Scyr013897.1
Basic Information
- Insect
- Scaptomyza cyrtandrae
- Gene Symbol
- Xbp1_1
- Assembly
- GCA_035044605.1
- Location
- JAWNNS010000646.1:14942386-14944032[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-13 8.6e-10 38.6 6.1 2 40 86 124 86 126 0.95 2 2 1.8e-06 0.0018 18.3 7.3 25 64 123 162 122 163 0.94
Sequence Information
- Coding Sequence
- atggcACCAGCTAACGCAGTGCTTTTAACAAAGATTGTGCCCATCGGCTCtaatacaaatttgaatttgagcACATTGCCCAAACTGCGACCAGCGCCTACGCTCTCTGTAACAGCTGTGCTGCTTAAGGGCGGTGGATCATCGCCGTCCAGTTCGGGCTACGCATCTTCATCCAATAGCATTGCAGACGACGATTCAGTGACAATGGCTGCGCCTACAAAGGCCAAGAAGCGTCGCCTGGATCATCTGTCCTGGGAAGAGAAGGTGCAGAGAAAaAAGCTAAAGAATCGCGTTGCCGCACAGACGAGCCGGGATCGCAAGAAGGCGCGCATGGAGGAAATGGATATAGAAATCAAGGAGTTAACTGATAAAACAGAACTATTGGAAAACAAATGCGAAAGCTTGCAGAGCATCAACGAATCTCTGCTAGCCAAGAATCAAAAACTTGATACAGAAATGGAACAACTAAGACAGGAACTGGCCGAAATGAAAGAGCTTGCCAAGATAAACAGtctcagcaacagcaacaatagcaatcgCTCTGGCGCCAATGCAGGCGCTGAGGGCTGTGCGTCCACATACACTGGATCTGCAGCATCCAATGCTGACCCTCTGCCGCAGGGAGCTGAAGCAGAGCACAACGACAGCATCGCTCTGGAGAATTGTGGCGCTCTGCCTTCTATACAAGACATGTTGCTCGTCGACGATGAAGAGTTCGATGCGCGACGGCTTGAAGAGCTGGCCGAAAGCCTGCTCGCAGATATCGCAGCAGACATGGAAACAAGCGATGGCGCATGCCACGAAACTGCTACCCAAGATGCAGGCCAGTCAGAGCGATTGTCTGGATCAATGGTGGGGCCCACAGCAGAGTGCATGGAATCCGGCGGGCATAGAGCTGATGGCCTAAACATGGAGGCGGATGTCAAAGCAAAGGAGTACAGCCAACAAATGCAGGTGTCATCTATAAATGGAAACCAATCAAATAAAGCGACGACaacgataaaaacaaatcaaatatcaGCAGCTGCGTTCCTGCAGAGCGCCACAACACCCGACACAGTTTATGGCACCTACGATGCCAAAACGAATTCCATAACCATTGTTATGGATGGAGATGCCGTGCCAGTTAACGAAGCCGTTGAGATCATCTATAGTGATGGTGTCAGTGCTGGCGATGAGAACACTACGGACGCCATCATGAAGTGTCCGTTGCCAGCAACGTCACCCTCACAAGTTTATCTCAACGTCATCAATGCCACCGATGATTCAGATGATGAGGCAACGAGTCATCTTAACTTTGATCCTATTGAGAGATTCCTGTGTCCGCGCGTCAAAGCCATCTCACCGTTGGGCAAATCACCAGCGAGATCTATGCATTCGGTTGCATCGGACCATGGCTATGAGTCGGTTATTGGTTCGCCAGTATCCCAAATGGACACAGTGGAGGCATCTTTACCAATTGAGGATGACAACGACTTCCCCTGGGAGAGTAATTTCGATGATCTTTTCCCcagtttaatataa
- Protein Sequence
- MAPANAVLLTKIVPIGSNTNLNLSTLPKLRPAPTLSVTAVLLKGGGSSPSSSGYASSSNSIADDDSVTMAAPTKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMDIEIKELTDKTELLENKCESLQSINESLLAKNQKLDTEMEQLRQELAEMKELAKINSLSNSNNSNRSGANAGAEGCASTYTGSAASNADPLPQGAEAEHNDSIALENCGALPSIQDMLLVDDEEFDARRLEELAESLLADIAADMETSDGACHETATQDAGQSERLSGSMVGPTAECMESGGHRADGLNMEADVKAKEYSQQMQVSSINGNQSNKATTTIKTNQISAAAFLQSATTPDTVYGTYDAKTNSITIVMDGDAVPVNEAVEIIYSDGVSAGDENTTDAIMKCPLPATSPSQVYLNVINATDDSDDEATSHLNFDPIERFLCPRVKAISPLGKSPARSMHSVASDHGYESVIGSPVSQMDTVEASLPIEDDNDFPWESNFDDLFPSLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01327634;
- 90% Identity
- iTF_01327634;
- 80% Identity
- -