Basic Information

Insect: Scaptomyza pallida
Gene Symbol: stc
Assembly: GCA_018152965.1
Location: JAECXP010000039.1:436439-439956[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1.9e+04 -4.1 1.6 15 19 401 405 400 405 0.81

2 15 0.015 1.4e+02 2.7 2.5 4 11 434 441 433 442 0.91

3 15 5.9e-07 0.0055 16.7 15.1 1 19 446 463 446 463 0.93

4 15 1.5 1.4e+04 -3.7 1.1 6 10 489 493 488 493 0.89

5 15 4.4e-08 0.00041 20.4 13.8 1 18 499 516 499 517 0.98

6 15 1.9 1.7e+04 -4.0 1.4 7 13 521 527 521 528 0.72

7 15 5.6e-09 5.2e-05 23.2 11.9 1 19 557 575 557 575 0.98

8 15 1.1 1.1e+04 -3.3 0.5 5 10 605 610 605 610 0.90

9 15 2.4e-05 0.22 11.6 17.0 4 19 623 638 616 638 0.88

10 15 0.06 5.5e+02 0.8 11.6 1 11 678 688 678 700 0.79

11 15 4.8e-10 4.5e-06 26.6 15.5 1 18 705 722 705 723 0.97

12 15 1.2 1.1e+04 -3.4 0.8 6 10 752 756 751 756 0.85

13 15 2 1.9e+04 -6.7 8.5 9 18 769 779 759 780 0.73

14 15 2.1e-08 0.00019 21.4 9.7 1 16 816 831 816 834 0.95

15 15 5.2e-07 0.0048 16.9 13.1 1 19 849 868 849 868 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1.9e+04	-4.1	1.6	15	19	401	405	400	405	0.81
2	15	0.015	1.4e+02	2.7	2.5	4	11	434	441	433	442	0.91
3	15	5.9e-07	0.0055	16.7	15.1	1	19	446	463	446	463	0.93
4	15	1.5	1.4e+04	-3.7	1.1	6	10	489	493	488	493	0.89
5	15	4.4e-08	0.00041	20.4	13.8	1	18	499	516	499	517	0.98
6	15	1.9	1.7e+04	-4.0	1.4	7	13	521	527	521	528	0.72
7	15	5.6e-09	5.2e-05	23.2	11.9	1	19	557	575	557	575	0.98
8	15	1.1	1.1e+04	-3.3	0.5	5	10	605	610	605	610	0.90
9	15	2.4e-05	0.22	11.6	17.0	4	19	623	638	616	638	0.88
10	15	0.06	5.5e+02	0.8	11.6	1	11	678	688	678	700	0.79
11	15	4.8e-10	4.5e-06	26.6	15.5	1	18	705	722	705	723	0.97
12	15	1.2	1.1e+04	-3.4	0.8	6	10	752	756	751	756	0.85
13	15	2	1.9e+04	-6.7	8.5	9	18	769	779	759	780	0.73
14	15	2.1e-08	0.00019	21.4	9.7	1	16	816	831	816	834	0.95
15	15	5.2e-07	0.0048	16.9	13.1	1	19	849	868	849	868	0.96

