Basic Information

Insect: Schizotus pectinicornis
Gene Symbol: clz9_1
Assembly: GCA_951805265.1
Location: OX638208.1:11582066-11584258[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4e-14 2.7e-11 43.1 0.0 2 38 17 54 16 59 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4e-14	2.7e-11	43.1	0.0	2	38	17	54	16	59	0.92

Sequence Information

Coding Sequence: ATGGTGCGgaattacaagaaaaaagaGACTAGGTGTACAttaataaatgaagaaaatatgtCCTCGGCAATAAAAGATGTTTTGGAAGGAAAAATGTCATATAGAAAAGCAGCGGATAAGTATAACATTAAGGCCTCAACTTTGGAGAGTCGGGTAAAGAAAATGAAAGATAAACATGATGATGCTGACGCGAGCGGTACGTATCAGTCTAAATTTACCAGTTTTCAAGTATTTTCTAAAGAACAAGAGTCCCAATTGAAcgaatatataaaaaaaagctCAAAAATGCATTACGGGCTCACAATATTACAAGCCAGAAAGCTGGCATATGAATATGCTAAAGCTCTGAAATGTACATATCCGCCAAAATGGGATCAAGCTGGATTGGCTGGTATAGACTGGATCCATGGATTTCGGAAGAGAAATAGTAGTTTGAGTTTAAGAAAACCCGAAAACACGAGTGCTGCTCGATCTTTTGCTTTCAATAAAACAGTCGTATATGAGTTTTacgataatttgaaaactgtttATGAAAGATATAAGTTTACTGCAGATCGTATATTTAATTTCGATGAGTCTGGTATATCGACGGTTTTAGACACTCCAAAAGTGTTAGCTGCAAAGACTCAAAAACAGGTCGGGCAAATAGTATCTGCAGAACGAGGTGAATTAGTCACATTTGGCGGCATTATTTCAGCAAGCGGAAATACAATTCCGCCACTTTTTGTATTTCCACGAGTACATTATAAAGACCACTTCATGGAAGGAGCTCCTGAAGGTAGTATTGGAGCTACAAATAGATCTGGCTGGATCAACTCTGAAATATTTCTAGACGTATTGAAACACATAAAGAAACATACACTGAGTACTAAAGAAAATCCAATTTTATTACTATGTGACAATCATGAGAGTCACATTAGTTTGGCAGCAATTAACTACGCACGAGATAATGGCATAATTTATTTGTCGTTCCCACCACACACGTCTCACAGGCTTCAACCTCTAGATGTTGGAgtgtttgggccgtttaaatcaaaattgaaaacagtGATGAATGATTGGCACGTGACAAATCCAGGGAAAACAATCAGTATTTACAATATCCCAAAAATAGCTAAGATAGCATACTTTGAAGCGTTCACTCCTAAGAACATCACAAGTTCATTCAGTTCACCAGGCATATGGCCATTTAATCAATTGGCTTTCAGTGATGGAGATTTTGCACCAATTGAGGTATATACGTCCAGCAACGCAAACATTGACTGTCCAGAAAATTCCAATACAAATAATAATCAACCAATGCAAGAACCTTATAATAATGCTAACGACACATCTGGAACTTTGGCTTGTAGTGAAGAGTTACTCCAAAATGTTCACATAGATGCAGCATCTTCTTCTCAGGAACATCCAGTCGTAAGCATTGAAACAACTGATCTCGATTCTGCATCCGGAGTTGAGGCGACACATAAAACTCCTTCTCGACAACTTGAAGGTCGGTATCAGACTTCTGAGTCGCTAGAAAAACCAAGTCCTATTACACCAGCAATGATTCGGCCTTATCCTACAGctgataaaaagaaaaaaaccacAAAAGGAAGGCAACCAGGAAAGTCCAGAATTTACACCGATACGCCGGAAAAAAATAGGTTGGAAGATTTGCACAATGCGAAACATTTAAAGAAACAAGAACAAGAAAGAAAAGCGAAAGCGAGAGAATTGAAACGCACGTTAAAATTTGACGCACAATCTAagccaaaaaaatcaaaaaagaaaaaagaaagcagTGATTCCGAGTCTGAAAATTCTGACATTAGTTTACAAGAAAGTTCGACATTAGTAGTAGATTATTCTGATGACAATGAAGATGAATATGTCGATGCTACCGTgagggccaaaaaaattaaagacaacaGTTTTGTCTtaatcaaatttgcaaaaaaaaaatcgattgttTACTACGTGGCTAAAGTTATAAGCCATTATTCTCAAACGGAATTTAAGGTCTcgtatttaagaaaaaaaccaGGAAAATCCTATTCTTTTATGTTTCCTAATATTGAGGACACACATAGCGTTGGCGTTTCTGATGTCACGTTGGTTCTGCCTAATCCGAAATCTCCAGGAGCTTTTACGGCTAGAACCTCTAAATTATTCACATTTCCTATTGATTTCACACAATACAATGTGCAATAA
Protein Sequence: MVRNYKKKETRCTLINEENMSSAIKDVLEGKMSYRKAADKYNIKASTLESRVKKMKDKHDDADASGTYQSKFTSFQVFSKEQESQLNEYIKKSSKMHYGLTILQARKLAYEYAKALKCTYPPKWDQAGLAGIDWIHGFRKRNSSLSLRKPENTSAARSFAFNKTVVYEFYDNLKTVYERYKFTADRIFNFDESGISTVLDTPKVLAAKTQKQVGQIVSAERGELVTFGGIISASGNTIPPLFVFPRVHYKDHFMEGAPEGSIGATNRSGWINSEIFLDVLKHIKKHTLSTKENPILLLCDNHESHISLAAINYARDNGIIYLSFPPHTSHRLQPLDVGVFGPFKSKLKTVMNDWHVTNPGKTISIYNIPKIAKIAYFEAFTPKNITSSFSSPGIWPFNQLAFSDGDFAPIEVYTSSNANIDCPENSNTNNNQPMQEPYNNANDTSGTLACSEELLQNVHIDAASSSQEHPVVSIETTDLDSASGVEATHKTPSRQLEGRYQTSESLEKPSPITPAMIRPYPTADKKKKTTKGRQPGKSRIYTDTPEKNRLEDLHNAKHLKKQEQERKAKARELKRTLKFDAQSKPKKSKKKKESSDSESENSDISLQESSTLVVDYSDDNEDEYVDATVRAKKIKDNSFVLIKFAKKKSIVYYVAKVISHYSQTEFKVSYLRKKPGKSYSFMFPNIEDTHSVGVSDVTLVLPNPKSPGAFTARTSKLFTFPIDFTQYNVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00179073; iTF_00179074; iTF_00179075; iTF_00179076; iTF_00179077; iTF_00179078; iTF_00179079; iTF_00179080; iTF_00179081; iTF_00179082; iTF_00179083; iTF_00179084; iTF_00179085; iTF_00179086; iTF_00179087; iTF_00179088; iTF_00179089; iTF_00179090; iTF_00179091; iTF_00179092; iTF_00179093; iTF_00179094; iTF_00179095; iTF_00179096; iTF_00179097; iTF_00179098; iTF_00179099; iTF_00179100; iTF_00744537;
90% Identity: -
80% Identity: -