Pser018607.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrochroa serraticornis
Gene Symbol
tfip11
Assembly
GCA_905333025.1
Location
HG995157.1:19883330-19894267[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-99 2.6e-95 319.5 12.3 2 275 389 659 388 659 0.97
2 2 0.25 2.8e+03 -2.1 0.0 243 268 672 697 663 703 0.64

Sequence Information

Coding Sequence
ATGTCGGAAGACGAAGTGGAAAAGTTTGAAATAACCGATTTCGACCTAAACAACGAGTTTTTTCGCAGTCGCAAAAAATTGACTAAACATCAACAAATTTACGGTATATGGGCCGATGACAGCGATAACGATGAAGACGCAAAACCGTCGTTTAAATCTACAAAAAATAGCTACTCAGCCCCTATCGGTTTTGTGGCTGGAGGCGTCCAACAGGCAGGAAAAAACAAGAGTAACGCCGTCAAAGAATCCGACGTTGATAACGAAAAACCCACAACTTCCTCAAAACTGACCGGTTCAAGTTCAAGTGAATCAGAGGAAGAACCGATGCGTTCAGGGTTTGGAGCGTCTAAATCGACAACACAATCTACAGTAACGGAAATTAACGCAGATATCGCAGGTCTTCGCAATAAAGCGATTAGAAAAGAAAATTTGAAAGGTTTGGGAAATTGGGAAAAACATACTAAAGGAATTGGGGCTAAATTATTGTTGCAAATGGGTTACAAACCCGGGAAAGGTTTAGGAAAAGATTTACAAGGGATTTCAGCGCCTGTTGAAGCGCATTTACGGAAAGGTCGCGGGGCAATTGGCGCTTATGGTCCTGAAAAACCCGCCAGTATCCCGAAAAGAAAGGAAAATCAAGAGGAAGTTGATGTTGAAGATGATAAAGATGAAACTAAATGGAAGAAAGGCGATATGGCGAAAAAGAAAACGCGGTATTATTATCGCAGCGTCGATGATGTTATTGAAAAGGGGAAAAGGCCCGGGATTTTCAACAGTTTTGGGGCCTCAAGTGAAATGAGCAAAGTCAAAGTGATCGACATGACAGGGCCTCAACAGCGTGTTTTGAGCGGCTACCACGCTTTAAGTGGTTTGAAGGCGCCACCTGGTGTCGAACATTATGAAGACGTCATTCACAAGAAATGTTCCAATTTCGCTCTGCCTGAAATCCAACACAATTTAGACCTATTGGTTGATATGTGTGAACAAGACATTATTCGGATTGACCGTAACAAGAGACATGGTGAAGACCGCATAATAGTTTTGCAACAAGAACAAGAAACTTTGAGAAAATTGGTGCAAAAAGAGGACGATCTTATCGACGATTTACAAAACGTTATTGAAATTGTCGATAAATTACTAGATCCCTCTTTGGGGTTATCACTATTACAAGTGGCGCAAATATTCAACAATTTACAGGAGCACCATTACGAAGAATATGTTAGGTATGAGTTGGGCGAGTTAGCGCCTGGTTTGGTTGGGCCTCTTTTGACTTCTGCTTTGGCGAACTGGTCGCCTTTAACCGCCCCCAAGCACTATTTTGATGTTTTTGCCAGATGGAAGGATATCCTGGACAAGCCCGGGCAACGTGGGACACTAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTTATGAGAATTTGTGTTAGTTCTTGGAATCCGAAAGATTGCGATCCTCTCATAATGCTGATAGAAACCTGGATGCCTTTATTGCCCCAATGGATAATGGATAACCTCTACGACCAGCTGATAATGCCCAAAATCCAAGCGGAAGTGGAAGCTTGGAACCCTTTAACAGACACTGTTCCCATACATGTATGGGTCCATCCTTGGATACCGTTATTGAACACGCGTCTTCAATCAGTCATTTATCCGATGATCCAAGAGAAACTTGGATCAGCTTTGGGCAACTGGCATCCATCTGACCCTTCGGCCAAACCGATGTTGAAACCGTGGCAAAGAGTGTTGCCAGACGGAACTTTCGTCGCTTTCCTCATCAAGCATATCGTGCCAAAACTGCAACTTTGCATGCAGTCCTTCGTTATAAACCCCCATCAACAACATTTGGACGCGTGGCATTGGGTCATGGATTGGAGCGATATGGTTTCGGTTGGGAACATGACGTTGATTTTGGATAAATTCTTTTTTCCGAGATGGCGCCAAACGCTCGCTATGTGGCTGAACCATAACCCGAACTACAACCAAGTGACTGAATGGTATTCGGGATGGAAACGAATGCTATCAGATGAGTTGCTAGCTCAACCCACAATCAAAGAACATTTCCATGTGGCTCTAGAAATAATGAGCAGGGCCGTCAACATCGGACAACAACCTGGAGCTAAAGAATCGATTTCTTACCTCAGCAGTATGGAGAATACCGTGTTACCGCCGCCACCGCCCCCTCGTGTCGAGAGTTTTGCCGATACTGTTAGATCAGTTTCGAAAATTCCGCCTCTCTACAAGGATTTAGTAGCGAAAAGGTGTGAGGAAAGAGGAATTCTTTTCGTACCTATCCCTAATAAATATCACGAAGCCAAACAAGTTTACAGGATAGGAAGTAACGGAATTCAATGTTACATCGATAGGAACGTGGTGTTTTCGTCGAAAAATAATTCAACTTGGACCCCTAGTTCACTGAATCGATTGTTGGATATGGTGTAA
Protein Sequence
MSEDEVEKFEITDFDLNNEFFRSRKKLTKHQQIYGIWADDSDNDEDAKPSFKSTKNSYSAPIGFVAGGVQQAGKNKSNAVKESDVDNEKPTTSSKLTGSSSSESEEEPMRSGFGASKSTTQSTVTEINADIAGLRNKAIRKENLKGLGNWEKHTKGIGAKLLLQMGYKPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKPASIPKRKENQEEVDVEDDKDETKWKKGDMAKKKTRYYYRSVDDVIEKGKRPGIFNSFGASSEMSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHYEDVIHKKCSNFALPEIQHNLDLLVDMCEQDIIRIDRNKRHGEDRIIVLQQEQETLRKLVQKEDDLIDDLQNVIEIVDKLLDPSLGLSLLQVAQIFNNLQEHHYEEYVRYELGELAPGLVGPLLTSALANWSPLTAPKHYFDVFARWKDILDKPGQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSSWNPKDCDPLIMLIETWMPLLPQWIMDNLYDQLIMPKIQAEVEAWNPLTDTVPIHVWVHPWIPLLNTRLQSVIYPMIQEKLGSALGNWHPSDPSAKPMLKPWQRVLPDGTFVAFLIKHIVPKLQLCMQSFVINPHQQHLDAWHWVMDWSDMVSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYNQVTEWYSGWKRMLSDELLAQPTIKEHFHVALEIMSRAVNIGQQPGAKESISYLSSMENTVLPPPPPPRVESFADTVRSVSKIPPLYKDLVAKRCEERGILFVPIPNKYHEAKQVYRIGSNGIQCYIDRNVVFSSKNNSTWTPSSLNRLLDMV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01329809;
90% Identity
iTF_01329809;
80% Identity
-