Basic Information

Insect: Schlechtendalia chinensis
Gene Symbol: TFIP11
Assembly: GCA_019022885.1
Location: CM032339.1:55326062-55331084[-]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.41 5e+03 -2.8 0.0 156 182 216 243 206 248 0.68

2 4 0.43 5.1e+03 -2.8 0.0 137 151 286 300 282 321 0.76

3 4 1.3e-78 1.5e-74 251.5 17.0 3 275 385 651 383 651 0.97

4 4 0.2 2.4e+03 -1.7 0.1 234 260 655 681 652 694 0.62

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.41	5e+03	-2.8	0.0	156	182	216	243	206	248	0.68
2	4	0.43	5.1e+03	-2.8	0.0	137	151	286	300	282	321	0.76
3	4	1.3e-78	1.5e-74	251.5	17.0	3	275	385	651	383	651	0.97
4	4	0.2	2.4e+03	-1.7	0.1	234	260	655	681	652	694	0.62

Sequence Information

Coding Sequence: ATGTCGGACGATGAGATGGAGAAATTTGAAATCACCGACTTTGATTTAGACAACGAATTCAATATAAACAGACCTAAAAAACGACTGTCGAAAAATCAAGCAATTTATGGAATTTGGGCTGATGAAGAAGTTAAGGACAATAGTGATGAAGAAATTTCTGGTTTTGGAGGTCGCAGAAAAAAAGATAAAAAATATAAACAAAACTATACTGCTCCAGTTTCATTTGTAGCTGGAGGTATTCAACAGTCTAGTAAAGATAAAGAAATTAAAACTCAAGTAAACAATGAAGATGATGCAGAAAAATTTGATGATAATATATCTGCTTCTAGTGATGATGAAAAACCTGCCTTTAATTTTGATATTGATCAAGAATTAGCAGGCCTACGAAAAAAACGATCTCAAGTGAATCCAAGACTTATAAACAAAGGATTAGGAGATTGGGAAAAACATACAAAAGGAATTGGGGCAAAACTTTTGCTTGGAATGGGTTATCAACCAGGTCACGGCTTAGGGAAAAAACTTCAGGGTATTACAGCTCCAATTGAAGCCAATTTAAGAAAAGGAAGAGGAGCGATTGGTGCATATGGCCCGGAGTCTAAAACCAAACCCATGAAAATAGATAATGAACGACCATCAGATAAAATCAAAGATAATAAAGTTCCTGTACATGGGTGGAGAAAAGTATTAAAAGCAGAAAAAACACAATATATTTATAAAACAGTGGAAGAAGTGATTGAAGAAAGCAAACATCCAGGACAAAGAAAAAGAGAGTTTAATGAACTGAGTAGAGTAAAAGTGATTGACATGACTGGTCCAGAACAAAGAGTTTTATCTGGATACCATGCTATTTCTGGTGTTAAAAAACCAATTGATCAATGGGAAATACGAAAAGACAAGAAACTATCAAACTTTGACTTACCTGAATTATTACATAATCTCAATCTTTTAGTTGAAATAGCTGAACAAAACATTATAACAAACAATCAAGAACTTTGCACTAATGAAGATCGACTAATTTTTATTGAACGAGAAACTGGTATATTAAGTGAAAGTATTAAACAGAAGGATAAATCAATTGAGTCTCTTGAAAAAATGATAATTGTCATGGAATATTTAAATAGCGCGATGAAACTAAATATGTTAGATAGCAATCAAGCCATAAAACATTTAACAGAGTTGAAAGAAAATTATTACTCGGATTATCAAATAAATGGCGGATCAATTTTAGCATTATCAATTTCAGGATTATTAATTAAGGAAAAGCTATCTACATGGGACCCATTACAAGATCCAACAATGCCTTTCGAGGAGTTGAATAAATGGAAAAAACTATTAAATTCAAATGAGCCATGTGCTATTGGACCCCAATCAAGTGAAGAATTTCAAACATTAATTTGGCAAGAATGGGTACCTCAAGTTCAAAAAGCATGCAGGCGATGGCAATGTCGAGATTGTAATAGTATGTTAAAACTTATCGAACAATCATTCGAATTGATACCAATTGACATAATCAGTAACGTTCTTGAGAATATGATTTTACCAAAAATACAATCTGAAGTAGAACAATGGGACCCATTAACCGACCTTGTACCAATACATCTATGGATTCACCCTTGGTTACCGTATTTAAGCAAACATTTTACAACAATTGTCTATCCTACTCTAAGACAAAAACTAAGTACGGCTTTAAATGGCTGGCATCCATCAGACAACTCTGCTAAACTGATGCTTCAACCATGGATAAATGTCTTCCAGCAAGGCTACATAGAGTCTTTTCTAATCAAAAACATTGTTCCTAAATTACAAGCTGTTCTTCAAACTTTTGTAATCAACCCACATCATCAACAATTAGACTGTTGGAATTGGGTGAATGCATGGTCAGATTTATTGCCATTGCCCACATTAGTGGAACTACTAGACCAACATTTCTTCCCAAAGTGGCTTAAAACACTTACCATGTGGATAAATATGAAACCTAATCATGAACAAATAAGTAACTGGTATACAGGATGGAAGTCCTTGATGCCTGCTATTATTGTTGAACATCCAACGATAAAAGGGCGATTTCATTCTGCTTTGGATATAATGAGCCGAGCAGTTGGAGGACCTTCTATGCCACAACCACCACCACCACCTACCATCCTAGGTGGTCTAGCTGAAGCTGTACGTACCGCATCACAGATGCCTCATGGTTTTAAAGAATTGGTGCAAAAACGTTGTGAGGAACGTGGTATTTTATGGATGCCATTATCTGGTCGTTTTAGAGAAGCTAAACAAATATACAGATGTGGAGCAAGGCTTCAAGCATATATTGACCGTGGGGTTTTATTTGTTAGCCAAGATGGAACTAATTTCACTCCAATGTCTGTACAATCTATGTTAGAACTATGTGAATAA
Protein Sequence: MSDDEMEKFEITDFDLDNEFNINRPKKRLSKNQAIYGIWADEEVKDNSDEEISGFGGRRKKDKKYKQNYTAPVSFVAGGIQQSSKDKEIKTQVNNEDDAEKFDDNISASSDDEKPAFNFDIDQELAGLRKKRSQVNPRLINKGLGDWEKHTKGIGAKLLLGMGYQPGHGLGKKLQGITAPIEANLRKGRGAIGAYGPESKTKPMKIDNERPSDKIKDNKVPVHGWRKVLKAEKTQYIYKTVEEVIEESKHPGQRKREFNELSRVKVIDMTGPEQRVLSGYHAISGVKKPIDQWEIRKDKKLSNFDLPELLHNLNLLVEIAEQNIITNNQELCTNEDRLIFIERETGILSESIKQKDKSIESLEKMIIVMEYLNSAMKLNMLDSNQAIKHLTELKENYYSDYQINGGSILALSISGLLIKEKLSTWDPLQDPTMPFEELNKWKKLLNSNEPCAIGPQSSEEFQTLIWQEWVPQVQKACRRWQCRDCNSMLKLIEQSFELIPIDIISNVLENMILPKIQSEVEQWDPLTDLVPIHLWIHPWLPYLSKHFTTIVYPTLRQKLSTALNGWHPSDNSAKLMLQPWINVFQQGYIESFLIKNIVPKLQAVLQTFVINPHHQQLDCWNWVNAWSDLLPLPTLVELLDQHFFPKWLKTLTMWINMKPNHEQISNWYTGWKSLMPAIIVEHPTIKGRFHSALDIMSRAVGGPSMPQPPPPPTILGGLAEAVRTASQMPHGFKELVQKRCEERGILWMPLSGRFREAKQIYRCGARLQAYIDRGVLFVSQDGTNFTPMSVQSMLELCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01037788;
90% Identity: -
80% Identity: -