCATCCACAAGTACATCAGTAGTGTGGACATTTGAAGAAGACAAGAAACTGATTCAACTCATGGCAAACCAGGATTCGTCTCTGTACATCAATTATGCTAATCTGACACCTCACTTTCCGAATAAAGACAGAAATCAATTACGAGCTAGATACGTAACTTTGCTGAAATGGATGAAGAAGCATCCAACTAGGGACATATCTAGAGCACCGAGAAGAGGAGCACGACGTCTGGTGCACGGCATAGGAGAAGGTGACATGGAACTGGCAGTTGctaaattaaagaaaagaatGTTAActgaagtcaaaataaaaaaaactaagaagATTACAAGAAATTCACCTGAAGATGTGATTGAACATGGCATTATTGCAGCACTGATTACTGAATCAGTAAAGGCAGAAGACACAGCTGACTGTATGCCTGAGAATGAACTCACAGATAAAGACATGCAACTGCCTTTGAACGAACCTACAAATGAAACAAACCTCcggaaattattaatattacttaaagcaaaattaaataaacagacttTCGAGACGAGTTTATATGCTGTAAAGTATCCAAGATTGAAACATGTAGAAGCCGAATCATTTACAGTAAAAGTGAAATCATATTCAAGGAAATCGGCCACAGATGTTATAACAGTTGGAGGACAACTTCATCCACCAGACATTTGGGGCAACCATAAATTGACAACAAATGAATATGTGCTTCCGCCAAACTATTCAACAATTACTGGTTGCCGGAGGCTGATGGCATTTGCTAGCCCGAAAACACACAATAGCCATCGGTCATCAAGTTTACACCAATACACACACAGGAATATATTATTAAAGGAGCAAGTTCATCTTTTTATGGAGAGATTCAATACACTATTCTTGTGGCCTATGTTATTGTCAAACGATCCACCAAAAGAAGAGGATGACCGCCAACCTATTAAGATGCATGTTGACAAATATGTAAGACGGAGAGAACATTTACAAATGCCTTCCTGCATGAGTGTGATAATACCGGATAAAGTGAACAATCTTGTCAATGAGAATATTGATTTGCCAACTACAAGTACTAATACCACTGTGAAACTTAAAGTTGGTAATGATGATTTTATGTACatagatgatgatgaagatgatgattag
- Protein Sequence
- MSDSESEYDDNSSTDEEAEQEELRKLTAALEQDNIQNQVSTYHAASTSSTNAEYAKVTAAIELNKKIEEKIIQLEKVLYNRLRECRKRLADIKEKSANTRPEKNQQIFRYVFCGKPYFRDRDNFLPPDNDDTITMRRAGMYDYSNIACLAGWTVKDKQDLLTQILKHSRKLKKEELESKLNLLIRQSKTQDCKSLQQDIIALKNQIGSINKTALSENLVLPVDEEYDWEAIANSLSYRHTPQEYRALWKLFLHPKINKKSWEKGEHSRLHLIAMKNKLQDWDKIAKELNTGRTGYQCFVYYRTNMGNNTMGQKWTPEEEEYLKRYIDYYREDNYIPWGKVASSMENRTKIQIYNKYARLLANRKGRFLPEEDAVLLTGVQKYGTNFKQIAKYVSGRSGAQLRARYNVLNASTSTSVVWTFEEDKKLIQLMANQDSSLYINYANLTPHFPNKDRNQLRARYVTLLKWMKKHPTRDISRAPRRGARRLVHGIGEGDMELAVAKLKKRMLTEVKIKKTKKITRNSPEDVIEHGIIAALITESVKAEDTADCMPENELTDKDMQLPLNEPTNETNLRKLLILLKAKLNKQTFETSLYAVKYPRLKHVEAESFTVKVKSYSRKSATDVITVGGQLHPPDIWGNHKLTTNEYVLPPNYSTITGCRRLMAFASPKTHNSHRSSSLHQYTHRNILLKEQVHLFMERFNTLFLWPMLLSNDPPKEEDDRQPIKMHVDKYVRRREHLQMPSCMSVIIPDKVNNLVNENIDLPTTSTNTTVKLKVGNDDFMYIDDDEDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01336789; iTF_01336788;
- 90% Identity
- -
- 80% Identity
- -