Sper005825.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sarcophaga peregrina
Gene Symbol
-
Assembly
GCA_014635995.1
Location
CM025790.1:4162666-4168395[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.68 54 5.2 1.2 1 23 238 261 238 261 0.86
2 26 0.00012 0.0093 17.0 1.2 1 23 267 290 267 290 0.97
3 26 0.11 8.5 7.7 1.2 1 23 362 385 362 385 0.91
4 26 2.6e-05 0.0021 19.1 1.1 1 23 391 414 391 414 0.97
5 26 0.0002 0.016 16.2 1.3 2 23 445 466 444 466 0.96
6 26 0.012 0.92 10.7 1.2 1 23 543 566 543 566 0.96
7 26 0.01 0.82 10.9 3.1 1 23 573 595 573 595 0.99
8 26 0.00056 0.045 14.9 0.8 1 23 638 660 638 660 0.98
9 26 0.05 4 8.7 0.2 2 20 673 691 672 694 0.91
10 26 0.0026 0.21 12.8 1.5 1 23 774 797 774 797 0.93
11 26 0.036 2.9 9.2 0.2 1 20 804 823 804 825 0.95
12 26 0.41 33 5.8 0.3 2 23 837 859 836 859 0.94
13 26 0.0018 0.15 13.2 0.4 2 23 874 895 873 895 0.97
14 26 3.3e-06 0.00026 21.9 2.0 1 23 901 923 901 923 0.98
15 26 0.041 3.3 9.0 2.2 1 23 1069 1093 1069 1093 0.97
16 26 0.0009 0.072 14.2 0.6 2 23 1168 1190 1167 1190 0.95
17 26 0.0012 0.093 13.8 4.3 1 23 1197 1219 1197 1219 0.96
18 26 0.0046 0.37 12.0 0.2 2 19 1246 1263 1245 1265 0.94
19 26 5.1e-05 0.0041 18.1 1.5 1 23 1323 1346 1323 1346 0.98
20 26 0.13 10 7.4 0.6 1 23 1383 1406 1383 1406 0.94
21 26 0.11 8.6 7.7 6.1 1 23 1440 1463 1440 1463 0.97
22 26 5.1e-07 4.1e-05 24.4 0.7 1 23 1489 1511 1489 1511 0.96
23 26 6e-06 0.00048 21.1 0.3 1 23 1517 1539 1517 1539 0.99
24 26 1.2e-05 0.00096 20.1 4.7 1 23 1545 1567 1545 1567 0.98
25 26 2e-06 0.00016 22.6 2.6 1 23 1573 1595 1573 1595 0.99
26 26 0.1 8.3 7.7 0.7 1 22 1601 1622 1601 1625 0.88

Sequence Information

Coding Sequence
ATGGACAACTCTGGTGTTAAGGAATGTTTTATTAATGGAGTCTCCTACAAATGTCGTACGTGCTTTGATCCCGGAGCAACTGTCTGCTCCTTGAATGAGGAGTTCAAAAGTGCAAAGACCTGGCGAGATTTATTAAAGGATGTGGGCCAATTAAAGACAACTCATGATGATTCGTTGCCGACAACTATGTGTTGCGTGTGTTCGGAGAAACTGAAAAGTTCCTATGATTTCTTGCGGCAAATTCATAGCGTAAATAGAAAGTTTCTAAAGCTATTGGGTAAATCCGAAGATCCGCTACAGGATGGTTTCCAAAGTGATGTTGAACAATTTTCCGATTGCCTGGAGGAGTCAACCATTGACTTACCTTTGGAACAGTATATAccagaaataaaattagaagATGACTTAGAGAACACCCACACAAAGTTGGAAGATGAAGAAAACCCGAATTATTTGTCTGAAAAGGAAGTGATTAAAACTGACTCTGAACATTCTgatgacaacaaaaaatataaaacaaggtCTTTTAAGGCGCAATCGAATACTAATAATGATGACAGCGAAGAAGAcacttcATCGGATGAGAGTGATTGTCGACAACGCAAGCGGTTAAGGAAAGAGAATGgcagtattaaaaacaaaaactgtggaAATAGAAAAGGACGTAAAGCACCGGATtattatgataaaattaaaaaggttgGCGATCGTTTTGTTTGCCTTTTATGTGAAAAGTCCTTTTCATTAAGAAAAGATTGCGGGCGACATATTGTTTCAATACATGTTCGTCCGATTTTATTCTCCTGTGAATTTTGTGGCCAAGGCTTTAGTCGTAAAGATAAAATACAACAGCACATTAAACGCATGCATTCTGACATACCCTCGGATTATCTCGATGATAACTGTAATGACAAAGTCTACGATAATGAAGAGAAcTCTTCGTCCGATGAAAGTGATTATAGATCAACCAAGCGGTTAAAGAAGGAAAGTAatagaattataaacaaaaaTCAGCCCGTAAAGCGTAGAAAGGGACGACAAGCTCCAgattattttgataaaattgaaaagatcgatgatcgttttgtttgtttaatctGTCAGAAGTCATTTTCGTTGAGAAAAGATTGCGGCCGCCATATTGCCTCAATACATTTGCGCCAAATCATCTTTCCGTGTGAATTTTGTGGTCAAAGTTTTAGTCGTAAGGATAAAATACAACAGCACATTAAACGTATGCACTCTGACAGACCCTGTTACCCGAAATCCAAGCAAAAGGAATTTCTATTTGGTGATCGTTTGTATAGCCAACCAACAAAGTGGCATCTAGTCGAATGCAAATTGTGTAATACAACCTTTAGCACAACTAAAGATCTTAGAAATCACTTGTTACAGCACAGCAGAATAGATACTCTTGATAAGTTAGATTTAAACAATCAAATTGTTCAACATTTGTTTGCACATACAAAcgatttaaatgcaataaaagaaaGTATATGCCGTGACATCCATGACAAGCAATGGTTTAAATACTACAATGTCTTAAACGaatattcatttgaaatgtCTATTACTGATACGGAGGTAGAAGATTTGGAAGATGATGCCACACAGCCCGATAGCAAATATAAATGTGAGCTATGCAatcaacaattttcatttaaatttcaagcTTTTGCTCACTTAAAAGAAGCCCATCTAGATGCTGACATACCCTATAAATGTGGTTTATGCAAAATGGAGTTTGTATCGTTAAAAATGTTCGAACATCATAGTCGAACACATTGTCGAAATAGACACAAAATATTGCTGTGTACAAGCTGTCCGGCGAAATTCATCTGgcccgaaaatatgaaaaatcacAATTGTGCCGCTAAAGTTGTAGTACCGACGACcacagataaaaaaatttttacatgcaATATATGCGACCGGGTATATGAGGTAAagactaaatatgaaaaacatttggAGTCCCATAAAGATGGCAGCATTGCATcaacaaaaactataataaaatgtGGCCTTTGCATAAAATCCTTTGAAAAACTCTCACAGCTAAGGGAACACATGCCTGTACATGCCGACGGTAAAACAGGTATCGATTTTAAAGGCAGCATTTATATAAAACGCTTTGAACGTTCAAAAACATTAGATTATGCCTTGCTGCAGCAGGAAATACAAAACGCTTACAGAAAATCTCAAATTAGCCGTTTCTATCGTGCTATGGACAGGGACGGCAATGAAATGGACATTTTAGATTCAGATTCTGCTGAAGAAGATTCTGAAGTTTTTAAagatcagaaattaaaaaaagaatacaaatgtGAACTTTGTAGCGAAATATACAAAAGACGCAAACTTCTGCTAAAACATCAGTTTGAAATGCACAATGATGTCCCTCTACCATACACTTGTGATTCCTGTACTCAACAGTATGTCAGCAATGATTTGTTGCAGCAGCACTTGGTTAGAGATTGTTGGAATGAGCACCGGCGTGTTGCTCAACAATGTGAATTTTGTAATGCGCGTTTTATCTGGCCAAATAATCTcttaaaacataaagaaatacAGcaCAAACATCAAAAGCATCCCCGACCTCAAAGAGCCAGTACCCTCAAGTGtgaattttgtgaaaaagtCTTCATATGGCCCAAAGATCTGGTACGACATCGAAAAACCCATACGGAAGGGAAACGATTCTCTTGTCCTCATTGTGAACGTAAGTTTCAACGCAAGGATAACTTATTAGCTCATATTCGGTTACATGACCCCGAAAGCTTGTCCATCATCTTAAACTCAAACAGAACTGTAGACTATATACTGCCACATCTATTGAAACCTCATGGttgcaaacaaatcaaatgtaTGATCTGCTATTCAGAACACATTCGTCTACGTGATTTACGTTCCCATTTAAGATCACATCGTTACAccattaatttcgaaaaaagaaaagaaactgaaaCTCTCGACACCATATCAGCACAATTATATCCAGACGAAACGGTCATGTGTGAAGAAGATTTAATAAAACGTATTGGAACAGACATTGCTGCTGAAAATAATTTGGAACGATTTTATTccataacaaatgaaaatggtTATGAAGTGAATTTGGATAGTTCAGAAACGGAAAGCGATTCAGatgacaatgaaaatgaaaatgatgagGATAACAAGGAGGATAAACCGAAACGTCTTTATAAATGCGATTTATGTCCTACAATTAGTTTTAATCGTAAATTTAAACTGTTTgatcatcaaaataaaaatcatacttGGGAAGAGGCTCGTCATATTTGCATACACTGCAATAGTCGTTTCCTATCCTCTTATATGTTGCAGTTACACTACAAGAATCaatgtaaaaatacaaaaaaacgacATTTTTGCCGTCGTTGTCCGCTGCGTTTCATGTGGAAGAATAAccttaaaattcatttcataatgGAACATGGCCAAGACCTAACCAAAGATGCTGATTCAATAAGACGCATTGAATGTTTTCTATGCCAGGAGAAATTCAGTAATCAATGGGAAGTCAAACGCCATATGAATCAATCTCATTCTGATGATCCTGATGTTCATTATTGTCTCTTATGCCCGAAAACATTTTACAGCAATGAACATCTTAACGAACATTTAACACGTCATCGTATTACAAAGACTGACATTAAAACAGTTGAGAGCATAATACATTCCACTTGTTGGCCAAATAGCGATAAAATGATCAAATGTAAATTATGTGGTCAAACATTTGATTCTATGGCCAACTTAAATGAGCATTTCTCACCCTTGTATCCACAAAACTTGTGTGCTACACAACATTCCCTCGCCAATTATTCGATAACAAATCAAAAGGGTTTTGAATTGCATTTAGAAATGGATTCGGAAACAGAGATAGAAGACGAAATTGACACTGGTGGTCAACAGAATAAAGAACACAAGTTGAAACAACATCCCTATACTTGTTCCTTGTGCGATATATCGTATAGGCGAAAGTATCAAATGGCTCAGCATCAACGTTCCATGCACAATTATGAAGGTTTAGCTTTAAAATGTGAACGTTGCATATTTCGAACGGTGTGCCAgAAAATATTAGTTTATCACCAGACTACACAGTGttttaatgaagaaaaacaatacGAATGTAATGattgcaaatttaaattcatgtgGCAGGAAAACCTTGATAATCATGTGTCCATATTTCATCCAACAAAGGATAAATGCCCAGAAGAAGAGAATCTTATTGAGACAAAAGTTACAAATAAAGTTGTACCGCCGccgaataataaaaatgatccTCATATTTTCGAATGCATGGACTGTCACCGTCGCTACAATCGTAGGGATCGTTATAAGGCACATTTTAAAAAGTTCCACTCTAATGATAATCAACTTACGACTAGTACTAATATAAAAATACGCAAAAAGGGTATATCGAAGTCGGAAAAGAAATATCTCTGTGCGTTTTGTGGCCTATCCTTTTCGAATAATTCAAATCTTACAGTTCATATGCGACGTCACACCGGTGAAAAGCCATTTAAATGTGATCTTTGCGACATGGCCTTTCCACGTTCCTCTGATGTGCAAGCTCATCGACGAACTCATACCGGAGAACGTCCATTTAAGTGTATGCATTGTGATAAATCATTTTCCCGACAATATAAACTAAATGTACACAATCGCATACACACTGGCGAACGTCCTTACAAGTGTACATATTGCACAAAATCCTTTATACAATCGAATGATTTGACCTTACATTTGCGTCGTCATACGGGCGAAAGGCCTTATTTGTGCGACATTTGTGGTGAAGGATTCATATGTGCCACCTCATTGAAACAGCATCGCAACTCTAAAGGTCACCAGGACGATAAAGGCATTGATTTGAAGCAGTGTATGCAACAGTTAACACAATTCGATATGAAATTCTAA
