Smon015075.1
Basic Information
- Insect
- Scaptomyza montana
- Gene Symbol
- Gata6
- Assembly
- GCA_018904305.1
- Location
- JAEIGR010000001.1:4556376-4562684[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.088 2.8e+02 1.3 3.5 1 31 379 404 378 409 0.79 2 2 2.3e-17 7.5e-14 51.1 7.7 1 34 430 462 430 464 0.97
Sequence Information
- Coding Sequence
- ATGGTGTGCAGTAGTATTGATATAGTCGATATCAAGATGCAGCTGAAGGTTCTTCCACGCACACAACAACGACGCATTCTTACAACAGCAGGCACACTAGAACTGAACGAGACAGTTGAAGGTGATCACAGCACCAATAATAGCAGCAGTGGAAGTTCAAATTCGGCAACAGAGACTCACATTGAGTACCAGCGTAGTTCGCACCACTCACCCCACTACATTCAAATGGCACCACGCACCGCTGCCGAGGTGGCCGAGCAAGTGGCAAATGCTCATCCGGGTACACTGTATGCTTATCCCTCGGGTCAAATCATATGCAGCAGTAATAATGTGGCACCCATTAAAATCGAAACAATTGAGAAAAGCGAAGTGTCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTATGTTGAGGAGACGCCCAGTGGCAACATGTACTATGAAACGTCCGTTCTGGACGCCACTGTGCATCCTAATGAGTCAAAGACCTATGCTGATTTGGGCAATGCCTATGCTACCTTTCCGCCCAACTCGACGTTCAGCAGCAATAGTTATGCTGCGGCAGCAACATTGCAGGGCAATACCATATACAGTGTGCCAGGGACAGCACAATTTATAACCAAATCCGATCCGAACTTGAATCCGTTAAGGCAAACCGCAACAGGACCATATCAGACGATATCTTTCCTAGATGGCACAACTGCTGCTGATGCGGGACTGTGGACGACGGCTGGTGGGGATTATCAGAATGTATCCTTTGCAAACTATCAAACACAGGTCATTGACGACTATCCCACGGGAAACATGACGACAGCCCATTGGTCCCCCGCAGGCAGCATTGGCAACTATGATCCTGGACTGGCGGCAACTAGTGCCACACCTCCATCCACCCATGGCCTGCAGGAGCTGAAATGTGAGAATTGTCAGACACCGTTCATGCGCAAGGGCAGCGAGTGGCCCAACTGCCCCAATTGCTTTTTGCGCGCCCAAGGTGGACGCCATGTGCCACAACGCCAGAAACCAAAGGCTACAGCGGCGCCCAACAACCGTCGCAATGGAGTCACCTGTGCCAACTGTCAGACCAACTCGACGACGCTCTGGCGGCGCAACAACGAGGGCAATCCAGTCTGCAATGCCTGTGGTCTCTATTACAAGCTGCACAACATGAATCGGCCGCTCTCCATGAAGAAGGAAGGCATCCAAAAACGCAAGCGCAAACCAAAGAACAATGGAGGGCCTCTACCCCACCGAGTGCTGCCAAGCATGTCTCAGGGTGTTAACTTGATGGTGAACAGCGGCATGGTGTATCCATCTCAGGTGGCAGTGGGTTTGCCGACCAGCCAACAAAATGCCAGTCCCGAGTTGCATGACATGTCCACAACTGGTCCCGCTGGCGGACAACGTGTGGTGGCCATTGCGCTTAATCCCACAGTACCGACATCCGATGGTACATTAAACATGTCGCGTCATCATGTGACAAGTGAGAGCCACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGCCCAACTCCGTAACACTGAACCGTCAGATAGCACAGTCTGTTCCTCCAATCGAAAGTGGCCGTAGTTCCAATAGCGAGCTGACTCCTACCGTTATAACGCGCACAGGTCTGCCGGAACGTTCATCGAATAACTAA
- Protein Sequence
- MVCSSIDIVDIKMQLKVLPRTQQRRILTTAGTLELNETVEGDHSTNNSSSGSSNSATETHIEYQRSSHHSPHYIQMAPRTAAEVAEQVANAHPGTLYAYPSGQIICSSNNVAPIKIETIEKSEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYVEETPSGNMYYETSVLDATVHPNESKTYADLGNAYATFPPNSTFSSNSYAAAATLQGNTIYSVPGTAQFITKSDPNLNPLRQTATGPYQTISFLDGTTAADAGLWTTAGGDYQNVSFANYQTQVIDDYPTGNMTTAHWSPAGSIGNYDPGLAATSATPPSTHGLQELKCENCQTPFMRKGSEWPNCPNCFLRAQGGRHVPQRQKPKATAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGPLPHRVLPSMSQGVNLMVNSGMVYPSQVAVGLPTSQQNASPELHDMSTTGPAGGQRVVAIALNPTVPTSDGTLNMSRHHVTSESHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPNSVTLNRQIAQSVPPIESGRSSNSELTPTVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323047;
- 90% Identity
- iTF_01323047;
- 80% Identity
- -