Shsu000950.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- GATA6
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000073.1:4986635-4989999[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.62 2.4e+03 -1.7 3.5 1 26 391 411 391 420 0.65 2 2 2e-17 7.8e-14 51.1 7.7 1 34 442 474 442 476 0.97
Sequence Information
- Coding Sequence
- ATGAGCCAAGCAAGTGAACCCGATGAACAGCAACACCAACAGACACAATATGTTGTAGTTCCACGCCCACAACAAAGACGCATCCTGACCACAGCGGGCACACTCGAACTAAACGAGACGCGTGAAGGCGATCACAGCACCAATAATAGCAGCAGTGGAAGCTCGAACTCGGCACCAGAGACTCACATTGAGTATCAGCGTAGTTCGCACCACTCACCCCACTACATTCAAATGGCACCACGCACCGCTGCCGAGGTGGCCGAGCAAGTGGCGAATGCGCATCCGGGCACTTTGTATGCCTATCCCTCCGGTCAGATCATATGCAGCAGTGACGATGTGGCGCCGATTAAAATCGAGACAATTGACAAGAGCGAGGTGTCGGGAGAATCGCAGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTACTATGAAGCGTCCGTTGTGGATGCCAGTGTGCATCCCAATGAGTCCAAGACCTATGCAGACTTGGGCAATGCCTATGCCACCTTTCCGCCCAACTCGACGTTCAGCAGCAACAGTTATGCGGCAGCAGCAACATTGCAGGGCAACACCATTTACAGTGTGCCGGGAACAGCACAATTTATAACCAAATCCGATCCGAACCTGAATCCGTTGAGGCAAACCGCAACTGGTCCATACCAGACGATATCCTTCCTAGACGGCACAACTGCCGCCGATGCGGGTCTGTGGACGACTGGTGGCGGGGATTATCAGAATGTGTCCTTTACCAACTATCAAACACAGGTCATTGACGACTATCCCACGGGCAACATGACGGCAGCCCATTGGCCTCCCGCCGGCAGCATTGGCAGCTATGATCCCGGACTGGCAGCAGCCAGTGCCACGCCCCCCTCCACCCATGGCCTGCAGGAGCTGAAGTGTGAGAACTGTCAGACGCCGTTCATACGCAAGGGCAGCGAGTGGCCCAACTGCCCCAATTGCTACATGCGCGCCCAGGGCGGACGTCATGTGCCACAGCGCCAGAAGCCGAAGGCTGCAGCGGCGCCCAACAATCGTCGCAATGGCGTCACCTGCGCCAACTGTCAGACCAACTCGACGACGCTCTGGCGGCGCAACAACGAAGGCAATCCCGTCTGCAATGCCTGCGGTCTGTACTACAAGCTGCACAACATGAATCGACCGCTGTCCATGAAGAAGGAGGGCATCCAGAAACGCAAGCGCAAACCAAAGAACAATGGCGGACCTCTGCCACATCGAGTGCTGCCAAGCATGTCGCAGGGTGTCAACTTGATGGTGAACAGCGGCATGGTGTATCCATCACAGGTGTCAGTGGGTTTGCCCAACAGTCAACAGAACGCCAGTCCCGAGTTGCATGACATGTCCACAACTGGTCCAGCTGGCGGACAGCGTGTGGTGGCCATTGCACTGACGCCGACAGTACCCACATCCGATGGCACATTAAACATGTCGCGTCATCATGTGACGAGTGAGAGTCACTCTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACTCCGTAACACTGAACCGTCAGATTGCACAATCTGTTCCTCCAATCGAAAGTGGTCGCAGTTCCAATAGTGAGCTGACTCCAACCGTTATAACCCGCACTGGTTTGCCGGAACGTTCATCGAATAACTAA
- Protein Sequence
- MSQASEPDEQQHQQTQYVVVPRPQQRRILTTAGTLELNETREGDHSTNNSSSGSSNSAPETHIEYQRSSHHSPHYIQMAPRTAAEVAEQVANAHPGTLYAYPSGQIICSSDDVAPIKIETIDKSEVSGESQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYEASVVDASVHPNESKTYADLGNAYATFPPNSTFSSNSYAAAATLQGNTIYSVPGTAQFITKSDPNLNPLRQTATGPYQTISFLDGTTAADAGLWTTGGGDYQNVSFTNYQTQVIDDYPTGNMTAAHWPPAGSIGSYDPGLAAASATPPSTHGLQELKCENCQTPFIRKGSEWPNCPNCYMRAQGGRHVPQRQKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGPLPHRVLPSMSQGVNLMVNSGMVYPSQVSVGLPNSQQNASPELHDMSTTGPAGGQRVVAIALTPTVPTSDGTLNMSRHHVTSESHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVTLNRQIAQSVPPIESGRSSNSELTPTVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323047;
- 90% Identity
- iTF_01323047;
- 80% Identity
- -