Sfla014687.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza flava
Gene Symbol
stc
Assembly
GCA_003952975.1
Location
RKRM01001684.1:4472-8861[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2.2 1.2e+04 -3.7 0.5 15 18 369 372 368 373 0.79
2 16 3 1.6e+04 -4.1 1.6 15 19 396 400 395 400 0.81
3 16 0.022 1.2e+02 2.7 2.5 4 11 429 436 428 437 0.91
4 16 8.9e-07 0.0048 16.8 15.1 1 19 441 458 441 458 0.93
5 16 2.2 1.2e+04 -3.7 1.1 6 10 484 488 483 488 0.89
6 16 6.5e-08 0.00036 20.4 13.8 1 18 494 511 494 512 0.98
7 16 3 1.6e+04 -6.3 3.9 7 13 516 522 516 523 0.74
8 16 3e-09 1.7e-05 24.6 12.9 1 19 552 570 552 570 0.98
9 16 1.7 9.3e+03 -3.3 0.5 5 10 600 605 600 605 0.90
10 16 4.4e-05 0.24 11.3 17.5 4 19 618 633 611 633 0.88
11 16 0.094 5.1e+02 0.7 11.7 1 11 673 683 673 695 0.79
12 16 7.2e-10 3.9e-06 26.6 15.5 1 18 700 717 700 718 0.97
13 16 3 1.6e+04 -4.2 1.0 6 10 747 751 746 751 0.82
14 16 3 1.6e+04 -5.6 7.4 10 18 765 774 757 775 0.77
15 16 2.6e-08 0.00014 21.7 12.0 1 16 811 826 811 834 0.95
16 16 2.9e-07 0.0016 18.3 12.9 1 19 844 863 844 863 0.97

Sequence Information

Coding Sequence
ATGGCCGAatattggcaacaacaacaaaatcagcagCAACTAACAAATGGAGCGACAGCGCGTAATGACTCAGTCGCTGCCGGTAGCTCTAGCGCTGACTGCAATGGCGCTTTCACTGGCcacattaacaacaataactatgTTAATTTCAATCAGTTCATCACGCAACATAATTTACAAAGTTCCAACCTCAACTATAACATTGGCGGCGGAGGCGGCGCCTTTGGCCTGACGCCCAACAGCAGCCGCGGCAGCACTGGTAACAGCGCCAGCAACACCTCTGGCATAAATTCCTCCAGCTTTGGCGTCGCACAATTTGTGCCGCCTTCATTTGGCTATCAGAATGGCGATGGCGAACAGCATTTTCAagcaggaggaggaggaggagaaggagtctctgccgctgctgctgctgcctatCCCAATTTGTACACACCTTTTGGCAATAATCTATTTGCTGCTGCCCCCACTGGCGGTTATGATTTTAGCGCTTCCAAGCTGCAGGCAACCGCACCCGAATTCGTGCCCAATTTTGCCAAGCTCAGCCTATCgacgacaaacaacaaaagcaacaaaaacaataataactatAACACTGCCACTCAGCCGGAGAGCCTGGCCAATGAGCAGCCAGCACcaagtagcagcaacagcagcatcaatcCTCAGCACCGTCAACTGAAACCGCTGCTGaccagcggcaacagcagtcgccagcagcagcgacgtcaAGATTATCGCGAAGATCGCCACGAGGATCGGTATGAGCGCGCAAAGAagccacaaaagcaacagcgcTACGACAATCATCGCAGCAACAAACGCCGTGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTATCCACGTGCTGCCGACGAACTGGACACCAGCAATAGCAACGATAGCGCTCAAACCTCACCGGAGAagcaaacacaacagcaacaaccacaacaacaacaacaacaaatttcgcCACGACGTGCACCAGACAATGAGAAGCTATCGCAGCGTGAGAAACTAATGCGTGACATTGAACAGCGACGTCTGGAGTGTTTGGTGTGCGTGGAGCAGATCAAAGCACATCATGGCACCTGGTCCTGTCAGAACTGCTATCATGTGCTACATTTGAAATGCACCATTACGTGGGCAAGTAGCTCCAAGTCAGCAGAGGGTTGGCGCTGTCCCGCCTGCCAGAACGTGCTGGAAGAGGTGCCACATGAATACTACTGCTTTTGCGGCAAGCTCAAGAATCCACCATTATCGCGCAATGAGCTAGCCCATACCTGCGGGGAACTATGCTGCCGGGTGGAGGGATGCAGTCATGCCTGCACGCTGCTTTGTCATCCGGGTCCTTGTCCGCCTTGCCAAGCAAATGTGAGTCGCAGCTGCGGCTGTGCACGCACCACCAAGATGATGCAGTGCGCCATGAAACAGCAGCTCCAATGCGAGTCCATCTGCGATAAGTTGCTCAATTGCAGCGAGCACCGCTGCCAGCAGCTCTGCCATGCGGGCAAATGTGAGCCATGTGGCGAGCAGGTGGAGCAACACTGCCACTGTGGCAAGCAGCAGCGCGAGGTGCTGTGCACCAGGGAGACTCAGGACAAGCGCAGTTACTCGTGCAAGGAGTGCTGCGGCAGACCGCTGCCGTGCGGCAATCACAAGTGCAAGGATTCGTGTCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCACAGCAGATCACAAGTTGCCCCTGCGGCAAGCTGCCTGTGCAGCCTGCACAGCGCACCAGTTGCCTCGATCCAGTGCCCACCTGCGAGGGTGTCTGCGGCAAGACTTTGCGCTGCGGCAAACCCGCTCATCCGCATCAATGCACCAGCAAGTGCCACTTGGGCCAGTGCCCTCCATGTCCCAAGCAGACGGCAGTCAAGTGTCGTTGCGGTAATATGGATCAGTTAATCAAGTGCCGGCAGCTGTCAACACGCGCAGATGATGCACGCTGCAAGCGTCGCTGCACTAAGAAGCGCAGCTGTGGCAAACACAAATGCAATGCGGAATGCTGCATCGATATCGACCATGCCTGCCCGCTGCCCTGCAATCGAACGTTGAGCTGTGGCAAACACAAATGCGATCAGCCGTGTCATCGCGGCAATTGTCCGCCTTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGTGCAGAGGTTATCTATCCACCTGTGCCATGTGGCACCAAGCGTCCACCCTGCAAGCGTACCTGTTCGCGCACCCATGGCTGCGATCATGTGCCACAACATAGTTGCCATGCGGCTGCCATCTGTCCGCCCTGCATGATGTTCACGACCAAGTGGTGTCATGGCAATCATGAGCAGCGCAAAACTATACCCTGCTCCCAAGAGAGCTTCAGCTGTGGCTTTGCATGCGGCAAGGCGCTAGCCTGCGGTCGCCACAAGTGCATTCGGCCCTGCCACGAGGGAGACTGTCAACAGCAGCCGGGTGAATTGTGCCGTCAAAGCTGCACCAAGCCGCGTTTGCTGTGCGGCCATAAGTGTGCCGCTGCCTGCCATGAGGGCGACTGTCCGGATACACCGTGCAAGGAGCTTGTCGAGGTGCAGTGCGAGTGTGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGTTCGGGAGCATAGTCGCATTGCCACCGCACAGCTGGCCTCCTCCATGGCGGAGATGTCGCGTGGAAACTATATGGAACTCAGCGAAATTCTTGCACCCACcaaaaccaataaatccaATAAAACCTTGGACTGCAATGATGAGTGTCGTCTGTTGGAGCGCAATCGTCGCTTGGCTATCGGACTGCAGTCCCGCAATCCGGAGACACAGCTTAAATCGCTGACCAAATATTCGGAATTTATGCGCGGCTTTGCCAAACGCAATCCGGCACTCACCAAGAGTGTCTACGAAACGCTTACCGATTTGGTTAAGTTGGCCAAGGAGAGCAAACAGAAGTCACGCAGTCATTCTTTTCCCACCATGAATCGCGAAAAGCGTCAAATGGTGCACGAGTTGTGCGAAGTGTTTGGCGTAGAGTCCGTATCCTATGACAAGGAGCCCAATCGCAATGTAGTCGCCACAGCACACAAGGAACGTTGCTGGTTGCCCGCAACAAGCGTTATGGAGGTACTTGCACGCGAATCCGGTCAACGTCGCGTCCCGGTACCGAGCAACAATGCTTGGGGCCTCAAAAAGTAG
Protein Sequence
MAEYWQQQQNQQQLTNGATARNDSVAAGSSSADCNGAFTGHINNNNYVNFNQFITQHNLQSSNLNYNIGGGGGAFGLTPNSSRGSTGNSASNTSGINSSSFGVAQFVPPSFGYQNGDGEQHFQAGGGGGEGVSAAAAAAYPNLYTPFGNNLFAAAPTGGYDFSASKLQATAPEFVPNFAKLSLSTTNNKSNKNNNNYNTATQPESLANEQPAPSSSNSSINPQHRQLKPLLTSGNSSRQQQRRQDYREDRHEDRYERAKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQTSPEKQTQQQQPQQQQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEEVPHEYYCFCGKLKNPPLSRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCARTTKMMQCAMKQQLQCESICDKLLNCSEHRCQQLCHAGKCEPCGEQVEQHCHCGKQQREVLCTRETQDKRSYSCKECCGRPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLPVQPAQRTSCLDPVPTCEGVCGKTLRCGKPAHPHQCTSKCHLGQCPPCPKQTAVKCRCGNMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRTCSRTHGCDHVPQHSCHAAAICPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGFACGKALACGRHKCIRPCHEGDCQQQPGELCRQSCTKPRLLCGHKCAAACHEGDCPDTPCKELVEVQCECGNRKQSRSCQELVREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTNKSNKTLDCNDECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFMRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00472738;
90% Identity
iTF_01323064;
80% Identity
iTF_01322322;