Ssub022866.1
Basic Information
- Insect
- Sarcophaga subvicina
- Gene Symbol
- dl
- Assembly
- GCA_936440885.2
- Location
- CAKZFJ020000314.1:953204-958454[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-74 1.6e-70 237.4 0.1 1 169 67 237 67 237 0.99 2 2 0.67 4.7e+03 -1.7 0.4 66 109 610 653 599 685 0.61
Sequence Information
- Coding Sequence
- ATGTATCAAAATCCTGCCAATAATAACGTTTTAGCTAGTGGGTGTGCCAATAATGGTACAACTACCAGCAACGCAAACGCTCAAATTATGGATCCAAATCAACAATCACCACCGCAGCAAACTATAAATTATAATGGAATGCAAGCTCAGCAACAAGCGCCagccaatacaaataaaaatgtacgCAAAAAACCCTACGTTAAAATAACAGAACAGCCAGCAAGTAAGGCCTTGAGATTCCGTTACGAGTGTGAAGGTCGTTCGGCTGGTTCTATATTGGGTGTCAATTCAACACCCGAATGTAAAACATATCCCACAATTTCAATTGTGGGATATAAAGGACGTGCCGTAGTTGTTGTGTCGTGTGTCACCAAAGATCCGCCATATAGACCTCATCCTCATAATCTAGTCGGCAAAGAGGGATGCAAGAAGGGTGTCTGTACTCTTGAAATCAACTCTGAAACGATGAGGGCTGTATTCAGCAACCTAGGCATACAGTGTGTAAAAAAGAAAGACATTGAAGCATCTCTTAAAGCTCGAGAAGAAATTCGCGTCGATCCGTTTAAaaCCGGATTTACGCACAAACATCAACCCTCTAGTATTGATCTAAACTCGGTTAGATTATGTTTCCAAGTGTTCATGGAGAGTGATCAAAAAGGCCGTTTTACACAGCCCTTGGCTCCTGTGGTATCGGAACCTATATTCGACAAAAAGGCCATGTCCGAGCTAGTCATTAGTCGTCTGAGTAGTCGCTCTGCCAGTGTCTTAGGCAATACTCGTATAATTTTGTTGTGCGAAAAAGTAGCCAATAAAGACATTTCGGTGCGTTTCTATGAAGAGAATAATGGCCAAACGATTTGGGAGGCATATGGAGATTTTAAACATACCGACGTGCATAAACAGACTGCCATAACATTTAAAACGCCTCGATATCGTCAAATTGACATAACAGAACCTGCTAGGGTGTTTATTCAATTAAAGCGTCCATCGGATGGTGTTATGAGTGAACCATTTCCATTCAAATATGTTCCCTTAAATAGAATACGATTTTTGGATCTTCGTTCGAAACTAGAGAATAAGCCCGACTCAGAGATTTTCCAAGAAATTCAAAGTAGTGAAATAGAGAATTATATTCCCAACGATAAAGTGGAAGTTAATGATTTAAATTCTCCATCAGATTCATCGCCTTTAAGACGTAAACGTCAAAAAACTAACGATGACGGCGCAGATTTGTTAttaaagcaacagcaacagcaacatcaaaaTGATCACCAAGATTTTCgcCTATCTAGCTGGAAGCCTTCCAATGTGCCAACGGTTAAAACAGAATCAAGAGACACGTCACCTCGACCATTTGGTAGTTACCATGCTCCACCAGAACCTCAGTCTCTGTCACCATCTAGTGCCTATACTCACAACACACCATCGCCTTATAACGTGACACCTACGGTGACAGGTAATCAACAGTTAATGTCGCCGAATCATCAGTATAATGCAAATAGTGCAGGTCCCAGTGCGATCAACAACTTAAATCCGAATTCTCCGCCACAAGTAGATATTGGTGCATTTCATCAAccgccacaacaacaacagcaacagcagcaatatcACGTGAACAATTTTGGGAATGCAGGCGCCACACATTGGGAAACAAAATTCAACCCTGCCGCTGCTGCTACGAACAATAATTTGAACAATCTCACAAATGCCAACACATTTACCATGCATAATCTATTAACACCGGCCAGCGCAAAAGTTGGTCAAGCCAATGGCACAAGTGGGGCCGGAAACAATTGGAATATAAGATCCAATCATTTTCATCCTCAACATAATCACTTACAACAGCGACAACAGCATCagcaatatcaacaacaaacaacaacaaatgaagcGATGACAACTAGTAATAATACTGCAGTAGGTGTAACAAATATCGCCAATGgcaataatgaaaataacaaccacAATGAACATGGTCTCAGTAACCTTTTAAATTTAGACAGCGGACAACTCGTTCGTATGAACTCTGAAGATcagcaaatgttgcaactaaatCCAGACGACCTTCAAATTTCAAATCTATCTATTTCCACATAG
- Protein Sequence
- MYQNPANNNVLASGCANNGTTTSNANAQIMDPNQQSPPQQTINYNGMQAQQQAPANTNKNVRKKPYVKITEQPASKALRFRYECEGRSAGSILGVNSTPECKTYPTISIVGYKGRAVVVVSCVTKDPPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEASLKAREEIRVDPFKTGFTHKHQPSSIDLNSVRLCFQVFMESDQKGRFTQPLAPVVSEPIFDKKAMSELVISRLSSRSASVLGNTRIILLCEKVANKDISVRFYEENNGQTIWEAYGDFKHTDVHKQTAITFKTPRYRQIDITEPARVFIQLKRPSDGVMSEPFPFKYVPLNRIRFLDLRSKLENKPDSEIFQEIQSSEIENYIPNDKVEVNDLNSPSDSSPLRRKRQKTNDDGADLLLKQQQQQHQNDHQDFRLSSWKPSNVPTVKTESRDTSPRPFGSYHAPPEPQSLSPSSAYTHNTPSPYNVTPTVTGNQQLMSPNHQYNANSAGPSAINNLNPNSPPQVDIGAFHQPPQQQQQQQQYHVNNFGNAGATHWETKFNPAAAATNNNLNNLTNANTFTMHNLLTPASAKVGQANGTSGAGNNWNIRSNHFHPQHNHLQQRQQHQQYQQQTTTNEAMTTSNNTAVGVTNIANGNNENNNHNEHGLSNLLNLDSGQLVRMNSEDQQMLQLNPDDLQISNLSIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313528;
- 90% Identity
- iTF_01313528;
- 80% Identity
- -