Sgrm007289.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- cnc
- Assembly
- GCA_003264975.1
- Location
- QEWZ01000258.1:6871946-6924070[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-15 1.5e-12 47.9 6.3 3 61 655 713 653 717 0.92
Sequence Information
- Coding Sequence
- ATGTTTAGAAATCAGGACGCCGAGCTTGTGGAAGCCCTTTGGAAAGTTGATTTGGATTATGGATTGTCTGGCGCCACAACCGAGAGTCGCGGACCTTCTCCTTATAACGTTGGATCTTTCTTGTTACCTGGTGATGAACCACCATCGCGCAATCACACTTTCAGCAGTCCCCCCAGTTCGTCCCGTGGACGTTGGTACCTTCCACCGCTGAATACAAACTCGAGTGACTTATCGCCAAGCTCCAGTTCATTTCCGagTCGATTTGAACGCAACCTAAACTCTGATGGAAATTCTTGGGAGGTCGGTAGTTTGTTGGTGGACCTCAGAACTACAGGCGAAAGTCGTTCGAGACGAGTGCCCAGTGATAATGATACCGAAACATCGGATTTGGATGCTGATGAATCTACTGAACACAAAAATGACCGGTCAAGTAGTAACAGTGCATCTCCGAGCTTAACGCCAGGATTTCGTgtgAAAGAATCTCCGTGGTACGAACCATCGTTCGAGTTTGACTTTGATGAACTTGAATCTTTTGCAGACATGATGCAGTGTTATTCTCAACCACCGCCATCTTCCAGGCATTTTCaaGGCAGGATGGGCTACACAAGAACAGGCAACAGTGGAATGGACCAGCGAGGCTGGCAGGACTTGGCCACGTGCAGCCCTATGCTGGCGTTCCCGGTCGAAGGACAGCACCACCATCATCAGCCCCATTACGGCCAGCACCCGTCCAGCGCGCTCAGTTACCCGCCCGGGCCCGGCATGTATCATCATCCTCATCACCACCAACACCACCACCAACACAACACtcacaacagcaacaacaacacgGGAAACGTGTTGTTGCAGAACGTGAGCCTGTGCGCGCCTCCACCGCCACCACCTCCGCCAGCGTCCACGTCCATTGACATGGGTGTAGGCCACGCGACCACGTCTTCGTCGTCGTCCCTATCACACTATCATCACCACTCTTCATCGATCGGTGTGTCGACCAACTGCAATCTTAGTTCAGCCGTTGCCACTTCGCTTCACTTACCAGGCAGTTCATCCGAACAGCCTGCAGCGTTCAAGACAGAACCCCATCAACATGAAATGATGTTTCCCTATCAGAATCACAATAACGAAATGGCTCCTTCATCGGATGGACTTTTGTCGTCGATATTAAACGACGACGACTTGCAGCTTATGGACCCATCGATGGGTGCGGATGGTGGCATGTACCCGGTGCGGATGATGGACACAGCTAGTAACTCGGTGCCGTGCAACAACAACACGATGAACACCGCAACTATGGTACAAAACGGTAATGCGGGCGGTGGTGACTCGGACAGCGCCGTTAGTTCAATGGGCTCAGAACGCGTGCCCTCGCTGTCGTCGGACACCGAATGGATGGAAACCAACTCGGACAGTGGACACAATGATGGATACCCGTCCCATTCCCATCAAGAATATGGAAAAATGAGGTGGTTGGACAATTATCTGTATTCCGGAAATCGTGGTCATTCGGCTGCTCCGCAAAAGAAATATCAGTTGTACGGAAGACGCCTAACAGATCCTGTATCaggtaccCCAAACGCCACTGAAACGACAAGGCCTAATCACGTTGGTCTAGTGCCCGATTCGTTGAACCTGCCTTATGATATGTCCGTCAGGGAAGGCATTCCAGTGCCTGGTTCTTCACAGTTTAACAGGCACATGGCTGGTTGTTCACGTGTAATGACACCCGAACACCAAGTGGCTCTCAACCATACGTATGCACTACCTGCCGAAGGTCCCAGGACACCACGTAACAAGTTCAAGAACAGCAGTAAGAGGAGCGAGGATGAACAACTAACAAGAGACGAGAAGAGGGCCAGAAATCTGAATATTCCTATCAGCGTCGACGACATAATCAATCTTCCCATGGATGAATTTAACGAGAGGCTGTCCAAGTACGACCTATCTGAAAGTCAGCTGACATTGATTAGAGATATTAGACGTCGAGGAAAAAACAAGgtggCTGCTCAAAATTGCCGGAAACGTAAGCTGGATCAAATCCTCAGCTTAGCCGACGAAGTAAAACAAATGAAAGACCGAAAGTTCAATCTGTTACAAGAACGTGAATACTTAATGACCGAGCGTATGAGAGTCAAAACCAAATATGATCTACTTTATAACCATATATTTGCAAGTTTAAGAGATCCTGACGGAAATCCGTACTCTCCATATACTCATACGCTGCGTGAGCAGCCAGACGGCAGTGTTAGTATTGTACCCAGAAATAATGGTACCCAAAGCGACCGGAATCCTCGGTCTAAGCAACACAAGGACAAGTAA
- Protein Sequence
- MFRNQDAELVEALWKVDLDYGLSGATTESRGPSPYNVGSFLLPGDEPPSRNHTFSSPPSSSRGRWYLPPLNTNSSDLSPSSSSFPSRFERNLNSDGNSWEVGSLLVDLRTTGESRSRRVPSDNDTETSDLDADESTEHKNDRSSSNSASPSLTPGFRVKESPWYEPSFEFDFDELESFADMMQCYSQPPPSSRHFQGRMGYTRTGNSGMDQRGWQDLATCSPMLAFPVEGQHHHHQPHYGQHPSSALSYPPGPGMYHHPHHHQHHHQHNTHNSNNNTGNVLLQNVSLCAPPPPPPPPASTSIDMGVGHATTSSSSSLSHYHHHSSSIGVSTNCNLSSAVATSLHLPGSSSEQPAAFKTEPHQHEMMFPYQNHNNEMAPSSDGLLSSILNDDDLQLMDPSMGADGGMYPVRMMDTASNSVPCNNNTMNTATMVQNGNAGGGDSDSAVSSMGSERVPSLSSDTEWMETNSDSGHNDGYPSHSHQEYGKMRWLDNYLYSGNRGHSAAPQKKYQLYGRRLTDPVSGTPNATETTRPNHVGLVPDSLNLPYDMSVREGIPVPGSSQFNRHMAGCSRVMTPEHQVALNHTYALPAEGPRTPRNKFKNSSKRSEDEQLTRDEKRARNLNIPISVDDIINLPMDEFNERLSKYDLSESQLTLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVKQMKDRKFNLLQEREYLMTERMRVKTKYDLLYNHIFASLRDPDGNPYSPYTHTLREQPDGSVSIVPRNNGTQSDRNPRSKQHKDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972796;
- 90% Identity
- iTF_00018758; iTF_01303930; iTF_01305287; iTF_00972796; iTF_00133983;
- 80% Identity
- -