Basic Information

Insect: Sarcophaga carnaria
Gene Symbol: -
Assembly: GCA_958299815.1
Location: OY283149.1:156361867-156367653[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.62 66 5.3 1.5 1 23 233 256 233 256 0.86

2 26 0.00012 0.012 17.0 1.2 1 23 262 285 262 285 0.97

3 26 0.11 11 7.7 1.2 1 23 357 380 357 380 0.91

4 26 2.6e-05 0.0027 19.1 1.1 1 23 386 409 386 409 0.97

5 26 0.00013 0.014 16.9 1.5 2 23 440 461 439 461 0.96

6 26 0.012 1.2 10.7 1.2 1 23 538 561 538 561 0.96

7 26 0.01 1.1 10.9 3.1 1 23 568 590 568 590 0.99

8 26 0.00056 0.06 14.9 0.8 1 23 633 655 633 655 0.98

9 26 0.013 1.4 10.5 0.2 2 20 668 686 667 689 0.92

10 26 0.0035 0.36 12.4 0.9 1 23 769 792 769 792 0.93

11 26 0.036 3.8 9.2 0.2 1 20 799 818 799 820 0.95

12 26 0.42 44 5.8 0.3 2 23 832 854 831 854 0.94

13 26 0.0019 0.2 13.2 0.4 2 23 869 890 868 890 0.97

14 26 3.3e-06 0.00035 21.9 2.0 1 23 896 918 896 918 0.98

15 26 0.04 4.2 9.1 2.1 1 23 1065 1089 1065 1089 0.97

16 26 0.0012 0.13 13.8 1.0 2 23 1164 1186 1163 1186 0.95

17 26 0.006 0.63 11.6 3.6 1 23 1193 1215 1193 1215 0.96

18 26 0.0033 0.34 12.5 0.2 2 19 1242 1259 1241 1261 0.94

19 26 5.2e-05 0.0054 18.1 1.5 1 23 1319 1342 1319 1342 0.98

20 26 0.03 3.2 9.4 0.4 1 23 1379 1402 1379 1402 0.95

21 26 0.11 11 7.7 6.1 1 23 1436 1459 1436 1459 0.97

22 26 5.2e-07 5.4e-05 24.4 0.7 1 23 1485 1507 1485 1507 0.96

23 26 6e-06 0.00064 21.1 0.3 1 23 1513 1535 1513 1535 0.99

24 26 1.2e-05 0.0013 20.1 4.7 1 23 1541 1563 1541 1563 0.98

25 26 2e-06 0.00021 22.6 2.6 1 23 1569 1591 1569 1591 0.99

26 26 0.11 11 7.7 0.7 1 22 1597 1618 1597 1621 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.62	66	5.3	1.5	1	23	233	256	233	256	0.86
2	26	0.00012	0.012	17.0	1.2	1	23	262	285	262	285	0.97
3	26	0.11	11	7.7	1.2	1	23	357	380	357	380	0.91
4	26	2.6e-05	0.0027	19.1	1.1	1	23	386	409	386	409	0.97
5	26	0.00013	0.014	16.9	1.5	2	23	440	461	439	461	0.96
6	26	0.012	1.2	10.7	1.2	1	23	538	561	538	561	0.96
7	26	0.01	1.1	10.9	3.1	1	23	568	590	568	590	0.99
8	26	0.00056	0.06	14.9	0.8	1	23	633	655	633	655	0.98
9	26	0.013	1.4	10.5	0.2	2	20	668	686	667	689	0.92
10	26	0.0035	0.36	12.4	0.9	1	23	769	792	769	792	0.93
11	26	0.036	3.8	9.2	0.2	1	20	799	818	799	820	0.95
12	26	0.42	44	5.8	0.3	2	23	832	854	831	854	0.94
13	26	0.0019	0.2	13.2	0.4	2	23	869	890	868	890	0.97
14	26	3.3e-06	0.00035	21.9	2.0	1	23	896	918	896	918	0.98
15	26	0.04	4.2	9.1	2.1	1	23	1065	1089	1065	1089	0.97
16	26	0.0012	0.13	13.8	1.0	2	23	1164	1186	1163	1186	0.95
17	26	0.006	0.63	11.6	3.6	1	23	1193	1215	1193	1215	0.96
18	26	0.0033	0.34	12.5	0.2	2	19	1242	1259	1241	1261	0.94
19	26	5.2e-05	0.0054	18.1	1.5	1	23	1319	1342	1319	1342	0.98
20	26	0.03	3.2	9.4	0.4	1	23	1379	1402	1379	1402	0.95
21	26	0.11	11	7.7	6.1	1	23	1436	1459	1436	1459	0.97
22	26	5.2e-07	5.4e-05	24.4	0.7	1	23	1485	1507	1485	1507	0.96
23	26	6e-06	0.00064	21.1	0.3	1	23	1513	1535	1513	1535	0.99
24	26	1.2e-05	0.0013	20.1	4.7	1	23	1541	1563	1541	1563	0.98
25	26	2e-06	0.00021	22.6	2.6	1	23	1569	1591	1569	1591	0.99
26	26	0.11	11	7.7	0.7	1	22	1597	1618	1597	1621	0.88

