Basic Information

Insect: Sarcophaga subvicina
Gene Symbol: -
Assembly: GCA_936440885.2
Location: CAKZFJ020000156.1:2338312-2344096[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.58 60 5.3 1.5 1 23 238 261 238 261 0.86

2 27 0.00011 0.011 17.0 1.2 1 23 267 290 267 290 0.97

3 27 0.1 10 7.7 1.2 1 23 362 385 362 385 0.91

4 27 2.4e-05 0.0025 19.1 1.1 1 23 391 414 391 414 0.97

5 27 0.00012 0.012 16.9 1.5 2 23 445 466 444 466 0.96

6 27 0.011 1.1 10.7 1.2 1 23 543 566 543 566 0.96

7 27 0.012 1.2 10.6 3.1 1 23 573 595 573 595 0.99

8 27 0.00053 0.055 14.9 0.8 1 23 638 660 638 660 0.98

9 27 0.012 1.3 10.5 0.2 2 20 673 691 672 694 0.92

10 27 0.0032 0.33 12.4 0.9 1 23 774 797 774 797 0.93

11 27 0.034 3.5 9.2 0.2 1 20 804 823 804 825 0.95

12 27 0.39 40 5.8 0.3 2 23 837 859 836 859 0.94

13 27 0.0017 0.18 13.2 0.4 2 23 874 895 873 895 0.97

14 27 3.1e-06 0.00032 21.9 2.0 1 23 901 923 901 923 0.98

15 27 0.037 3.8 9.1 2.1 1 23 1070 1094 1070 1094 0.97

16 27 9.8 1e+03 1.4 2.1 1 23 1131 1154 1131 1154 0.91

17 27 0.0011 0.12 13.8 1.0 2 23 1169 1191 1168 1191 0.95

18 27 0.0056 0.58 11.6 3.6 1 23 1198 1220 1198 1220 0.96

19 27 0.003 0.31 12.5 0.2 2 19 1247 1264 1246 1266 0.94

20 27 4.8e-05 0.005 18.1 1.5 1 23 1324 1347 1324 1347 0.98

21 27 0.028 2.9 9.4 0.8 1 23 1384 1407 1384 1407 0.95

22 27 0.1 11 7.7 6.1 1 23 1441 1464 1441 1464 0.97

23 27 4.8e-07 5e-05 24.4 0.7 1 23 1490 1512 1490 1512 0.96

24 27 5.6e-06 0.00058 21.1 0.3 1 23 1518 1540 1518 1540 0.99

25 27 1.1e-05 0.0012 20.1 4.7 1 23 1546 1568 1546 1568 0.98

26 27 1.9e-06 0.00019 22.6 2.6 1 23 1574 1596 1574 1596 0.99

27 27 0.099 10 7.7 0.7 1 22 1602 1623 1602 1626 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.58	60	5.3	1.5	1	23	238	261	238	261	0.86
2	27	0.00011	0.011	17.0	1.2	1	23	267	290	267	290	0.97
3	27	0.1	10	7.7	1.2	1	23	362	385	362	385	0.91
4	27	2.4e-05	0.0025	19.1	1.1	1	23	391	414	391	414	0.97
5	27	0.00012	0.012	16.9	1.5	2	23	445	466	444	466	0.96
6	27	0.011	1.1	10.7	1.2	1	23	543	566	543	566	0.96
7	27	0.012	1.2	10.6	3.1	1	23	573	595	573	595	0.99
8	27	0.00053	0.055	14.9	0.8	1	23	638	660	638	660	0.98
9	27	0.012	1.3	10.5	0.2	2	20	673	691	672	694	0.92
10	27	0.0032	0.33	12.4	0.9	1	23	774	797	774	797	0.93
11	27	0.034	3.5	9.2	0.2	1	20	804	823	804	825	0.95
12	27	0.39	40	5.8	0.3	2	23	837	859	836	859	0.94
13	27	0.0017	0.18	13.2	0.4	2	23	874	895	873	895	0.97
14	27	3.1e-06	0.00032	21.9	2.0	1	23	901	923	901	923	0.98
15	27	0.037	3.8	9.1	2.1	1	23	1070	1094	1070	1094	0.97
16	27	9.8	1e+03	1.4	2.1	1	23	1131	1154	1131	1154	0.91
17	27	0.0011	0.12	13.8	1.0	2	23	1169	1191	1168	1191	0.95
18	27	0.0056	0.58	11.6	3.6	1	23	1198	1220	1198	1220	0.96
19	27	0.003	0.31	12.5	0.2	2	19	1247	1264	1246	1266	0.94
20	27	4.8e-05	0.005	18.1	1.5	1	23	1324	1347	1324	1347	0.98
21	27	0.028	2.9	9.4	0.8	1	23	1384	1407	1384	1407	0.95
22	27	0.1	11	7.7	6.1	1	23	1441	1464	1441	1464	0.97
23	27	4.8e-07	5e-05	24.4	0.7	1	23	1490	1512	1490	1512	0.96
24	27	5.6e-06	0.00058	21.1	0.3	1	23	1518	1540	1518	1540	0.99
25	27	1.1e-05	0.0012	20.1	4.7	1	23	1546	1568	1546	1568	0.98
26	27	1.9e-06	0.00019	22.6	2.6	1	23	1574	1596	1574	1596	0.99
27	27	0.099	10	7.7	0.7	1	22	1602	1623	1602	1626	0.88