Protein Sequence
MDNSGVKECFINGVSYKCRTCFDPGATVCSLNEEFKSAKTWRDLLKDVGQLKTTHDDSLPTTMCCVCSEKLKSSYDFLRQIHSVNRKFLKLLGKSEDPLQDGFQSDVEQFSDCLEESTIDLPLEQYIPEIKLEDDLENTHTKLEDEENPNYLSEKEVIKTDSEHSDDNKKYKTRSFKAQSNTNNDDSEEDTSSDESDCRQRKRLRKENGSIKNKNCGNRKGRKAPDYYDKIKKVGDRFVCLLCEKSFSLRKDCGRHIVSIHVRPILFSCEFCGQGFSRKDKIQQHIKRMHSDIPSDYLDDNCNDKVYDNEENSSSDESDYRSTKRLKKESNRIINKNQPVKRRKGRQAPDYFDKIEKIDDRFVCLICQKSFSLRKDCGRHIASIHLRQIIFPCEFCGQSFSRKDKIQQHIKRMHSDRPCYPKSKQKEFLFGDRLYSQPTKWHLVECKLCNTTFSTTKDLRNHLLQHSRIDTLDKLDLNNQIVQHLFAHTNDLNAIKESICRDIHDKQWFKYYNVLNEYSFEMSITDTEVEDLEDDATQPDSKYKCELCNQQFSFKFQAFAHLKEAHLDADIPYKCGLCKMEFVSLKMFEHHSRTHCRNRHKILLCTSCPAKFIWPENMKNHNCAAKVVVPTTTDKKIFTCNICDRVYEVKTKYEKHLESHKDGSIASTKTIIKCGLCIKSFEKLSQLREHMPVHADGKTGIDFKGSIYIKRFERSKTLDYALLQQEIQNAYRKSQISRFYRAMDRDGNEMDILDSDSAEEDSEVFKDQKLKKEYKCELCSEIYKRRKLLLKHQFEMHNDVPLPYTCDSCTQQYVSNDLLQQHLVRDCWNEHRRVAQQCEFCNARFIWPNNLLKHKEIQHKHQKHPRPQRASTLKCEFCEKVFIWPKDLVRHRKTHTEGKRFSCPHCERKFQRKDNLLAHIRLHDPESLSIILNSNRTVDYILPHLLKPHGCKQIKCMICYSEHIRLRDLRSHLRSHRYTINFEKRKETETLDTISAQLYPDETVMCEEDLIKRIGTDIAAENNLERFYSITNENGYEVNLDSSETESDSDDNENENDEDNKEDKPKRLYKCDLCPTISFNRKFKLFDHQNKNHTWEEARHICIHCNSRFLSSYMLQLHYKNQCKNTKKRHFCRRCPLRFMWKNNLKIHFIMEHGQDLTKDADSIRRIECFLCQEKFSNQWEVKRHMNQSHSDDPDVHYCLLCPKTFYSNEHLNEHLTRHRITKTDIKTVESIIHSTCWPNSDKMIKCKLCGQTFDSMANLNEHFSPLYPQNLCATQHSLANYSITNQKGFELHLEMDSETEIEDEIDTGGQQNKEHKLKQHPYTCSLCDISYRRKYQMAQHQRSMHNYEGLALKCERCIFRTVCQKILVYHQTTQCFNEEKQYECNDCKFKFMWQENLDNHVSIFHPTKDKCPEEENLIETKVTNKVVPPPNNKNDPHIFECMDCHRRYNRRDRYKAHFKKFHSNDNQLTTSTNIKIRKKGISKSEKKYLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCDMAFPRSSDVQAHRRTHTGERPFKCMHCDKSFSRQYKLNVHNRIHTGERPYKCTYCTKSFIQSNDLTLHLRRHTGERPYLCDICGEGFICATSLKQHRNSKGHQDDKGIDLKQCMQQLTQFDMKF*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01315679;
90% Identity
iTF_01315679; iTF_01314003;
80% Identity
-