Sequence Information

Coding Sequence: ATGGACAACTCTAATGTTAAGGAATGTTTTATTAATGGAATACCCTACAAATGTCGTACGTGCTTTGATCCTGGAGCAACTGTCTGCTCCTTGAATGAGGAGTTCAAAAGTGCAAAGACCTGGCGAGATTTATTAAAGGATGTGGGACAATTAAAGACAACTCATGACGATTCGTTACCGAAGACTATGTGCTGTGTGTGTTCGGAGAAGCTCAAAAGTTCCTATGATTTTCTGCGGCAAATTCATAgcgtaaatagaaaatttctaaaGCTATTGGGTAAATCAGAAGATCCGCTACAGGATGGTTTTCAAAGTGATGTTGAACAATTTTCCGATTGCTTGGAGGAGTCAACCATTGACTTACCATTGGAACAGTATATAccagaaataaaattagaagATGACTTAGAGAGCACCCACACAAAGTTGGAAGACGAAGaaaaccaaaattatttttcggAAAAGGACTCTGAACATTCTgatgacaacaaaaaatataaaacaaggtCTTCTAAGGCACAATCGAATAGCAATGATGATGTTAGCGAAGAGAAcacCTCATCGGATGAGAGTGACTATAGACGAAGCAAGCGGTTAAGGAAAGAAAGTAacagcattaaaaataaaaattgtggaaaTAGAAAGGGACGTAAAGCACCGGATTATtatgataaaattgaaaagGTTGGCGATCGTTTTGTTTGCCTTTTATGTCAAAAGTCCTTTTCATTAAGAAAAGATTGTGGACGGCACATTGTTTCAATACATGTTCGTCCTATTTTATTCTCCTGTGAATTTTGTGGCCAAGGTTTTAGTCGTAAAGATAAAATTCAACAGCACATTAAACGCATGCATCCTGTCATACCCTCGGATTATCTCGATGATAACTGTAATGACAATGTCTATGATAATGAAGAGAActCTTCTTCCGATGAAAGTGATTATAGATCAACCAAGCGGTTAAAGAAGGAAAGTAAtcgaattataaacaaaaaTCAGCCCGTCAAGCGTAGAAAGGGAAGACAGGCTCCagattattttgataaaattgaaaagatcgACGatcgttttgtttgtttaatctGCCAGAAGTCATTTTCGTTGAGAAAAGATTGCGGCCGCCATATTGCCTCAATACATTTGCGCCAAATCATCTTTCCGTGTGAATTTTGTGGTCAAAGTTTTAGTCGTAAGGATAAAATACAACAGCACATTAAACGTATGCACTCTGACAGACCCTTTTACCCGAAATCCAAACAAAAGGAGTTTCTATTTGGTGATCGTTTGTACAGCCAGCCAACAAAGTGGCATCTGGTCGAATGTAAATTGTGTAATACAACTTTTAGCACAACTAAAGACCTCAGAAAGCACTTGTTACAGCACAGCAGCATAGATTCTCTTGATAATTTAGATTCAAACAGTCAAATTGTTCaacatttatttgcaaatacaaacgatttaaatacaataaaagaaagtatATGCCGTGACATCCACGAGAAGCAGTGGTTTAAATACTACAATGTattaaatgaatattcatttgaaatgtcCATTACTGATACGGAGGTAGAAGATTTGGAAGATGATGCCATACAGTCCAATAGCAAATATAAATGTGAGCTGTGTAATCaacaattttcctttaaatttcaaGCTTTTGCTCACTTAAAAGAAGCCCATCTAGAAGCTGATATACCCTATAAATGTGGTTTATGCAAAATGGAGTTTGtatcattaaaaatgtttgaacatCATAGTCGAACACATTGTCGAAATAGACACAAAATATTGCTGTGTACAAGCTGTCCGGCGAAATTTGTCTGGcccgaaaatatgaaaaatcacAATTGTGCCGCTAAAGTTGTAGTACCCACGACCACAgataagaaaatctttacatGTAATATATGCGATCGGGTATATGAGGTAAagactaaatatgaaaaacatttagaaTCCCATAAAGATGGCAGCATAGCATCgacaaaaactataataaaatgTGGTCTTTGTATAAAATCCTTTGAAAGGCTCTCACAGCTACGGGAACACATGCCTGTGCATGCCGACGGCAAAACTGGTATCGATTTTAAAGGCAGCATTTATATAAAACGGTTTGAACGTTCAAAAACTCTGGATTATGCCCTGCTGCAGCAGGAGATACAAAACGCTTACAGAAAATCTCAAATTAGCCGTTTCTATCGCGCTATGGACAGAGATGGCAATGAAATGGATATTTTAGATTCAGATTCCGATGAAGAAGATTCagaagtttttaataaacagaaaataaaaaaggaatacaaatGTGAACTTTGTAGCGAAATATACAAAAGACGCAAACTTCTGCTAAATCATCAGTTTGAAATACACAATGATGTGCCTCTGCCATACACTTGTGATTCCTGTACTCAACAGTATGTCAGCAATGATTTATTACAGCAGCATTTGGTTAGAGATTGTTGGAACGAACACCGCCGTGTTGCTCAGCAATGTGAATTTTGTAATGCGCGTTTTATATGGccaaataatcttttaaaacataaagaaatacAGCACAAACATCAAAAGCATCCCCGACCTCAAAGAGCCAGTACGCTCAAGtgtgaattttgtgaaaaagtCTTCATATGGCCCAAAGATCTGGTACGACATCGAAAAACCCATACGGAAGGCAAACGATTCTCTTGTCCTCATTGTGAACGTAAGTTTCAACGCAAGGATAACTTATTGGCTCATATTCGGTTACATGACCCCGAAAGCCTATCCATCATTTTAAACTCAAACAGAACTGTAGACTATATACTGCCACATCTATTGAAGCCTCATGGTTGCAAACAAATCAAATGCATGATCTGCTATTCAGAACACATTCGTCTACGTGATTTACGTTCCCATTTAAGATCACATCGTTACAGcattaatttcgaaaaaagaaaagaaactgaaaCTCTTGACACCATATCAGCACAATTGTATCCAGACGAAACGGACATGTGTGAAGAAGATTTAATAAAACGTATTGGAACAGACATTGCTGCTGAAAATAATTTGGAACGTTTTTACTccataacaaatgaaaatggTTATGAAGTGAATTTGGATAGTTCAGAAACGGAGAGCGATTCAgatgacaatgacaatgatgaaaatgatgacgATAACATGGAGGATAAACCGAAACGTCTTTATAAATGTGATTTATGTCCCACAATTAGTTTTAATcgcaaatttaaactttttgaacatcaaaataaaaatcatacttGGGAAGAGGCTCGTCATATTTGCATACACTGCAACAGTCGTTTCCTATCCTCCTATATGTTGCAGTTACACTACAAGAATCAatgtaaaaatacaaaaaaacgacATTTCTGTCGTCGTTGTCCGCTGCGTTTCATGTGGAAGAATAATctgaaaattcatttcataatgGAACATGGCCAAGAGCTAACCAAAGATgCTGATTCAATAAGACGCACTGAATGTTTTCTATGCCAGGAGAAATTCAGTAATCAATGGGAAGTCAAACGCCATATGAATCAATCTCATTCTGATGATCCTGATGTTCATTATTGTCTCTTATGCCCGAAAACATTTTACAGCATTGAACATCTTAATGAACATTTAACACGTCATCGTATTACCAAGACTGACATTAAAACAGTTGAGAGCATAATACATTCCACTTGTTGGCCAAATAGCGATAAAATTATCAAATGTAAATTATGTGGTCAAACATTTGATACCATGGCCAacttaaatgaacatttttcacCCTTGTATCCACAAAACTTGTGTGCTACACAACATTCCCTCGCCaattattcgataacaaatCAAAAAGGTTTTGAATTGCATTTAGAAATGGATTCAGAAACAGAAATAGAAGACGAAATTGACACTGGTGGTCAACAGAATAAAGAACACAAGTTGAAACTACATCCCTACACTTGTTCCTTGTGCGATATATCGTACAGACGAAAATATCAAATGGCTCAGCACCAACGTTCCATGCACAATTATGAAGGTCTAGCTTTAAAATGTGAACGATGCATATTTCGAACTGTGTGTCAGaaaattttagtttatcACCAGACTACACAATGttttaatgaagaaaaacaattcGAATGTAGTgattgcaaatttaaatttatgtggcAGGAAAATCTCAATAATCATGTGTCCATAGTTCATTCACCAAAGGATAAATGCCCGGAAGAAGAGAATATTATTGAAGCAAAAGCTACAAGTAAAGTTGTGCCACcgccaaataataaaaatgatcccCATATTTTCGAATGCATGGACTGTCACCGTCGCTACAATCGTAGGGATCGTTATAAGGCACATTTTAAAAAGTTCCACTCTAATGACACGCAACTAAGGACTGGCACTAATATAAAAATACGCAAAAAGGGTATATCGAAGTCAGAAAAGAAATATCTCTGTGCCTTTTGCGGCCTATCCTTTTCGAATAATTCAAATCTTACAGTTCATATGCGACGTCATACCGGTGAAAAACCGTTTAAATGTGATCTTTGCGATATGGCCTTTCCACGTTCTTCTGATGTGCAAGCTCATCGACGAACTCATACCGGTGAACGTCCATTTAAGTGTATGCATTGTGATAAATCATTTTCCCGACAATATAAACTAAATGTACACAATCGCATACACACTGGCGAGCGTCCTTACAAGTGTACATATTGCACAAAATCCTTTATACAATCGAATGATTTGACCTTACATTTGCGTCGTCATACGGGCGAAAGACCTTACTTGTGCGACATTTGTGGTGAAGGATTCATATGTGCCACCTCATTGAAACAGCATCGCAACTCTAAAGGCCACCAGGACGATAAAAGCATTGATTTGAAACATTGTATGCAACAATTAACACAATTCgatatgaaattctaa
Protein Sequence: MDNSNVKECFINGIPYKCRTCFDPGATVCSLNEEFKSAKTWRDLLKDVGQLKTTHDDSLPKTMCCVCSEKLKSSYDFLRQIHSVNRKFLKLLGKSEDPLQDGFQSDVEQFSDCLEESTIDLPLEQYIPEIKLEDDLESTHTKLEDEENQNYFSEKDSEHSDDNKKYKTRSSKAQSNSNDDVSEENTSSDESDYRRSKRLRKESNSIKNKNCGNRKGRKAPDYYDKIEKVGDRFVCLLCQKSFSLRKDCGRHIVSIHVRPILFSCEFCGQGFSRKDKIQQHIKRMHPVIPSDYLDDNCNDNVYDNEENSSSDESDYRSTKRLKKESNRIINKNQPVKRRKGRQAPDYFDKIEKIDDRFVCLICQKSFSLRKDCGRHIASIHLRQIIFPCEFCGQSFSRKDKIQQHIKRMHSDRPFYPKSKQKEFLFGDRLYSQPTKWHLVECKLCNTTFSTTKDLRKHLLQHSSIDSLDNLDSNSQIVQHLFANTNDLNTIKESICRDIHEKQWFKYYNVLNEYSFEMSITDTEVEDLEDDAIQSNSKYKCELCNQQFSFKFQAFAHLKEAHLEADIPYKCGLCKMEFVSLKMFEHHSRTHCRNRHKILLCTSCPAKFVWPENMKNHNCAAKVVVPTTTDKKIFTCNICDRVYEVKTKYEKHLESHKDGSIASTKTIIKCGLCIKSFERLSQLREHMPVHADGKTGIDFKGSIYIKRFERSKTLDYALLQQEIQNAYRKSQISRFYRAMDRDGNEMDILDSDSDEEDSEVFNKQKIKKEYKCELCSEIYKRRKLLLNHQFEIHNDVPLPYTCDSCTQQYVSNDLLQQHLVRDCWNEHRRVAQQCEFCNARFIWPNNLLKHKEIQHKHQKHPRPQRASTLKCEFCEKVFIWPKDLVRHRKTHTEGKRFSCPHCERKFQRKDNLLAHIRLHDPESLSIILNSNRTVDYILPHLLKPHGCKQIKCMICYSEHIRLRDLRSHLRSHRYSINFEKRKETETLDTISAQLYPDETDMCEEDLIKRIGTDIAAENNLERFYSITNENGYEVNLDSSETESDSDDNDNDENDDDNMEDKPKRLYKCDLCPTISFNRKFKLFEHQNKNHTWEEARHICIHCNSRFLSSYMLQLHYKNQCKNTKKRHFCRRCPLRFMWKNNLKIHFIMEHGQELTKDADSIRRTECFLCQEKFSNQWEVKRHMNQSHSDDPDVHYCLLCPKTFYSIEHLNEHLTRHRITKTDIKTVESIIHSTCWPNSDKIIKCKLCGQTFDTMANLNEHFSPLYPQNLCATQHSLANYSITNQKGFELHLEMDSETEIEDEIDTGGQQNKEHKLKLHPYTCSLCDISYRRKYQMAQHQRSMHNYEGLALKCERCIFRTVCQKILVYHQTTQCFNEEKQFECSDCKFKFMWQENLNNHVSIVHSPKDKCPEEENIIEAKATSKVVPPPNNKNDPHIFECMDCHRRYNRRDRYKAHFKKFHSNDTQLRTGTNIKIRKKGISKSEKKYLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCDMAFPRSSDVQAHRRTHTGERPFKCMHCDKSFSRQYKLNVHNRIHTGERPYKCTYCTKSFIQSNDLTLHLRRHTGERPYLCDICGEGFICATSLKQHRNSKGHQDDKSIDLKHCMQQLTQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01315679;
90% Identity: iTF_01314832;
80% Identity: -