Sequence Information

Coding Sequence: ATGGCCGAATATTGGCAGCAACAACAACAGCAGCAGCTGCCGTCGGCGCCTCAGCAGCAGCAGCAGCTAACAAATGGAGCGGCAGCGCATAATGACTCAGTCGCTGCCGGTAGCTCTGGCGCTGCCTGCAATGGCACTTCCACTGGCCACACCAACAACAACAACTATGTTAATTTTAATCAGTTCATCACACAACATAATTTACACAGCTCCAACCTCAACTACAACATTGGCGGCGGTGGCGGTGCCTTCGGCCTGACGCCCAACACCAGCAGCACTAGCAGCAGCGGCAGCACTGCCAACAGCGCCAGCAACTCCTCTGGCGCTAACTCGTCCAGCTTTGGTGTCCCACAATATGTGCCGCCTTTATTTAATTATCAAAATGGCGATGGTGCCCAGAACTATCAGGGAGTGGGAGTCGGAGTTGCCGCCGCTGCCTATCCCAACTTGTACTCACCTTTTGGCAATAATCCCTTTGCTGCTGCGCCTGCTGCCGGCTTTGATTTTAGTGCTTCCAAGCTGCAGGCGACCGCACCCGAATTTGTGCCCACTTTTGCCAAGCTCAGCCTGTCGACCAACAATAAAACCAATAGCAACAACAGTAACAACAATAACAACAACACTGCCACACAGCCTGAGACCCTGGCCTATGAGCAGCCAGCCGCAGCTGCTGCCAGCAGCAATAATATACAACAGCACAGGCATCCGAAACCCTTGCTAGCCAGCGGCCAGAGTAGCAACAGTCGCCAGCAGCAGCGACGTCAAGACTATCGCGAAGATCGACACGAGGATCGATATGAGCGGGCGAAGAAGCCGCAGAAGCAACAACGCTATGACAATCATCGCAGCAACAAACGTCGCGACGACTGGAATCGCAATCGCGATCGCATCAATGGCTATCCACGTGCCGCCGACGAACTGGATACCAGCAACAGCAATGACAGTGCTCAAACCTCGCCAGAAAAGCAAACGCAGCAACAACAACAAATCTCGCCACGACGTGCACCAGATAATGAGAAGCTATCGCAGCGAGAGAAGCTCATGCGTGACATTGAGCAGCGACGTCTGGAGTGTTTAGTGTGTGTGGAACAGATAAAGGCTCATCATGGCACCTGGTCATGCACGAACTGCTATCACGTGCTGCATCTCAAGTGCACCATTACGTGGGCAAGCAGCTCCAAGTCTGCAGAGGGTTGGCGTTGTCCCGCCTGCCAAAACGTGCTCGAGGAGGTGCCACGTGAATACTACTGCTTTTGTGGCAAACTCAAGAATCCACCTGTAACACGCAATGAGCTTGCACACACGTGTGGTGAACTGTGCTGTCGCGTGGAGGGATGCAGTCATGCTTGCACGCTGCTGTGCCATCCGGGCCCGTGTCCGCCATGCCAGGCGAATGTGAGTCGCAGTTGCGGCTGTGGACGCACTACCAAGATGATGCAGTGCGCCATTAAACAGCAGCTCCAATGCGAGTCCATCTGCGACAAGGCGCTCAATTGCAGCGAGCATCGTTGCCAGCAGCTCTGTCATGCGGGCAAATGTGAGCCATGTGGCGAGCAGGTGGAGCAAAACTGCCACTGTGGCAAGCAGAAGCGCGAAGTGCTGTGCACCAGGGAGACTCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGCAGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCATGTCATGCCGGCGCCTGTCGTACCTGCAAGCTGAGTCCACAGCAAATCACCAGTTGCCCCTGCGGCAAGCTGCCTGTGCCGCCCACACAACGCGCCAGCTGCCTCGATCCAGTGCCCACCTGCGAGGGCGTCTGCGGCAAGACATTGCGCTGCGGCAAACCCGCTCATCCGCATCAATGCGCCAGCAAATGCCATTTGGGCCAGTGTCCGCCCTGTCCCAAGCAGACGGCTGTCAAATGCCGTTGCGGTCACATGGATCAGCTGATCAAGTGTCGTCAGCTGTCCACACGCGCAGATGATGCGCGCTGCAAGCGTCGTTGCACAAAGAAACGCAGCTGTGGCAAACACAAATGCAATGCCGAATGTTGCATTGATATTGATCATGCCTGCCCGCTGCCCTGTAATCGAACATTGAGCTGTGGCAAACACAAATGCGATCAGCCGTGTCATCGCGGCAATTGCCCGCCCTGCTACCGCAGCAGCTTTGAGGAGCTGTACTGTGAGTGCGGTGCAGAGGTCATCTATCCACCTGTGCCATGTGGCACCAAGCGTCCAGCCTGCAAGCGGCCGTGTTCGCGCACCCATGGCTGTGAGCATGTGCCACAGCATAGTTGTCATGCGGCGGCCGTCTGTCCGCCCTGCATGATGTTCACAACGAAGTGGTGTCATGGCAATCATGAGCAACGCAAAACGATACCCTGCTCCCAGGAGAGCTTTAGCTGTGGCCTTGCGTGCGGCAAGCCGTTGTCGTGCGGTCGCCACAAATGTATTCGACCCTGTCACGAGGGCGAATGTGCACAGCAGCCGGGCGAATTGTGCCGTCAGAGCTGCACCAAGCCGCGTTTGCTGTGCGGCCACAAGTGTGCCGCTGCCTGTCATGAGGGCGCCTGTCCGGAGACACCGTGCAAGGAGCTTGTCGAGGTGCAGTGCGAGTGTGGCAATCGCAAGCAGAGTCGCAGCTGCCAGGAGCTTGCGCGTGAGCATAGTCGCATTGCGACCGCACAGCTGGCCTCGTCCATGGCGGAGATGTCTCGCGGTAACTATATGGAACTCAGCGAAATACTTGCACCAACTAAAACCAACAAATCCAATAAAACCTTGGACTGCAATGAGGAGTGTCGTCTGTTGGAGCGCAATCGTCGCTTGGCTATTGGGTTGCAGTCGCGCAATCCGGAAACGCAGCTTAAGTCGCTGACCAAATATTCAGAATTCATGCGCAGCTTTGCCAAGCGCAATCCAGCTCTAACCAAGAGTGTCTACGAAACACTTACCGATTTGGTCAAGCTGGCCAAGGAGAGCAAGCAAAAGTCACGCAGTCATTCGTTTCCCACAATGAATCGCGAGAAGCGTCAGATGGTGCACGAGTTGTGCGAAGTGTTTGGTGTGGAGTCTGTATCCTATGACAAGGAGCCTAATCGCAATGTGGTCGCCACGGCACATAAGGAACGCTGCTGGTTGCCCGCCACAAGCGTTATGGAGGTTCTTGCACGCGAATCCGGTCAACGTCGTATCCCGGTGCCCAGTAACAATGCCTGGGGTCTCAAAAAGTAG
Protein Sequence: MAEYWQQQQQQQLPSAPQQQQQLTNGAAAHNDSVAAGSSGAACNGTSTGHTNNNNYVNFNQFITQHNLHSSNLNYNIGGGGGAFGLTPNTSSTSSSGSTANSASNSSGANSSSFGVPQYVPPLFNYQNGDGAQNYQGVGVGVAAAAYPNLYSPFGNNPFAAAPAAGFDFSASKLQATAPEFVPTFAKLSLSTNNKTNSNNSNNNNNNTATQPETLAYEQPAAAAASSNNIQQHRHPKPLLASGQSSNSRQQQRRQDYREDRHEDRYERAKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQTSPEKQTQQQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCTNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEEVPREYYCFCGKLKNPPVTRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTTKMMQCAIKQQLQCESICDKALNCSEHRCQQLCHAGKCEPCGEQVEQNCHCGKQKREVLCTRETQDKRSYSCKECCSKPLPCGNHKCKDSCHAGACRTCKLSPQQITSCPCGKLPVPPTQRASCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPACKRPCSRTHGCEHVPQHSCHAAAVCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLACGKPLSCGRHKCIRPCHEGECAQQPGELCRQSCTKPRLLCGHKCAAACHEGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTNKSNKTLDCNEECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFMRSFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRIPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_01323064;
80% Identity: -