Scos033371.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- SNAPC4
- Assembly
- GCA_949820665.1
- Location
- OX463316.1:4946345-4948735[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.3 2.2e+03 0.1 0.0 22 33 227 238 224 240 0.89 2 5 1.3e-08 2.3e-05 25.7 0.3 1 38 258 297 258 304 0.96 3 5 4.3e-08 7.2e-05 24.1 0.1 2 43 312 357 311 360 0.93 4 5 9.3e-13 1.6e-09 39.0 0.0 1 43 364 406 364 408 0.97 5 5 2.2e-05 0.037 15.4 0.0 3 46 417 462 415 462 0.94
Sequence Information
- Coding Sequence
- ATGTCAGATTCTGAATCTGAATATGATGACAGCAGTTCCACTGATGAAGAAGCTAAGCAAGAAGAGCTTAGAAAGCTCGCGGCCGCTTTAGAACAAGAAAATATCCAGAACCAAATATCCACTTATCAAGCCGCAAGTAGTTCTTCAACAAATGCTGAATATACTAAAGTCATAGCTGCTATagagttaaataaaaagacagagGAGAAATTAATTCAACTAGAAAAAGTTCTATATAATCGTTTACGAGAGTGCCGAAAACGGCTcgctgatataaaaaaaaaaactgtgaataCAAGACCTGAAAAAAATCAACAGATATTCAGATATGTCTCCTGTGGAAAGCCCTATTTCAGAGACAGGGACAATTTTCCAGCACCGGACAACAACGATACCATCACAATGCGAACAGTAGGAATGTATGACTATTCAAACATAACATGTTGCGTGGGTTGGACAGTTAAGGACAAACAAGACCTCCgcacacaaatcctgaaacatTCTCGAAAACTCCACAGAGAAGCACTTGAATCAAAACTTAATTTTTTAATCAGACAAACTAAAATGCAGGACAGTAAAAGTTTACAGCAAGATATCATTGCACTTAAAACACAAATTGGTTCTATTAATAAAACTACACTAAGTGAGAATCTAGTGTTACCTATGGATGAAGAATACGACTGGGAGGCAATAGCTAATTCACTGAGTAATAGACATAAACCAGAAGAATATCGGGCTCTATGGAAACTATTTTTACATCCTTCAATAAATAAGAAACCTTGGGATAAAGGAGAACATTCGAGATTACACCaaattgcaaagaaaaacaaattacaagATTGGGATAAAATTGCAAAGGAACTAAATACTGGACGCACCGGTTACCAATGTTTTGTATACCATCGTACTAATATGGGGAATGACACAATGGGTCAAAAATGGACACCGGAAGAGGAAGTGTACCTAAAAAGGCACATTGATTACTATAAGGAAGACAATTACATACCATGGGGTAAGGTAGCTGCTTCAATGgaaaacagaactaaaattcaaatatataaCAAATATGCCAGGCTTCAAGAAAATAGAAAAGGTAGATTCCTTCCTGAAGAAGATGCTGTGCTCCTAACAGGTGTTCAGAAATATGGAACAAAGTTTAAACAGATTGCAAAATATATGTCTGGACGGTCCGTAGCTCAGTTACGCACTCGGTATAATGTGCTGAATGCATCCACAAGAACATCTGTAGTGTGGACATTTGAACAAGACAAGAAACTGATTCAACTCATGGCGAATCAGGATTCGTACATCAATTTTGCAAATCTGACACCTCACTTTCCAGATAAAGACAGAAATCAATTACGATCTAGATACGTAACTTTGCTGAAATGGATGAAGAAACATCCAACTAGGGACTTATCTAGAGCACCGAGGAGAGGAGCACGACGTCTGCTGCACGGTAGAGGAGAGGGTGACATGGACCTGGCAATTGctaaattaaagaaaagaatGTTAAATGATGTAAACATAAAAAGAACCAAAAAGGTTACAAAAAATTCACCTGAAGATATAATTGAACATGCCATTATTGCAGCACTAATCACTGAATCAGTAAAGGCAGAAGACACAGCTAACTCTATCCCTGAAATGGAACTCTCAGATAAAGACATGCAACTGCCTTTGAATGAACCTACAAATGAAACAAACCTCcggaaattattaatattgctTAAAGCAAAACTAAATAAACAGACTTTCGAGAAGAGTTTATATGCTGTAAAGTATCCAAGATTGAAACAAGTAGAAGCCGAATCATTTACAGTAAAAATGAAATCATATTCAAGGAGAGCAGCCACAAATGTTATAACAGTTGGAGGACAAATTCATCCACCAGACATTTGGGGTGGCCATAAATTGACAACAAATGAATATGTGCTTCCTCCAAACTATGCCACAATCACTGGCTGTCGGAGGCTGATGGCATTTGCTAGCACGAAAATCCACAATAGTCAACGGTCATCAAGTTTTTACACACAAAGGAAATTATTAGTAAAGGAGGAAGTTAATCTTTTTATGGAGAGATTCAATACACTGTTCTTGTGGCCTACGTTATTGTCAAACGAACCACCAAAAGAACAGGATGACCACCAACCTATTAAGATGCATATTGACAAATATGTAAGACGGAGAGAATGTTTGCAATTACCATCCTGCATGAGTGTGATAATACCGGATAAAGTTAACAATCTTGTCAATGACCAAATTGATTTGCCAACTACGAGTACAGATACCACTGTGAAATCTAAAGTTGGtaatattgattttatgtaCATAGATGGCGATGATGAACAAGAAGATCTATCAGAATTTGAAGCTGCAATATATTCCTAG
- Protein Sequence
- MSDSESEYDDSSSTDEEAKQEELRKLAAALEQENIQNQISTYQAASSSSTNAEYTKVIAAIELNKKTEEKLIQLEKVLYNRLRECRKRLADIKKKTVNTRPEKNQQIFRYVSCGKPYFRDRDNFPAPDNNDTITMRTVGMYDYSNITCCVGWTVKDKQDLRTQILKHSRKLHREALESKLNFLIRQTKMQDSKSLQQDIIALKTQIGSINKTTLSENLVLPMDEEYDWEAIANSLSNRHKPEEYRALWKLFLHPSINKKPWDKGEHSRLHQIAKKNKLQDWDKIAKELNTGRTGYQCFVYHRTNMGNDTMGQKWTPEEEVYLKRHIDYYKEDNYIPWGKVAASMENRTKIQIYNKYARLQENRKGRFLPEEDAVLLTGVQKYGTKFKQIAKYMSGRSVAQLRTRYNVLNASTRTSVVWTFEQDKKLIQLMANQDSYINFANLTPHFPDKDRNQLRSRYVTLLKWMKKHPTRDLSRAPRRGARRLLHGRGEGDMDLAIAKLKKRMLNDVNIKRTKKVTKNSPEDIIEHAIIAALITESVKAEDTANSIPEMELSDKDMQLPLNEPTNETNLRKLLILLKAKLNKQTFEKSLYAVKYPRLKQVEAESFTVKMKSYSRRAATNVITVGGQIHPPDIWGGHKLTTNEYVLPPNYATITGCRRLMAFASTKIHNSQRSSSFYTQRKLLVKEEVNLFMERFNTLFLWPTLLSNEPPKEQDDHQPIKMHIDKYVRRRECLQLPSCMSVIIPDKVNNLVNDQIDLPTTSTDTTVKSKVGNIDFMYIDGDDEQEDLSEFEAAIYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01336787;
- 90% Identity
- -
- 80% Identity
- -