Sequence Information

Coding Sequence: ATGGACAACTCTAATGTTAAGGAATGTTTTATTAATGGAATACCCTACAAATGTCGTACGTGCTTTGATCCTGGAGCAACTGTCTGCTCCTTGAATGAGGAGTTCAAAAGTGCAAAGACCTGGCGAGATTTATTAAAGGATGTGGGACAATTAAAGACAACTCATGACGATTCGTTACCGAAGACTATGTGCTGTGTGTGTTCGGAGAAGCTCAAAAGTTCCTATGACTTTCTGCGGCAAATTCATAgcgtaaatagaaaatttctaaaGCTATTGGGAAAATCAGAAGATCCGCTACAGGATGGTTTTCAAAGTGATGTTGAACAATTTTCCGATTGCTTGGAGGAGTCAACCATTGACTTACCATTGGAACAGTATATAccagaaataaaattagaagatGACTTAGAGAGCACCCACACAAAGTTGGAAGACGAAGaaaaccaaaattatttttcggAAAAGGAAGTGATTAAATCTGACTCTGAACATTCTgatgacaacaaaaaatataaaagaaggtCTTCTAAGGCACAATCGAATAGCAATGATGATGTTAGCGAAGAGAAcACCTCATCGGATGAGAGTGACTATAGACGAAGCAAGCGGTTAAGGAAAGAAAGTaacagcattaaaaataaaaattgtggaaaTAGAAAGGGACGTAAAGCACCGGATTATtatgataaaattgaaaagGTTGGCGATCGTTTTGTTTGCCTTTTATGTCAAAAGTCCTTTTCATTAAGAAAAGATTGTGGACGACATATTGTTTCAATACATGTTCGTCCTATTTTATTCTCCTGTGAATTTTGTGGCCAAGGTTTTAGTCGTAAAGATAAAATTCAACAGCACATTAAACGCATGCATCCTGTCATACCCTCGGATTATCTCGATGATAACTGTAATGACAATGTCTATGATAATGAAGAGAActCTTCTTCCGATGAAAGTGATTATAGATCAACCAAGCGGTTAAAGAAGGAAAGTAAtcgaattataaacaaaaaTCAGCCCGTCAAGCGTAGAAAGGGAAGACAGGCTCCagattattttgataaaattgaaaagatcgatgatcgttttgtttgtttaatctGCCAGAAGTCATTTTCGTTGAGAAAAGATTGCGGCCGCCATATTGCCTCAATACATTTGCGCCAAATCATCTTTCCGTGTGAATTTTGTGGTCAAAGTTTTAGTCGTAAGGATAAAATACAACAGCACATTAAACGTATGCACTCTGACAGACCCTTTTACCCGAAATCCAAACAAAAGGAGTTTCTATTTGGTGATCGTTTGTACAGCCAACCAACAAAGTGGCATCTGGTCGAATGTAAATTGTGTAATACAACTTTTAGCACAACTAAAGACCTCAGAAAGCACTTGTTACAGCACAGCAGCATAGATACTCTTGATAATTTAGATTCAAACAGTCAAATTGTTCaacatttatttgcaaatacaaacgatttaaatacaataaaagaaagtatATGCCGTGACATCCACGAGAAGCAATGGTTTAAATACTACAATGTATTAAATGAGTATTCATTTGAAATGTCCATTACTGATACGGAGGTAGAAGATTTGGAAGATGATGCCATACAGTCCAATAGCAAATATAAATGTGAGCTGTGTAatcaacaattttcatttaaatttcaagcTTTTGCTCACTTAAAAGAAGCTCATCTAGAAGCTGATATACCCTATAAATGTGGTTTATGCAAAATGGAGTTTATATCATTAAAAATGTTCGAACATCATAGTCGAACACATTGTCGGAATAGACACAAAATATTGCTGTGCACAAGCTGTCCAGCGAAATTTGTCTGGcccgaaaatatgaaaaatcacAATTGTGCCGCTAAAGTTGTAGTACCCACGACCAcagataagaaaatttttacatgtAATATATGCGATCGGGTATATGAGGTAAagactaaatatgaaaaacatttagaaTCCCATAAAGATGGCAGCATAGCATCgacaaaaactataataaaatgtGGTCTTTGCATAAAATCCTTTGAAAGGCTCTCACAGCTACGGGAACACATGCCTGTACATGCCGACGGCAAAACTGGTATCGATTTTAAAGGCAGCATTTATATAAAACGGTTTGAACGTTCAAAAACTCTGGATTATGCCCTGATGCAGCAGGAGATACAAAACGCTTACAGAAAATCTCAAATTAGCCGTTTCTATCGCGCTATGGACAGAGATGGCAATGAAATGGATATTTTAGATTCAGATTCCGATGAAGAAGAtgctgaaatttttaataaacagaaaataaaaaaggaatacaaatgTGAACTTTGTAGCGAAATATACAAAAGACGCAAACTTCTGCTAAATCATCAGTTTGAAATACACAATGATGTGCCTCTGCCATACACTTGTGATTCCTGTACTCAACAGTATGTCAGCAATGATTTATTACAGCAGCATTTGGTTAGAGATTGTTGGAACGAACACCGCCGTGTTGCTCAGCAATGTGAATTTTGTAATGCGCGTTTTATATGGccaaataatcttttaaaacataaagaaatacaGCACAAACATCAAAAGCATCCCCGACCTCAAAGAGCCAGTACGCTCAAGtgtgaattttgtgaaaaagtCTTCATATGGCCCAAAGATCTGGTACGACATCGAAAAACCCATACGGAAGGCAAACGATTCTCTTGTCCTCATTGTGAACGTAAGTTTCAACGCAAGGATAACTTATTGGCTCATATTCGGTTACATGACCCCGAAAGCCTATCCATCATTTTAAACTCAAACAGAACTGTAGACTATATACTGCCACATCTATTGAAGCCTCATGGTTGCAAACAAATCAAATGCATGATCTGCTATTCAGAACACATTCGTCTACGCGATTTACGTTCCCATTTAAGATCACATCGTTACAGcattaatttcgaaaaaagaaaagaaactgaaaCTCTTGACACCATATCAGCACAATTGTATCCAGACGAAACGGACATGTGTGAAGAAGATTTAATAAAACGTATTGGAACAGACATTGCTGCTGAAAATAATTTGGAACGTTTTTACTccataacaaatgaaaatggTTATGAAGTGAATTTGGATAGTTCAGAAACGGAGAGCGATTCAGATGACAATGAcaatgatgaaaatgatgacgATAACATGGAGGATAAACCGAAACGTCTTTATAAATGTGATTTATGTCCCACAATTAGTTTTAATcgcaaatttaaactttttgaacatcaaaataaaaatcatacttGGGAAGAGGCTCGCCATATTTGCATACACTGCAACAGTCGTTTCCTATCCTCCTATATGTTGCAGTTACACTACAAGAATCAatgtaaaaatacaaaaaaacgaCATTTCTGTCGTCGTTGTCCGCTGCGTTTCATGTGGAAAAATAaccttaaaattcatttcataatgGAACATGGCCAAGAGCTAACCAAAGATGCTGATTCAATAAGACGCACTGAATGTTTTCTATGCCAGGAGAAATTCAGTAATCAATGGGAAGTCAAACGCCATATGAATCAATCTCATTCTGATGATCCTGATGTTCATTATTGTCTCTTATGCCCGAAAACATTTTACAGCATTGAACATCTTAATGAACATTTAACACGTCATCGTATTACCAAGACTGACATTAAAACAGTTGAGAGCATAATACATTCCACTTGCTGGCCAAATAGCGATAAAATTATCAAATGTAAATTATGTGGTCAAACATTTGATACCATGGCCAacttaaatgaacatttttcacCCTTGTATCCACAAAACTTGTGTGCTACACAACATTCCCTCGCcaattattcgataacaaatCAAAAAGGTTTTGAATTGCATTTAGAAATGGATTCAGAAACAGAAATAGAAGACGAAATTGACACTGGTGGTCAACAGAATAAAGAACACAAGTTGAAACTACATCCCTACACTTGTTCCTTGTGCGATATATCGTACAGACGAAAATATCAAATGGCTCAGCACCAACGTTCCATGCACAATTATGAAGGTCTAGCTTTAAAATGTGAACGATGCATATTTCGAACTGTGTGTCAGaaaattttagtttatcACCAGACTACACAATGTTTTAATGAAGAAAAGCAATACGAATGTAGTgattgcaaatttaaatttatgtggcAGGAAAATCTCAATAATCATGTGTCCATATTTCATTCACCAAAGGATAAATGCCCGGAAGAAGAGAATATTATTGAAGCAAAAGCTACAAGTAAAGTTGTGCCACCGccgaataataaaaatgatccCCATATTTTCGAATGCATGGACTGTCACCGTCGCTACAATCGTAGGGATCGTTATAAGGCACATTTTAAAAAGTTCCACTCTAATGACACGCAACTAACGACTGGCACTAATATAAAAATACGCAAAAAGGGTATATCGAAGTCAGAAAAGAAATATCTCTGTGCCTTTTGCGGCCTATCCTTTTCGAATAATTCAAATCTTACAGTTCATATGCGACGTCATACCGGTGAAAAACCGTTTAAATGTGATCTTTGCGATATGGCCTTTCCACGTTCCTCTGATGTGCAAGCTCATCGACGAACTCATACCGGTGAACGTCCATTTAAGTGTATGCATTGTGATAAATCATTTTCCCGACAATATAAACTAAATGTACACAATCGCATACACACTGGCGAGCGTCCTTACAAGTGTACATATTGCACGAAATCCTTTATACAATCGAATGATTTGACCTTACATTTGCGTCGTCATACGGGCGAAAGACCTTACTTGTGCGACATTTGTGGTGAAGGATTCATATGTGCCACCTCATTGAAACAGCATCGCAACTCTAAAGGCCACCAGGACGATAAAAGCATTGATTTGAAGCATTGTATGCAACAATTAACACAATTcgatatgaaattctaa
