Acin030446.1
Basic Information
- Insect
- Athripsodes cinereus
- Gene Symbol
- clz9
- Assembly
- GCA_947579605.1
- Location
- OX388328.1:13983065-13985269[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-12 2.9e-10 41.1 0.0 2 38 17 54 16 58 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGGAATTACAAGAAGAAAGAGACTAGGTCCACATTAATAAATGAAGAAAATATGACTTCTGCAATAAAAGATGTTTTGGAAGGAAAATTGTCTTACAGAAAAGCAGCGGATAAATATAACATTAAGGCCTCAACTTTGGAGAGTCGGGTAAAGAAAATAAAAGGTAAACCTAATAATACTGACACGAGCCGTTCATATCAGTCTAAATTTACAAGTTACCAAGTATTTTCTACTGAAGAAGAGTCACAATTAAACAGATACATTGAAAAAAGTtcgaaaatgcattacgggctcacactattacaagtcaggaagctggcatatgattatgctaaagctttgaaatgtaaatatccaccaaaatgggatgaaactaatttggctggtatagattggattcatggatttcgaaagagaaatagtagtttaagtttgagaaaaccagaaaatacaagtaatgccagatcttttgcattcaataaaacactcgtaaatgagttttattgtaatttaaaaactgtatatgaaaggtacaaattcactgcagatcgtatatttaattttgatgagtctggcatatcgacagtgttagacactccaaaagtgttagctgcaaagacacaaaaacaagtcgggcaaatagtgtctgcagaaagaggtgaactagtcacatttggcggcattatctcagcaagcggaaacacaattccgccactatttgtatttccaagagtacattacaaaggttactttatggaaggagctcctgaaggtagtattggggcaacaaatagaactggctggatcaattccgagatatttctagacgttttaaaacatataaacaaacatacgctgagtactaaagaaaatccaatccttttactgtgcgacaatcatgaaagtcacattagtttgccagcgattaactatgcacgagataatggcataatttatttgtcattccccccacacacatctcacaagcttcaaccgttagatgttggagtgtttgggccatttaaatccaaattgaagacagccttcaatgactggcacgtgacaaatgcagggaagacaatcaccatttacaatattccgaaaattgccaagatagcatactttgaagcttttactgctaagaatatcataagtgcgttcacttcgccaggcatttggcctttcaatcaattggctttcagtgatgaagattttTCACCAATTGAAGTGTACACATCCAGCAACGCAAACATTGATTGTCCTGCTCAGAAACCAGAAAATACCAACACAACTAATAATCAACCAACGCAAGAACCTCTAAATAATGATAACGACACAACTGGAACTTTGGCTTCTTCTAAAAAGTTACTACAAAATATTCACACAGAAGCAGCTTCATCTACTCAGGCACATCCACTAGTAAGCGCTGAAACAACTTACCTAAATTCTGCATTGGGAATTGAGGCGACGCAGAAAACGCCTCCTCGAGTAGTTGGAGTTCAGTATCAGATTTCTGAGTCACAAGAAATACCAAGTCCTATTACACCAGCAATGGTTCGGCCTTATCCTACAGCTGAGAAAAAGAAAAAAACAACGATGGGAAGGCAACCAGGAAAGTCCAGAATTTACACTGATACGCCGGAAAAAAATAGGCTGGAAGATTTGCAAAATGCGAAGCAATTGAAAAAAACAGAGCAGGAAAGAAAAGCGAAAGCGAGAGAGATGAAACGCACTTTAAAAATTGCTGCACACTCCAAGCCAAAAAAATCAAAAAAGAAAGAAGAAAGCAGTGATTCGGAATCTGAAAATTCTGAGGTTAGTTTACAGGAGAGTTCGACATCATTAGTAGATTATTCTGATGACAATGAAGGTGAAGATTTTGATGCTACTGTGAGACCCGAAAATATTAAGGACAACTCTTTTGTTTTAGTCAAATTTGCAAAAAAAAAGTCTATTATCTATTACGTAGCAAAAGTTATGAGCCATTATTCTGAAACGGAATTTAAGGTCTCGTTTTTAAGAAAAAATCCAGGGCTATCCTGCTCGTTTGTGTTTCCTAATATTGAAGACGAACATGGCGTGGACATTTCTGATGTCGCTTTGATTCTTCCTAACCCGAAATCTCCAGGAGCCCCTACAGCCAGGACATCTAAATTATACAAATTTCCTATAGATTTCTCACGATTTAGTGTGCAATAA
- Protein Sequence
- MVRNYKKKETRSTLINEENMTSAIKDVLEGKLSYRKAADKYNIKASTLESRVKKIKGKPNNTDTSRSYQSKFTSYQVFSTEEESQLNRYIEKSSKMHYGLTLLQVRKLAYDYAKALKCKYPPKWDETNLAGIDWIHGFRKRNSSLSLRKPENTSNARSFAFNKTLVNEFYCNLKTVYERYKFTADRIFNFDESGISTVLDTPKVLAAKTQKQVGQIVSAERGELVTFGGIISASGNTIPPLFVFPRVHYKGYFMEGAPEGSIGATNRTGWINSEIFLDVLKHINKHTLSTKENPILLLCDNHESHISLPAINYARDNGIIYLSFPPHTSHKLQPLDVGVFGPFKSKLKTAFNDWHVTNAGKTITIYNIPKIAKIAYFEAFTAKNIISAFTSPGIWPFNQLAFSDEDFSPIEVYTSSNANIDCPAQKPENTNTTNNQPTQEPLNNDNDTTGTLASSKKLLQNIHTEAASSTQAHPLVSAETTYLNSALGIEATQKTPPRVVGVQYQISESQEIPSPITPAMVRPYPTAEKKKKTTMGRQPGKSRIYTDTPEKNRLEDLQNAKQLKKTEQERKAKAREMKRTLKIAAHSKPKKSKKKEESSDSESENSEVSLQESSTSLVDYSDDNEGEDFDATVRPENIKDNSFVLVKFAKKKSIIYYVAKVMSHYSETEFKVSFLRKNPGLSCSFVFPNIEDEHGVDISDVALILPNPKSPGAPTARTSKLYKFPIDFSRFSVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01329711;
- 90% Identity
- iTF_00179073;
- 80% Identity
- iTF_00179073;