Basic Information

Insect: Scaptomyza montana
Gene Symbol: L
Assembly: GCA_018904305.1
Location: JAEIGR010000005.1:2926495-2933834[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.9e-06 0.00076 19.9 2.9 1 23 160 182 160 182 0.98

2 18 0.34 26 5.6 6.2 1 23 188 210 188 210 0.97

3 18 1.6e-07 1.3e-05 25.5 3.2 1 23 216 238 216 238 0.99

4 18 1.2e-05 0.00093 19.6 0.4 1 23 244 266 244 266 0.99

5 18 0.36 27 5.6 0.1 2 23 340 365 339 365 0.92

6 18 0.00013 0.01 16.4 0.7 2 23 398 420 397 420 0.96

7 18 0.027 2 9.1 0.7 1 23 485 507 485 507 0.97

8 18 0.005 0.38 11.4 0.1 2 23 515 536 514 536 0.91

9 18 3.8e-05 0.0029 18.1 0.1 1 23 544 568 544 568 0.94

10 18 5.9 4.5e+02 1.8 0.3 2 20 574 592 573 593 0.91

11 18 5 3.8e+02 2.0 1.6 2 23 604 626 603 626 0.95

12 18 0.0025 0.19 12.4 1.1 1 23 677 700 677 700 0.97

13 18 0.0063 0.48 11.1 1.6 2 23 871 893 870 893 0.96

14 18 0.11 8.6 7.2 0.1 1 23 899 921 899 921 0.92

15 18 0.24 19 6.1 0.4 2 23 929 950 928 950 0.95

16 18 0.39 30 5.5 1.2 1 23 1047 1069 1047 1069 0.94

17 18 0.047 3.6 8.3 0.0 1 23 1079 1101 1079 1101 0.94

18 18 0.0002 0.015 15.8 1.9 1 23 1106 1128 1106 1128 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.9e-06	0.00076	19.9	2.9	1	23	160	182	160	182	0.98
2	18	0.34	26	5.6	6.2	1	23	188	210	188	210	0.97
3	18	1.6e-07	1.3e-05	25.5	3.2	1	23	216	238	216	238	0.99
4	18	1.2e-05	0.00093	19.6	0.4	1	23	244	266	244	266	0.99
5	18	0.36	27	5.6	0.1	2	23	340	365	339	365	0.92
6	18	0.00013	0.01	16.4	0.7	2	23	398	420	397	420	0.96
7	18	0.027	2	9.1	0.7	1	23	485	507	485	507	0.97
8	18	0.005	0.38	11.4	0.1	2	23	515	536	514	536	0.91
9	18	3.8e-05	0.0029	18.1	0.1	1	23	544	568	544	568	0.94
10	18	5.9	4.5e+02	1.8	0.3	2	20	574	592	573	593	0.91
11	18	5	3.8e+02	2.0	1.6	2	23	604	626	603	626	0.95
12	18	0.0025	0.19	12.4	1.1	1	23	677	700	677	700	0.97
13	18	0.0063	0.48	11.1	1.6	2	23	871	893	870	893	0.96
14	18	0.11	8.6	7.2	0.1	1	23	899	921	899	921	0.92
15	18	0.24	19	6.1	0.4	2	23	929	950	928	950	0.95
16	18	0.39	30	5.5	1.2	1	23	1047	1069	1047	1069	0.94
17	18	0.047	3.6	8.3	0.0	1	23	1079	1101	1079	1101	0.94
18	18	0.0002	0.015	15.8	1.9	1	23	1106	1128	1106	1128	0.97

