Stum005143.1
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- Xbp1
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000444.1:7131108-7132769[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-12 8.4e-10 38.5 6.1 2 40 86 124 86 126 0.95 2 2 3.2e-06 0.0026 17.7 7.2 25 64 123 162 122 163 0.93
Sequence Information
- Coding Sequence
- atggcACCAGCTAACGCAGTGCTTTTAACAAAGATTGTGCCCATCGGCTCTAATACAAATTTGAATCTGAACACATTGCCCAAACTGCGACCAGCGCCTACGCTCTCTGTCGCAGCTGTGCTGCTTAAGGGCGGTGGATCATCGCCGTCCAGTTCGGGCTACGCATCTTCATCCAATAGCATTGCAGACGACGATTCAGTGACAATGGCTGCGCCTACAAAGGCCAAGAAGCGTCGCCTGGATCATCTGTCCTGGGAAGAGAAGGTGCAGAGAAAGAAGCTAAAGAATCGCGTTGCCGCACAGACGAGCCGGGATCGCAAGAAGGCGCGCATGGAGGAAATGGATATAGAAATCAAGGAATTAACTGATAAAGCGGAACTATTGGAAAACAAATGCGAAAGCTTGCAGAGCATCAACGAATCTCTGCtagccaaaaatcaaaaacttgaTACAGAAATGGAACAACTACGACAGGAACTGGCCGAAATGAAAGAGCTTGCCAAGATAAACAGtctcagcaacagcaacaatagcaatcgCTCTGGCGCCAATGCAGGCGCTGAGGGCTGTGCGTCCACATACACTGGATCTGCAGCATCCAATGCTGACCCTCTGCCGCAGGGAGCTGAAGCAGAGCACAACGACAGCATCGCTCTGGAGAATTGTGGCGCTCTGCCTTCTATACAAGACATGTTGCTCGTCGACGATGAAGAGTTCGATGCGCGACGGCTTGAAGAGCTGGCCGAAAGCCTGCTCGCAGATATCGCAGCAGACCTGGAAACAAGCGCTGGCACATGCCACGAAACTGCTGCCCAAGATGCAGGCCAGTCAGAGCGATTGTCTGGATCAATGGTGGGGCCCACAGCAGAGTGCATGGAATCCGGCGGGCATAGAGCTGATGGCCTAAACATGGAGGCAGATGCCAAAGCCAAGGAGTACAGCCAACAAATGCAGGTGTCATCTATAAATAGAAACCAATCAAATAAAGCGAAGACAAcgataaaaaaaccaaatcaaatatcAGCAGCTGCGTTCCTGCAGAGCGCCACAACACCCGACACAGTTTATGGCACCTACGATGCCAAAACAAATTCCATAACCATTGTTATGGATGGAGATGCCGTGCCAGTTAACGAAGCCGTTGAGATCATCTATGGTGATGGTGTCAGTGCTGGCGATGAGAACACTACGGATGCCATCATGAAGTGTCCGTTGCCAGCAACGTCACCCTCACAAGTTTATCTCAACGTCATCAATGCCACCGATGATTCAGATGATGAGGCAACGAGTCATCTTAACTTTGATCCTATTGAGAGATTCCTGTGTCCGCGCGTCAAAGCCATCTCACCGTTGGGCAAATCACCAGCGAGATCTATGCATTCGGTTGCATCGGACCATGGCTATGAGTCGGTTATTGGTTCCCCAGTATCCCAAATGGACACAGTGGAGGCAGCTTTACCAACTGAGGATGACAATGACTTCCCATGGGAGAGTAATTTCGATGATCTATTTCCcagtttaatataa
- Protein Sequence
- MAPANAVLLTKIVPIGSNTNLNLNTLPKLRPAPTLSVAAVLLKGGGSSPSSSGYASSSNSIADDDSVTMAAPTKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMDIEIKELTDKAELLENKCESLQSINESLLAKNQKLDTEMEQLRQELAEMKELAKINSLSNSNNSNRSGANAGAEGCASTYTGSAASNADPLPQGAEAEHNDSIALENCGALPSIQDMLLVDDEEFDARRLEELAESLLADIAADLETSAGTCHETAAQDAGQSERLSGSMVGPTAECMESGGHRADGLNMEADAKAKEYSQQMQVSSINRNQSNKAKTTIKKPNQISAAAFLQSATTPDTVYGTYDAKTNSITIVMDGDAVPVNEAVEIIYGDGVSAGDENTTDAIMKCPLPATSPSQVYLNVINATDDSDDEATSHLNFDPIERFLCPRVKAISPLGKSPARSMHSVASDHGYESVIGSPVSQMDTVEAALPTEDDNDFPWESNFDDLFPSLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01325412; iTF_01320938; iTF_01320219;
- 90% Identity
- iTF_01320938;
- 80% Identity
- -