Scal012713.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- Xbp1
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000934.1:375350-376993[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-14 2e-11 43.6 12.7 2 54 86 138 86 142 0.94 2 2 1.1e-05 0.0098 15.8 6.7 25 64 123 162 122 169 0.95
Sequence Information
- Coding Sequence
- ATGGCACCAGCTAACGGAGTGCTTTTAACAAAGATTGTGCCCATTGGCTctaatttgaatataaatttaaacacattGCCCAAACTGCGACCAGCGCCTGCGATCTCCACCACAGCTGTGCTGCTCAAGGGCGGCGGATCATCACCGTCCAGTTCGGGTTACGCATCATCATCCAATAGCATCGCAGACGACGACTCAGTGACAATGGCAGCGCCCACAAAGGCCAAGAAGCGCCGTCTGGATCATTTGTCCTGGGAGGAAAAGGTGCAGAGAAAGAAGCTTAAGAACCGCGTTGCCGCACAGACGAGCCGGGATCGCAAGAAGGCGCGCATGGAAGAGatggaaatggaaatcaaGGAACTAACAGATAGAACGGAActattgcaaaacaaatgcgaaaGCTTGCAGAGCATCAATGAATCTCTGCTGGCCAAAAATCATAAACTTGATACAGAAATGGAACAACTGCGACAGGAACTGGCCGAAATGAAAGAGCTTGCCAAGAAGAATAGtctcagcaacagcacaagcaacaataGCATTCGCTCTGGCGTCAACGTAGGCGCTGAGGGCTGTGCGTCCACATACACTGGATCTGCAGCATCCAATGCTGACCCTCTGCCGCAGGCTGAAGCAGAGCACAACGACAGCATCGCTCTGGAGAATTGTGGCGCTCTGCCTTCTATACAAGACATGTTGCTCGTCGACGATGAAGAGTTCGATGCGCGACGACTTGAAGAGTTGGCCGAAAGCCTGCTCGCAGATATCGCAGCAGACCTGGAAACAAGCGCTGGCGCATGCCACGAAACTGCTGCCCAAGATGCAGGCCAGTCAGAGCGATTGTCTGGACCAATGGTGGGGCCCACAGCAGAGTGCTTGGAATCCAGCGGGCATAGAGCTGATGGCCTAAATATGGAGGCAAATGCCAAACCAAAGGAGCACAGCCCACAAATACAGGTGTCATCTATAAATGgaagccaacaaaataaagcgaCAACAAATCAACTATCAGCAGCTGCATTCCTGCAAAGCGCCACACCCGATACAGTTTATGGCACCTACGATGCCAAAACGAATTCCATAACCATTGTCATGGATGGAGATGCTGTGCCAGTTAACGAAGCCGTTGAAATCATCTATGGTGATGGCGTCATTGCTGGCGATGAGAACACTACGGATGCAATCATGAAGTGTCCGTTGCCAGCAACGTCACCCTCCCAAGTTTATCTTAACGTCATCAATGCCACCGATGATTCGGATGATGAGGCAACGAGTCACTTGAACTTTGAGCCCATTGAGAGATTCCTGTGTCCGCGCATCAAAGCCATCTCACCGTTGGGCAAATCACCAGCGAGATCCGTGCACTCGATTGCATCGGATCATGGCTATGAGTCGGTTATTGGTTCGCCAGTATCCCAAATGGACACAGTGGAGGCCAACCTAACGACAGAGGATCAGGATGACTTCCCCTGGGAGAGTAATTTCGATGAACTATTTCCCAGCTTAATATAA
- Protein Sequence
- MAPANGVLLTKIVPIGSNLNINLNTLPKLRPAPAISTTAVLLKGGGSSPSSSGYASSSNSIADDDSVTMAAPTKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEMEIKELTDRTELLQNKCESLQSINESLLAKNHKLDTEMEQLRQELAEMKELAKKNSLSNSTSNNSIRSGVNVGAEGCASTYTGSAASNADPLPQAEAEHNDSIALENCGALPSIQDMLLVDDEEFDARRLEELAESLLADIAADLETSAGACHETAAQDAGQSERLSGPMVGPTAECLESSGHRADGLNMEANAKPKEHSPQIQVSSINGSQQNKATTNQLSAAAFLQSATPDTVYGTYDAKTNSITIVMDGDAVPVNEAVEIIYGDGVIAGDENTTDAIMKCPLPATSPSQVYLNVINATDDSDDEATSHLNFEPIERFLCPRIKAISPLGKSPARSVHSIASDHGYESVIGSPVSQMDTVEANLTTEDQDDFPWESNFDELFPSLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01327634;
- 90% Identity
- -
- 80% Identity
- -