Sequence Information

Coding Sequence: ATGATGGCCTTAAAGATGTTATATCGCGGTCCTAGTTCGCGTTTGGAGAATTTAATTGAAAAGATTCAAGCCACCAAGGAGATAACAAATAACGATATGTACAGCACGCATACCTCCTCGAGCTATTCGCCAAGTATCTCGGATGGCACACTGACACCTAACTCGGTACAGCAGCCAAAGTCCGAGGAACCCCAAACCGAAGAGTCCAAGTCCAAGGCGAATGGTGAAGGTTCTGCTATGGAGCAACAGGACTTACCCAAGCCAAAGAGACCTGCTCATTTGCATCATCACCATCATCATTATCATCATCAGCAGGCGCTGAAAATTGCCAACAAGCTGCGCAAAATCAATAAGGAAGCCAAGTTGGCAGCAGCCGCTGCAGCCGGAGCAGGACATGGAGGTGCAGGCACTGGAGCAGCCGCCAACAAGTTTGATAAGTTGACAAGCGAAAGCATTAAAAGTCGCGGCGACGGCTCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGTCTCGGCTACTTGAAGCACCACGTGCAGAGCCATGCCGAACATTTGCCTTTCAAATGCGAATACTGCGCCAAGTTATTCAAACACAAGCGTTCCCGAGATCGTCATAAGAAGTTGCATACAAACGAAAGGAACTACAAGTGTCCACACTGTGAGGCAGCTTTCTCAAGAAGCGATCATTTAAAGATTCACATGAAGACGCACGATATACAGAAACCCTTTCAGTGCAGCATGTGCAATCGTGGATATAATACAGCTGCCGCTTTAACCTCCCACATGCAGAAGCACAAGAAGAATGCTGCAATCCTGGCAGCTGGGGGTAATCCCAATGCTCTGAACTATAGTCCACGTTCCACGGGTTCTGCCTCGATCTCTAGCAATGGTAGTCTACACAAGCGTCGCTATGCTTTGGCTCTTGCTTCGGATAGCAGTCCAAGTCGTCTGGAGTTCCCGAAGCGGGCACGTGCTGGAGTTGTTCCAACTACGCCTACTCCAACGCCCCTGTTGAGATGCAGTTACTGCAGTCCCAAAGTAATGGAATTCAACAGTCTCGAACAATTGAATGCACACCTTCAGGCGGCACACGAACAGCAGCAGCAGCAGCAACAAGGAGGAAGAAGCTCCGCAACCATAACCAACACCTCTGAAACAGTAGAGCCTCCCACTAATGGTTTTCAGCTCAATTGCGAATATTGTACAATGAAATTTGTCAATATAGCGTCACTTTTTCAGCATATGCGAACAACTCATTTGGATCGTTTGAGCAGTCCAAATTCCTACTATGAACACTTCAATCGTCTGGCAACTGCAGGCACGTTTAGTCCTCGTTTGGAGATGCCAAAAATCAAGCAGGATCTGCCAAGTCCTCCAGCAGAAGAACTTCCGACGGACTTGAGCAGCAATAAACGAAGAACTTTAACACCACCCGCGCCACCTGGCGTCTTCTTTTGCAATCAATGCAATGCAGGGTTGCCAGACTTTGAAAGCTTTCGAAATCATTTGAAAACACACATTGCCGAGGGCATGCAATTGATTTGTCCCCACTGTGGCTTAAGTCTACCGGAACAGTCTGAATTTGAACGTCATGTTGTGGCACATTTTTTAATCACAGGCTCCGAGTTCAATTGTGGCGCCAATTGTGGCAAATCCTTTGCCAAATCGGATGAACTGCAGCAGCATTTGATCAGTGAACATGTTCAGACATTACTAAAGTGTTCCATCTGCTCGGAGTTGTGTGAGAGTCGCATGTCCATGCAACTCCACTTGGCCTGTGCTCATAGTCAGGAGACGAAGCTGCTACGATGCAGTGCGTGCTTGGAACTCTTTCGCAATGATACGGATTTCCATGTGCACGTCAAGACGCGACATCAGCTGGTGGGTGGAGGAGGTGCTTCTGCTGGTCAAGGAGGTGGACCACCGACTGCATCTCCAGCGAATCCCTTGCAGTGCATGTTTTGTCGCGCTGTTTGCGCCTCGGAGTTGGAAATGCATTTCCATTTGGCGGCTCATGCCCGACAATTCCGTTGTCCCAGTTGCCCCGAAACGTTCCATGTGGAGTTTCTACTCGATCGTCATATGCAGAGTCAACATGGTGGTGGTGTCAAGGATAAGCAGGAGCAGTCCACAAATCAGATGGGCAGTCTGTATGTCAATGCTTTGTTGCCACCTTTGGCGGCTGCCGCTGCAGCAGCTGCTGCTGCCACAAATAATAACAGCAATCTGCATATCGATTACAATGTGGCCTTTAAAGGACTTTTTGGGGGAAATGCCACGCCCACAAATGCACAGGCAGCCAACAAGTTCTACAGTCCATTGCAGGTTGATACGAGTGCTTTAAAGCCACAACAAACTCCACATCCTGCACTCATGTACGGCCTCAGTCAACGTTATTTGATGGAGATGTATGCAGCTAAGGCAACTTCCCCAGCAGCCAGCGCACCCGAACTACCGGCACAAGCAACCCAAACAGCGAATGCAACGGCATCCAGCACTGGGAGCAGTTACAGCTGTGGCATGTGTGAGCGTCAGGATTTGCGCAGTGAGGCGGAACTACATTCACATCGGAAACTAGCTCATAATCTGAAGACTGGAGTCAGTTTGCGATGTGCCTACTGCTCAGGCAATTATAAATCTCGTGCGGAACTGGAGCAGCACATGAAGAGCTGTCACAATTCGAGCGGGAAACACAAGTGTCTGATTTGCGATGAGATCTTTCCATCGCCAGCAATACTAGCCGAGCATAAGCTCCAACATTCCAAGGTGGGTCAGTCGGGGAAATGTGCCCATTGTGGCCAGCAGTTGGAGCATGTGGCTGCATTTCGTGCACATCTCGAAGAGCATGGTAATGATGGTAATTTACCAATGGCTTGCATTTGTTGCCGTCAAACTTTACACTCTGAATTTGAATTGAGTTTACACGCAAAGTTCCATACAAAATCTCCAAATTGCGGTAGTCTCCAGGAGCCCGTTTGTGCTTTGTGCTTGGAACCCTTGCCCGAGGCGGGAGAAACTGCTAAATTGTGTGACAAATGCTGCCGCAAACATAATCTCAATGGCAAGCGAAACAAGGAAGGCCCTCCAGTGGTAGCTCCTCAACAACCCGTAGCAACCACAGTGGGATATCTGGAGCATCGTTGTAATCTCTGCAAGCTTATATTGCCACACGCGCAAAAACTCCAGGAGCACCTGGTGGAGCATACGTTTGCTGGTACCGAACAGCGAGGTTTCAATTGCTACATTTGCTCAGCGGTATTTACGGCTCCGGGTGGTCTCCTGGCTCACATTGGTGAGCATGGAGCTCGACCCTACGATTGTAATTTGTGCCCAGAAAAGTTTTTTTTCCGTTCCGAACTCGAGCATCATCAGCGTGCACATGAACTACGTCAAATCTCAGCACCGCCCAATCCGGCTCCTGCGGTACGTCCACCACCCAAACAGGAGAATCACAGCTCCTCGGCCAGCTCACCCATTCTCAGTCCCAGTCATGTGAAGCAGGAGCTTTATGAGTCAGAAACCGCAGCCTCGCCACAACAGCCAGAAGAATTCCCTGCCCAGGATGAGGAGGAGTACATCGAAGTCGAGCAGGTTCCGCATGAAACCCGCTCCAATGAACTGTTATCCGGTGGACAGACCGAACGCTCTAGCAGCAGTGCCTGA
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTLTPNSVQQPKSEEPQTEESKSKANGEGSAMEQQDLPKPKRPAHLHHHHHHYHHQQALKIANKLRKINKEAKLAAAAAAGAGHGGAGTGAAANKFDKLTSESIKSRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASISSNGSLHKRRYALALASDSSPSRLEFPKRARAGVVPTTPTPTPLLRCSYCSPKVMEFNSLEQLNAHLQAAHEQQQQQQQGGRSSATITNTSETVEPPTNGFQLNCEYCTMKFVNIASLFQHMRTTHLDRLSSPNSYYEHFNRLATAGTFSPRLEMPKIKQDLPSPPAEELPTDLSSNKRRTLTPPAPPGVFFCNQCNAGLPDFESFRNHLKTHIAEGMQLICPHCGLSLPEQSEFERHVVAHFLITGSEFNCGANCGKSFAKSDELQQHLISEHVQTLLKCSICSELCESRMSMQLHLACAHSQETKLLRCSACLELFRNDTDFHVHVKTRHQLVGGGGASAGQGGGPPTASPANPLQCMFCRAVCASELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGGVKDKQEQSTNQMGSLYVNALLPPLAAAAAAAAAATNNNSNLHIDYNVAFKGLFGGNATPTNAQAANKFYSPLQVDTSALKPQQTPHPALMYGLSQRYLMEMYAAKATSPAASAPELPAQATQTANATASSTGSSYSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCSGNYKSRAELEQHMKSCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGQQLEHVAAFRAHLEEHGNDGNLPMACICCRQTLHSEFELSLHAKFHTKSPNCGSLQEPVCALCLEPLPEAGETAKLCDKCCRKHNLNGKRNKEGPPVVAPQQPVATTVGYLEHRCNLCKLILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPGGLLAHIGEHGARPYDCNLCPEKFFFRSELEHHQRAHELRQISAPPNPAPAVRPPPKQENHSSSASSPILSPSHVKQELYESETAASPQQPEEFPAQDEEEYIEVEQVPHETRSNELLSGGQTERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01322853;
90% Identity: iTF_01322102;
80% Identity: -