Acin000794.1
Basic Information
- Insect
- Athripsodes cinereus
- Gene Symbol
- clz9
- Assembly
- GCA_947579605.1
- Location
- OX388318.1:12012740-12014944[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-12 2.9e-10 41.1 0.0 2 38 17 54 16 58 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGGAATTACAAGAAGAAAGAGACTAGGTCCACATTAATAAATGAAGAAAATATGACTTCTGCAATAAAAGATGTTTTGGAAGGAAAATTGTCTTACAGAAAAGCAGCGGATAAATATAACATTAAGGCCTCAACTTTGGAGAGTCGGGTAAAGAAAATAAAAGGTAAACCTAATAATACTGACACGAGCCGTTCATATCAGTCTAAATTTACAAGTTACCAAGTATTTTCTACTGAAGAAGAGTCACAATTAAACAGATACATTGAAAAAAGTtcgaaaatgcattacgggctcacactattacaagtcaggaagctggcatatgattatgctaaagctttgaaatgtaaatatccaccaaaatgggatgaaactaatttggctggtatagattggattcatggatttcgaaagagaaatagtagtttaagtttgagaaaaccagaaaatacaagtaatgccagatcttttgcattcaataaaacactcgtaaatgagttttattgtaatttaaaaactgtatatgaaaggtacaaattcactgcagatcgtatatttaattttgatgagtctggcatatcgacagtgttagacactccaaaagtgttagctgcaaagacacaaaaacaagtcgggcaaatagtgtctgcagaaagaggtgaactagtcacatttggcggcattatctcagcaagcggaaacacaattccgccactatttgtatttccaagagtacattacaaaggttactttatggaaggagctcctgaaggtagtattggggcaacaaatagaactggctggatcaattccgagatatttctagacgttttaaaacatataaacaaacatacgctgagtactaaagaaaatccaatccttttactgtgcgacaatcatgaaagtcacattagtttgccagcgattaactatgcacgagataatggcataatttatttgtcattccccccacacacatctcacaagcttcaaccgttagatgttggagtgtttgggccatttaaatccaaattgaagacagccttcaatgactggcacgtgacaaatgcagggaagacaatcaccatttacaatattccgaaaattgccaagatagcatactttgaagcttttactgctaagaatatcataagtgcgttcacttcgccaggcatttggcctttcaatcaattggctttcagtgatgaagattttTCACCAATTGAAGTGTACACATCCAGCAACGCAAACATTGATTGTCCTGCTCAGAAACCAGAAAATACCAACACAACTAATAATCAACCAACGCAAGAACCTCTAAATAATGATAACGACACAACTGGAACTTTGGCTTCTTCTAAAAAGTTACTACAAAATATTCACACAGAAGCAGCTTCATCTACTCAGGCACATCCACTAGTAAGCGCTGAAACAACTTACCTAAATTCTGCATTGGGAATTGAGGCGACGCAGAAAACGCCTCCTCGAGTAGTTGGAGTTCAGTATCAGATTTCTGAGTCACAAGAAATACCAAGTCCTATTACACCAGCAATGGTTCGGCCTTATCCTACAGCTGAGAAAAAGAAAAAAACAACGATGGGAAGGCAACCAGGAAAGTCCAGAATTTACACTGATACGCCGGAAAAAAATAGGCTGGAAGATTTGCAAAATGCGAAGCAATTGAAAAAAACAGAGCAGGAAAGAAAAGCGAAAGCGAGAGAGATGAAACGCACTTTAAAAATTGCTGCACACTCCAAGCCAAAAAAATCAAAAAAGAAAGAAGAAAGCAGTGATTCGGAATCTGAAAATTCTGAGGTTAGTTTACAGGAGAGTTCGACATCATTAGTAGATTATTCTGATGACAATGAAGGTGAAGATTTTGATGCTACTGTGAGACCCGAAAATATTAAGGACAACTCTTTTGTTTTAGTCAAATTTGCAAAAAAAAAGTCTATTATCTATTACGTAGCAAAAGTTATGAGCCATTATTCTGAAACGGAATTTAAGGTCTCGTTTTTAAGAAAAAATCCAGGGCTATCCTGCTCGTTTGTGTTTCCTAATATTGAAGACGAACATGGCGTGGACATTTCTGATGTCGCTTTGATTCTTCCTAACCCGAAATCTCCAGGAGCCCCTACAGCCAGGACATCTAAATTATACAAATTTCCTATAGATTTCTCACGATTTAGTGTGCAATAA
- Protein Sequence
- MVRNYKKKETRSTLINEENMTSAIKDVLEGKLSYRKAADKYNIKASTLESRVKKIKGKPNNTDTSRSYQSKFTSYQVFSTEEESQLNRYIEKSSKMHYGLTLLQVRKLAYDYAKALKCKYPPKWDETNLAGIDWIHGFRKRNSSLSLRKPENTSNARSFAFNKTLVNEFYCNLKTVYERYKFTADRIFNFDESGISTVLDTPKVLAAKTQKQVGQIVSAERGELVTFGGIISASGNTIPPLFVFPRVHYKGYFMEGAPEGSIGATNRTGWINSEIFLDVLKHINKHTLSTKENPILLLCDNHESHISLPAINYARDNGIIYLSFPPHTSHKLQPLDVGVFGPFKSKLKTAFNDWHVTNAGKTITIYNIPKIAKIAYFEAFTAKNIISAFTSPGIWPFNQLAFSDEDFSPIEVYTSSNANIDCPAQKPENTNTTNNQPTQEPLNNDNDTTGTLASSKKLLQNIHTEAASSTQAHPLVSAETTYLNSALGIEATQKTPPRVVGVQYQISESQEIPSPITPAMVRPYPTAEKKKKTTMGRQPGKSRIYTDTPEKNRLEDLQNAKQLKKTEQERKAKAREMKRTLKIAAHSKPKKSKKKEESSDSESENSEVSLQESSTSLVDYSDDNEGEDFDATVRPENIKDNSFVLVKFAKKKSIIYYVAKVMSHYSETEFKVSFLRKNPGLSCSFVFPNIEDEHGVDISDVALILPNPKSPGAPTARTSKLYKFPIDFSRFSVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01329711;
- 90% Identity
- iTF_00179074; iTF_00179075; iTF_00179076; iTF_00179077; iTF_00179078; iTF_00179079; iTF_00179080; iTF_00179081; iTF_00179082; iTF_00179083; iTF_00179084; iTF_00179085; iTF_00179086; iTF_00179087; iTF_00179088; iTF_00179089; iTF_00179090; iTF_00179091; iTF_00179092; iTF_00179093; iTF_00179094; iTF_00179095; iTF_00179096; iTF_00179097; iTF_00179098; iTF_00179099; iTF_00179100;
- 80% Identity
- iTF_00179074; iTF_00179075; iTF_00179076; iTF_00179077; iTF_00179078; iTF_00179079; iTF_00179080; iTF_00179081; iTF_00179082; iTF_00179083; iTF_00179084; iTF_00179085; iTF_00179086; iTF_00179087; iTF_00179088; iTF_00179089; iTF_00179090; iTF_00179091; iTF_00179092; iTF_00179093; iTF_00179094; iTF_00179095; iTF_00179096; iTF_00179097; iTF_00179098; iTF_00179099; iTF_00179100;