Protein Sequence: MDNSNVKECFINGIPYKCRTCFDPGATVCSLNEEFKSAKTWRDLLKDVGQLKTTHDDSLPKTMCCVCSEKLKSSYDFLRQIHSVNRKFLKLLGKSEDPLQDGFQSDVEQFSDCLEESTIDLPLEQYIPEIKLEDDLESTHTKLEDEENQNYFSEKEVIKSDSEHSDDNKKYKRRSSKAQSNSNDDVSEENTSSDESDYRRSKRLRKESNSIKNKNCGNRKGRKAPDYYDKIEKVGDRFVCLLCQKSFSLRKDCGRHIVSIHVRPILFSCEFCGQGFSRKDKIQQHIKRMHPVIPSDYLDDNCNDNVYDNEENSSSDESDYRSTKRLKKESNRIINKNQPVKRRKGRQAPDYFDKIEKIDDRFVCLICQKSFSLRKDCGRHIASIHLRQIIFPCEFCGQSFSRKDKIQQHIKRMHSDRPFYPKSKQKEFLFGDRLYSQPTKWHLVECKLCNTTFSTTKDLRKHLLQHSSIDTLDNLDSNSQIVQHLFANTNDLNTIKESICRDIHEKQWFKYYNVLNEYSFEMSITDTEVEDLEDDAIQSNSKYKCELCNQQFSFKFQAFAHLKEAHLEADIPYKCGLCKMEFISLKMFEHHSRTHCRNRHKILLCTSCPAKFVWPENMKNHNCAAKVVVPTTTDKKIFTCNICDRVYEVKTKYEKHLESHKDGSIASTKTIIKCGLCIKSFERLSQLREHMPVHADGKTGIDFKGSIYIKRFERSKTLDYALMQQEIQNAYRKSQISRFYRAMDRDGNEMDILDSDSDEEDAEIFNKQKIKKEYKCELCSEIYKRRKLLLNHQFEIHNDVPLPYTCDSCTQQYVSNDLLQQHLVRDCWNEHRRVAQQCEFCNARFIWPNNLLKHKEIQHKHQKHPRPQRASTLKCEFCEKVFIWPKDLVRHRKTHTEGKRFSCPHCERKFQRKDNLLAHIRLHDPESLSIILNSNRTVDYILPHLLKPHGCKQIKCMICYSEHIRLRDLRSHLRSHRYSINFEKRKETETLDTISAQLYPDETDMCEEDLIKRIGTDIAAENNLERFYSITNENGYEVNLDSSETESDSDDNDNDENDDDNMEDKPKRLYKCDLCPTISFNRKFKLFEHQNKNHTWEEARHICIHCNSRFLSSYMLQLHYKNQCKNTKKRHFCRRCPLRFMWKNNLKIHFIMEHGQELTKDADSIRRTECFLCQEKFSNQWEVKRHMNQSHSDDPDVHYCLLCPKTFYSIEHLNEHLTRHRITKTDIKTVESIIHSTCWPNSDKIIKCKLCGQTFDTMANLNEHFSPLYPQNLCATQHSLANYSITNQKGFELHLEMDSETEIEDEIDTGGQQNKEHKLKLHPYTCSLCDISYRRKYQMAQHQRSMHNYEGLALKCERCIFRTVCQKILVYHQTTQCFNEEKQYECSDCKFKFMWQENLNNHVSIFHSPKDKCPEEENIIEAKATSKVVPPPNNKNDPHIFECMDCHRRYNRRDRYKAHFKKFHSNDTQLTTGTNIKIRKKGISKSEKKYLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCDMAFPRSSDVQAHRRTHTGERPFKCMHCDKSFSRQYKLNVHNRIHTGERPYKCTYCTKSFIQSNDLTLHLRRHTGERPYLCDICGEGFICATSLKQHRNSKGHQDDKSIDLKHCMQQLTQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01314003; iTF_01314832;
90% Identity: iTF_01314832;
80% Identity: -