Scyr009125.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza cyrtandrae
Gene Symbol
Mblk-1
Assembly
GCA_035044605.1
Location
JAWNNS010000640.1:8469354-8480121[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-08 7.7e-05 22.4 0.0 2 45 310 354 309 354 0.91
2 2 1.3e-18 1.8e-15 56.4 0.0 1 43 803 846 803 848 0.95

Sequence Information

Coding Sequence
ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAGCCAATTGAATATCGCCGAGCAACAGCCCATATCAATAACAACTTTAGAAACAGAAGACAGCGACTATCAGAAGCCACTAAACCACCGTTTAGCGCAGCCCAACGGAAAacattgcaacaacagcaacggcacaTTGCAATTTGAAGAAGaatttgAGAACAACCACACATCACACGACCACGACTCAAGTGCAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTGAATGCCAAAGGCGAATTAGTGGCCGAAACAACGGCAACCGCGTCTATAAACAATTGTAACAACAACGGCATAGCTGAGCTTCAGCACGACAGTGACAGCAACTCGAGCGCATCACTGCACAATAGCTCCagaaatataaacaacaacaacaataagaacaataataataacaacaacaacaagcatagAGCACGCAACGGAACAAACGCCGCCACGACGTCATCATCAGCGAGTACAATAGAACTTTACAAGCTGTTCACCCAACAAGCAGCTGAAATGACATCGATGGAATCAATGGCCGCCAAACTGGCACAGTTCACAATGATGGCAGATTTCAATTTGATGAGCACGCTGgccaatcaacaacaacaacatgctaACTCGGTAACACCAACTACCTCGGAAGTatctgccgccgccgccagtCCCGCACTAAAAGATACATCCAGTCCCAGTGTGGATGCACCCTTGGATCTAAGCAGCAAACCATCGCCAAATTCATCTATTAGCGGCGATATAAAGACAGCCAGAGCTCTGTCTGAgtgtgccacgcccatttcAGCAGCACGACATAGCTACAGTCATGAGGATCTGAACAGTGCGCTGCAAGATGTGCTGGTCAGTAAACTGGGCTCACGCAAGTCATCCAAGGATTACCATGTGCCGCGTTCCACGCTGCGCAACAAGGTGTGCAAAATGTCGCTTGGTGCAAAGCGACCGAATGCGCAAACGTCGCCcgagctgcaacagcagcaacactacCTGGACCTGGAGCAGGATGAACAGTCTGGTGAGGAGGCTGGCGACGGCGATAGTAATGCTTCAACGCCAGCGCCAGGCTTTCAGGAAATTGCCCAACGCATTGTGGCTAATGAGCATCTGCGCAAGTTGAGCTCCATGTCTGAGCACAATGGCAGCGAGCTGGGCGATGATCTCGATCCCGCCATGTCGCCAAAGTCATCGCGGACGCCACAGCGAGATGGCACACCAACGGGCATGCAAgcggcagcgacagcagcagccgtcgcggcagcaacagctggtagcaacaacaatgccactGGACTGCCAATGCCCATTGATGCCAATGTGCTGTTGCATGCGCTGGTTCTTGCCTCAGGTATTGGTGTCATACCCAAGCTGGACGAGACACAGACGCTGGGTGATCTGTTCAAATCGCTGCTGATGGCCAACAGTGGCGGCATGATAAATGAGACTCTGACATCTGGACACGAGAGCAATGGCAGTGCCACGCTCATCGATCAGCGcctgttgcaacaacagcagcagcagcagcagcaacttaaTGCTGCCTATCGTCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCGCTGGATGCCAATGAGGCGTGCGAGGATCCCATACTGAAGATTCCGTCCTTTAAGGTCAGCGGCGCACCGAGCGTCTCGCCCACCCTgcgttgcaacaacagcagcaacagcatgactaacagcggcaacaacaataacaacaacaacaactcaaacagcagcaatcgcAATGGCGACCACAGTCCACACTCTGCCTCACCAAtgctggcagcagcagttgctgctgcagccgccAACAACAGTTACAGACAgagcggtggcggcggcagcaacagcagcagcaaaaatctGTTGTCGCCATCGCCAACGTCGATACAAAAGATGATGGCCAATACCATACAGCGCAAGATCAATGAGCAAAGCAGCCAGGACAGTCTgcgcaacaatggcaacacaaGCGGCAGcgagtgcagcagcagcggtggcGGCAACAGCAGTGCGAGTCGCAAGCCCAGCATATCGGTGGCCAAAATGATTGGTGGCACAGACACCTCACGTTTTGGAGCATCACCCAATCTGCTATCGCAACAACATCACAGCCATCTGCCACCCGCACATCATCCGGcccaccagcaacagcagcaccattCGCATCAACATTCGCACtcgcatcagcatcagcagcttAGTGCACAGGATGCAGCGGCGCTGGCAGCTGGCAAGGGAACGCGACCGAAGCGTGGTAAGTACCGCAACTACGATAGAGACAGTCTGGTCGAGGCAGTCAAGGCTGTGCAGCGTGGTGAGATGTCTGTGCATCGGGCTGGTAGCTACTATGGTGTGCCGCACTCTACGCTAGAGTACAAGGTAAAGGAGCGACATTTGATGCGACCGCGCAAAAGGGAGCCCAAACCACAACCAGATCTCGTAGGGCTGACTGGAGCAGCGAATAAGATAAGCCTGACCGCCCTGAATAATCTGGAAAAGCTCAAGTCTGGCACCAGCAATAATGCCAACAATAGCTCTAAGCTGAGCAATGCTTTAAAGAACAGTAGCTGCAGTGCtgcaagtgcagcagcagcggcggcagcatcGGTGCCCAATGGCATTAAGTTGCCCATGTTTGATGCCGCACCGCAGTTGTCCTTTCAGCAAAACATGTTCTGGCCACAGCCCAGTGCTGGCGCCAACTATGGCCTGGACTTTAATCGCAATCCCGAATTTATAAAGTCACATATAGCCGAGGTGATGCGCAACAGTCAGCTGGGCGTGGCGAGCAATCATCATGGCCATAGCGGCGCCGCTGGTCACATGAAGAGTGCTCTGGAGTTTGCCGAGAACATGTACGATGGCATCATTCGGAAGACACTGAAGAACGATGTGAACGATTTGAGCGGCAATAGcagtggcaatggcaatggcaatgcgcTGCTGGATCAGTTGCTGGTGAAGAAGACACCGCTGCCATTTACCAATAATCGCAGCAATGACTACCTCGGTGCTGCCTGTTCCACATCCGAGAGCGTTAAACGTTCCGGCAGTCCAATGGGCGCCTATTCAGACGTTAAACGTGAACGTTTCAGTCCGATGCGAAGTGCGGAGAGTGCCAGCAGTGATGATGATCATGAGCAttccaataacaacaacaacaatataaataataatagtgaTCTGGcgcacaacaagaacaataacaacaacagcaccaacaacaataataacggcagcagcagcaacaatggaAATGGCCGCAGCCGAATGACATCACGTGACTCGGATACGGATGCCAGCAGTTTAAAAAGCGAACAATCGCACAGCTCCTTGCCTCCCAATAACAAAATGATGGATCTCAATGGCAGCAACAGTGTCAAATTCGATTCGGAGCCGCAACAGCTAGCACAAATCTCGCCCAGCACCAGCATATTGCATGAGAAGTTGGCGCAGATTAAGGCCGAACAAGCCGAATTGCATGCGGCCAACACCGAGGAGCAGTTATAG
Protein Sequence
MGRRKWKHYQDQLTRSQLNIAEQQPISITTLETEDSDYQKPLNHRLAQPNGKHCNNSNGTLQFEEEFENNHTSHDHDSSATSRSSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTATASINNCNNNGIAELQHDSDSNSSASLHNSSRNINNNNNKNNNNNNNNKHRARNGTNAATTSSSASTIELYKLFTQQAAEMTSMESMAAKLAQFTMMADFNLMSTLANQQQQHANSVTPTTSEVSAAAASPALKDTSSPSVDAPLDLSSKPSPNSSISGDIKTARALSECATPISAARHSYSHEDLNSALQDVLVSKLGSRKSSKDYHVPRSTLRNKVCKMSLGAKRPNAQTSPELQQQQHYLDLEQDEQSGEEAGDGDSNASTPAPGFQEIAQRIVANEHLRKLSSMSEHNGSELGDDLDPAMSPKSSRTPQRDGTPTGMQAAATAAAVAAATAGSNNNATGLPMPIDANVLLHALVLASGIGVIPKLDETQTLGDLFKSLLMANSGGMINETLTSGHESNGSATLIDQRLLQQQQQQQQQLNAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKVSGAPSVSPTLRCNNSSNSMTNSGNNNNNNNNSNSSNRNGDHSPHSASPMLAAAVAAAAANNSYRQSGGGGSNSSSKNLLSPSPTSIQKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLSQQHHSHLPPAHHPAHQQQQHHSHQHSHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLEKLKSGTSNNANNSSKLSNALKNSSCSAASAAAAAAASVPNGIKLPMFDAAPQLSFQQNMFWPQPSAGANYGLDFNRNPEFIKSHIAEVMRNSQLGVASNHHGHSGAAGHMKSALEFAENMYDGIIRKTLKNDVNDLSGNSSGNGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESVKRSGSPMGAYSDVKRERFSPMRSAESASSDDDHEHSNNNNNNINNNSDLAHNKNNNNNSTNNNNNGSSSNNGNGRSRMTSRDSDTDASSLKSEQSHSSLPPNNKMMDLNGSNSVKFDSEPQQLAQISPSTSILHEKLAQIKAEQAELHAANTEEQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00595868;
90% Identity
iTF_01327810; iTF_01320388;
80% Identity
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