Sgra010578.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- elt-1
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000302.1:354677-357202[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.41 1.2e+03 -1.1 4.3 1 30 346 370 345 375 0.73 2 2 1.8e-17 5.5e-14 51.2 7.7 1 34 397 429 397 431 0.97
Sequence Information
- Coding Sequence
- ATGTCAGAACTGAACGAGACACGTGAAGGCGATCACAACACCAATAATAGCAGCAGTGGAAGTTCAAATTCGGCAACAGAGACTCACATTGAATATCAGCGTAGTTCGCACCACTCACCCCACTACATTCAAATGGCACCGCGCACCGCTGACGAGGTGGCCGAGCAAGTGGCCAATGCGCATCCGGGTACACTGTATGCTTATCCCTCGGGTCAAATCATATGCAGCAGTGATGATGTGGCACCCATTAAAATCGAAACAATTGAAAGCGAAGTGTCGGGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACAGTGTCCGTTATGTTGAGGAGACGCCCGGAGGCAACATGTACTATGAAACGTCCGTTGTGGACGCCAGTGTGCATCCTAATGAGTCCAAGACCTATGCTGATTTGGGCAATGCCTATGCTACCTTTCCGCCCAACTCGACGTTCAGCAGCAATAGTTATGCTGCGGCAGCAACATTGCAGGGCAATACCATCTACAGTGTGCCAGGGACAGCACAATTTATAACCAAATCCGATCCGAACTTGAATCCGTTAAGGCAAACTGCAACGGGACCATATCAGACGATATCCTTTCTAGATGGCACAACTGCTTCTGATGCGGGTCTGTGGACGACGGCTGGTGGGGACTATCAGAATGTATCGTTTGCAAACTATCAAACTCAGGTCATTGACGACTATCCCACGGGCAACATGACGACAGCCCATTGGCCCCCTGCTGGCAGCATTGGAAACTATGATCCTGGACTGGTGGCAACCAGTGCCACACCGCCTTCCACCCATGGCCTGCAGGAGCTGAAGTGTGAGAACTGTCAGACACCATTCATACGCAAGGGCAGCGAGTGGCCCAACTGCCCCAATTGCTATTTGCGCGCTCAGGGTGGACGCCATGTGCCACAACGCCAGAAACCAAAGGCTGCAGCGGCGCCCAACAACCGTCGCAATGGAGTCACCTGCGCCAACTGTCAGACCAACTCGACGACGCTCTGGCGGCGCAACAACGAGGGCAATCCCGTCTGCAATGCCTGTGGTCTCTATTACAAGCTACACAACATGAATCGACCGCTCTCCATGAAGAAGGAAGGCATCCAGAAACGCAAGCGCAAACCAAAGAACAATGGAGGACCTCTACCGCATCGAGTGCTGCCAAGCATGTCACAGGGTGTTAACTTGATGGTGAACAGCGGCATGGTGTATCCATCTCAGGTGGCAGTGGGTTTGCCGAACAGCCAACAAAATGCCAGTCCCGAGTTGCATGACATGTCCACAACTGCTTCCGCTGGCGGACAACGTGTGGTAGCCATTGCGCTTAATCCCACAGTACCGACATCCGATGGTACATTAAACATGTCGCGTCATCATGTGACAAGTGAGAGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACATTTGCCCAACTCCGTAACACTGAGCCGTCAGATTGCACAGTCTGTTCCTCCAATCGAAAGTGGTCGTAGTTCCAATAGCGAGCTGACTCCCACCGTTATAACCCGCACAGGTCTGCCGGAACGATCATCGAATAACTAA
- Protein Sequence
- MSELNETREGDHNTNNSSSGSSNSATETHIEYQRSSHHSPHYIQMAPRTADEVAEQVANAHPGTLYAYPSGQIICSSDDVAPIKIETIESEVSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSVRYVEETPGGNMYYETSVVDASVHPNESKTYADLGNAYATFPPNSTFSSNSYAAAATLQGNTIYSVPGTAQFITKSDPNLNPLRQTATGPYQTISFLDGTTASDAGLWTTAGGDYQNVSFANYQTQVIDDYPTGNMTTAHWPPAGSIGNYDPGLVATSATPPSTHGLQELKCENCQTPFIRKGSEWPNCPNCYLRAQGGRHVPQRQKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGPLPHRVLPSMSQGVNLMVNSGMVYPSQVAVGLPNSQQNASPELHDMSTTASAGGQRVVAIALNPTVPTSDGTLNMSRHHVTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLPNSVTLSRQIAQSVPPIESGRSSNSELTPTVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01324557; iTF_01323771; iTF_01325320; iTF_00553424;
- 90% Identity
- iTF_01324557; iTF_01323771;
- 80% Identity
- -