Rpad001256.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- cnc
- Assembly
- None
- Location
- scf7180000008500.564142:154833-248093[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-15 1.9e-12 47.5 6.3 3 61 812 870 810 874 0.92
Sequence Information
- Coding Sequence
- ATGAGACATAAGAAAAAAATCATGTTGCGAATTAAAAAAGGATTTTCGGAGCAGTTGCTCCAGATGGCATTGCTGTTAAGTCTTATAGGCTACGATCGTCTGTGGCCAACATTTGGGATATGGCCTTCGGCACCTTCGGCCGAAATAGAAGTAGGGCCTTTAGATCAATGGGGCGACGACAGCTATTCAAATGGCTTTGGTCCACTAACGCAAATCCACCCCAAAAGTGTTGATCGATATTTGGATCGACAATGGCTGTTAAACGAATTGTTATCGTTGGGTAGATATGGCGATCGATATCCATCAAATATAGAGGCATATTTGCTTAATGTGGACGGTGACGAGAATGGCAGAGACGATCAGCAGCAGCAAGACTCGGGTGGTCAAGTTGTAAAAACTGAACCTAAAGAAAGCGATAATGAAGACGATGATGTGGATAGAGTATTTGACACAGATATTGTTGAAGATGTTTTTATGCTTGCGCCAGAGGACGCCGAGCTTGTGGAATCCCTTTGGAAAGTTGATTTGGATTATGGATTGTCTGGCGCCACAACCGAGAGTCGCGGACCATCTCCTTATAACGTTGGATCTTTCTTGTTACCTGGTGACGAACCGCCATCGCGCAATCACACTTTCAGCAGTCCCCCCGGTTCGTCCCATGGACGTTGGTACCTTCCACCGCTCAATACAAACTCGAGTGACTTATCGCCAAGCTCCAGTTCATTTCCGAGTCGATTTGAACGCACCCTAAACTCTGATGGAAATTCTTGGGAGGTCGGTAGTTTGTTGGTGGACCTCAGAACTACAGGCGAAAGTCATTCGAGACGAGTGCCCAGTGATAATGATACCGAAACGTCGGATTTGGATGCCGATGAATCTACTGAACACAGAAATGACCGGTCAAGTAGTAACAATGCATCTCCAAGCTTAACGCCAGGATCTCGTGTGAAAGAATCTCCGTGGTACGAACCATCGTTCGAGTTTGACTTTGATGAACTTGAATCTTTTGCAGACATGATGCAGTGTTATTCTCAACCACCGCCATCTTCCAGGCATTTCCAAGGTAGGATGGGCTACACAAGAACGGGCAACAGTGGAATGGACCAGCGAGGCTGGCAGGACTTAGCTACTTGCAGCCCCATGCTGGCGTTCCCGGTCGAAGGACAACACCACCATCATCAGCCCCATTACGGCCAGCACCCGTCCAGCGCGCTCAGTTACCCGCCCGGGCCCGGCATGTATCACCATCCTCATCACCACCAACACCACCACCAGCACAACAACCACAACAGCAACAACAACACGGGAAACGTGTTATTGCAGAACGTGAGCCTGTGCGCGCCTCCACCGCCACCACCTCCGCCAGCATCCACGTCCATTGACATGGGCGGAGGCCACGCGACCACGTCTTCGTCGTCGTCCCTATCACACTATCATCACCACTCTTCGTCGATCGGTGTGTCGACCAACTGCAATCTTAGTTCAGCCGTTGCCACTTCGCTTCACTTACCCGGCAGTTCATCCGAACAGCCTGCAGCGTTCAAGACAGAACCCCATCAACATGAAATGATGTTTCCCTATCAGAATCACAATAATGAAATGGCTCCTTCATCGGATGGACTTTTGTCGTCGATATTAAACGACGACGACTTGCAGCTTATGGACCCATCGATGGGTGCGGACGGTGGCATGTACCCGGTGCGGATGATGGACACAGCTAGCAGCTCGGTGCCGTGCAACAACACGATGAACACCGCAACCATGGTACAAAACGGTAATGCGGGCGGTGGTGACTCGGACAGCGCCGTTAGTTCAATGGGCTCAGAACGCGTGCCCTCGCTGTCGTCGGACACCGAATGGATGGAAACCAACTCGGACAGTGGACACAATGATGGGTACCCGTCCCATTCCCATCAAGAATATGGAAAAATGAGGTGGTTGGACAATTATCTATATTCCGGAAGTCGTGGTCATTCGGCTGCTCCACAAAAGAAATACCAGTTGTACGGAAGGCGCCTAACAGATCCTGTATCAGGAACCCCGAACGCCACTGAAACGACAAGGCCGAATCACGTTGGTCTAGTGCCCGACTCATTGAACCTGCCGTATGATATGTCCGTCAGGGAAGGCATTCCAGTGCCTGGTTCTTCACAGTTTAACAGACACATGGCTGGTTGTTCACGTGTAATGACACCCGAACACCAAGTGGCTCTCAACCATACGTATGCACTACCTGCCGAAGGTCCCAGGACACCGCGTAACAAGTTCAAGAGCAGTAGTAAGAGGAGCGAAGATGAACAACTAACAAGAGACGAGAAGAGGGCCAGAAATCTGAATATTCCTATCAGCGTCGACGACATAATCAATCTTCCCATGGATGAATTTAACGAGAGGCTGTCCAAGTACGACCTATCTGAAAGTCAGCTGACATTGATTAGAGATATTAGACGTCGAGGAAAAAACAAGGTGGCTGCTCAAAATTGCCGGAAACGTAAGCTGGATCAAATCCTCAGCTTAGCCGATGAAGTAAAACAAATGAAAGACCGAAAGTTCAATTTGTTACAAGAACGTGAATACTTAATGACCGAGCGTATGAGAGTAAAAACCAAATATGATCTACTTTATAACCATATATTTGCAAGTTTAAGAGATCCTGACGGAAATCCGTACTCACCGTATACTCATACGCTGCGTGAGCAGCCGGACGGCAGTGTTAGTATTGTACCCAGAAATAATGGTACCCAAAGCGACCGGAATCCTCGGTCTAAGCAACACAAGGACAAGTAA
- Protein Sequence
- MRHKKKIMLRIKKGFSEQLLQMALLLSLIGYDRLWPTFGIWPSAPSAEIEVGPLDQWGDDSYSNGFGPLTQIHPKSVDRYLDRQWLLNELLSLGRYGDRYPSNIEAYLLNVDGDENGRDDQQQQDSGGQVVKTEPKESDNEDDDVDRVFDTDIVEDVFMLAPEDAELVESLWKVDLDYGLSGATTESRGPSPYNVGSFLLPGDEPPSRNHTFSSPPGSSHGRWYLPPLNTNSSDLSPSSSSFPSRFERTLNSDGNSWEVGSLLVDLRTTGESHSRRVPSDNDTETSDLDADESTEHRNDRSSSNNASPSLTPGSRVKESPWYEPSFEFDFDELESFADMMQCYSQPPPSSRHFQGRMGYTRTGNSGMDQRGWQDLATCSPMLAFPVEGQHHHHQPHYGQHPSSALSYPPGPGMYHHPHHHQHHHQHNNHNSNNNTGNVLLQNVSLCAPPPPPPPPASTSIDMGGGHATTSSSSSLSHYHHHSSSIGVSTNCNLSSAVATSLHLPGSSSEQPAAFKTEPHQHEMMFPYQNHNNEMAPSSDGLLSSILNDDDLQLMDPSMGADGGMYPVRMMDTASSSVPCNNTMNTATMVQNGNAGGGDSDSAVSSMGSERVPSLSSDTEWMETNSDSGHNDGYPSHSHQEYGKMRWLDNYLYSGSRGHSAAPQKKYQLYGRRLTDPVSGTPNATETTRPNHVGLVPDSLNLPYDMSVREGIPVPGSSQFNRHMAGCSRVMTPEHQVALNHTYALPAEGPRTPRNKFKSSSKRSEDEQLTRDEKRARNLNIPISVDDIINLPMDEFNERLSKYDLSESQLTLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVKQMKDRKFNLLQEREYLMTERMRVKTKYDLLYNHIFASLRDPDGNPYSPYTHTLREQPDGSVSIVPRNNGTQSDRNPRSKQHKDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972796;
- 90% Identity
- iTF_01328352;
- 80% Identity
- -