Spec010561.1
Basic Information
- Insect
- Schizotus pectinicornis
- Gene Symbol
- tfip11
- Assembly
- GCA_951805265.1
- Location
- OX638206.1:7425194-7430552[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-100 9.2e-96 320.8 11.7 2 275 388 658 387 658 0.97 2 2 0.25 2.5e+03 -2.1 0.0 243 268 671 696 662 702 0.64
Sequence Information
- Coding Sequence
- ATGTCCGAAGATGAAGTGGAGAAGTTCGAGATAACCGATTTCGACCTAAACAACGAGTTTTTCCGCAGCcgcaaaaaattaaccaaacacCAACAAATTTACGGTATATGGGCCGATGACAGCGACAACGAAGAAGATCAGAAATCTTCATTCAAATCATCGAAAAAAAGTTACTCAGCCCCGATCGGTTTTGTGGCTGGAGGCGTCCAACAGGCGGGAAAAAAGAAGAACGCCCCCAAAGAAAGTGACGCTGATAACGAGAAACCTACAACCTCCTCCAGAGGTAGAGGCTCCAGTTCCAGTGAGTCAGAGGAAGAACCGATTCGTTCAGGATTTGGGGCTTCAAAACCGGCAACACAATCTACCGTTACTGATATTAACGCAGAAATCGCGGGTCTTCGCACTAAAGctatcaaaaaagaaaacctGAAAGGTTTGGGAAATTGGGAGAAACATACCAAGGGAATTGGCGccaaattattgttacaaatGGGTTATAAGCCGGGGAAAGGGTTAGGAAAAGATCTTCAGGGGATTGCAGCACCTGTTGAAGCGCATCTGCGTAAAGGTCGAGGCGCAATTGGGGCTTACGGACCTGAAAAACCCGCCAGTATCCCCAAGAAGAAGGAAATCGTGGAGGAAATTGATGATAAAGAGGATAAGGATGAAAGTAAATGGAAGAAAAGCGACATGACGAAGAAGAAAACGCGTTATTACTATCGCAGCGTGGATGATGTTATCGAGAAGGGGAAGAGGCCGGgcgtttttggcaactttGGGGCCTCGAGCGAAATGAGCAAAGTGAAGGTGATCGACATGACAGGGCCGCAACAACGCGTTCTGAGCGGCTACCACGCGCTAAGTGGCCTAAAGGCGCCGCCGGGCGTCGAACATTACGAGGACGTGATCcacaaaaaatgttctaacTTTGCTCTGCCGGAAATTCAGCACAATCTGGACCTTCTGGTCGATATGTGCGAACAAGACATAATTCGGATTGACCGTAACAAGAGACACGGTGAGGACCGCATAGTAGTTTTGCAACAAGAACAAGACACTTTGAGGAAGTTGGTGCAAAAAGAGGACGACCTCATTGACGATTTAGAGAACGTTATCAAAACCGTTGAGAAGTTGCTCGACCCCTCTTTGGGGTTGTCGCTGTTGCAAGTTGCCCAAAAGTTCGACACTTTACAGGAACACCATTACGAAGAGTATGTTAGGTATGAACTGGGCGAGTTAGCGCCCGGTTTGGTCGGGCCTCTCTTGACTTCTGCTTTGGCGAGTTGGTCGCCTCTAACCGCCCCCAAGCAGTATTTCGATGTTTTTGCCCGATGGAAGGATATCCTGGACAAGCCCGGGCAACGTGGGACACTAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTTATGAGAATTTGTGTTAGTTCGTGGAACCCCAAGGATTGCGACCCACTCATAACGCTAATAGAGACCTGGATGCCGTTGTTGCCTCAATGGATATTGGATAACCTCTACGACCAACTTATAATGCCCAAAATCCAAGCGGAAGTGGAGGCTTGGAATCCGTTAACGGACACTGTTCCCATACATGTGTGGGTTCATCCCTGGATCCCGTTATTGAACGCCCGTCTCCAGTCGGTTATCTATCCGATGATTCAAGAAAAACTCGGTTCGGCCTTGGGCAATTGGCATCCCTCGGACCCATCGGCTAAACCCATGTTGAAGCCCTGGCAACGAGTTCTGCCTGACGGAACTTTTGTCGCGTTCCTCATCAAGCATATTGTGCCAAAACTGCAACTTTGCATGCAGTCGTTCGTCATAAACCCGCATCAACAGCATTTGGACGCCTGGCATTGGGTCATGGATTGGAGCGATATGGTGTCGGTGGGCAACATGACGTTGATCTTGGACAAGTTTTTTTTCCCGAGATGGCGCCAAACGCTCGCCATGTGGCTGAACCACAACCCGAATTACAACCAAGTGACTGAATGGTACTCGGGCTGGAAGCGAATGCTGTCAGACGAGCTGCTAGCTCAACCCACAATCAAAGAACATTTCCACGTGGCGCTGGAAATAATGAGCAGGGCCGTCAACATCGGGCAGCAGCCGGGGGCCAAAGAGTCAATTTCTTACCTCAGCAGCATGGAGAATAACGTGTTGACTCCGCCGCCGCCTCCCCACTTCGAGAGTTTCGCCGAGACTGTTAGGTCTGTTTCGAAGATCCCGCCTCTCTACAAGGATTTGGTCGCAAAGAGATGTGAAGAAAGAGGAATTCTTTTCGTACCGATCCCCAATAAGTACCACGAGGCCAAGCAAGTTTACAGGATAGGAAGTGGCGGAATTCAATGTTACATCGACAGAAACGTGGTGTTTTCGTCCAAAAATAACTCGACTTGGACGCCTACTTCGCTGAATCGGTTGTTGGATATGGCGTAA
- Protein Sequence
- MSEDEVEKFEITDFDLNNEFFRSRKKLTKHQQIYGIWADDSDNEEDQKSSFKSSKKSYSAPIGFVAGGVQQAGKKKNAPKESDADNEKPTTSSRGRGSSSSESEEEPIRSGFGASKPATQSTVTDINAEIAGLRTKAIKKENLKGLGNWEKHTKGIGAKLLLQMGYKPGKGLGKDLQGIAAPVEAHLRKGRGAIGAYGPEKPASIPKKKEIVEEIDDKEDKDESKWKKSDMTKKKTRYYYRSVDDVIEKGKRPGVFGNFGASSEMSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHYEDVIHKKCSNFALPEIQHNLDLLVDMCEQDIIRIDRNKRHGEDRIVVLQQEQDTLRKLVQKEDDLIDDLENVIKTVEKLLDPSLGLSLLQVAQKFDTLQEHHYEEYVRYELGELAPGLVGPLLTSALASWSPLTAPKQYFDVFARWKDILDKPGQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSSWNPKDCDPLITLIETWMPLLPQWILDNLYDQLIMPKIQAEVEAWNPLTDTVPIHVWVHPWIPLLNARLQSVIYPMIQEKLGSALGNWHPSDPSAKPMLKPWQRVLPDGTFVAFLIKHIVPKLQLCMQSFVINPHQQHLDAWHWVMDWSDMVSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYNQVTEWYSGWKRMLSDELLAQPTIKEHFHVALEIMSRAVNIGQQPGAKESISYLSSMENNVLTPPPPPHFESFAETVRSVSKIPPLYKDLVAKRCEERGILFVPIPNKYHEAKQVYRIGSGGIQCYIDRNVVFSSKNNSTWTPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01283392;
- 90% Identity
- iTF_01283392;
- 80% Identity
- -