Scar021327.1
Basic Information
- Insect
- Sarcophaga carnaria
- Gene Symbol
- dl
- Assembly
- GCA_958299815.1
- Location
- OY283152.1:10719750-10725216[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-73 5.5e-70 235.8 0.2 1 169 67 237 67 237 0.99 2 2 1.3 7.1e+03 -2.1 0.3 68 99 598 629 585 666 0.59
Sequence Information
- Coding Sequence
- ATGTATCAAAATCCAGCCAATAATAACGTTTTAGCTTGCGAATGTGCCAATAATGGTACAACTACCAGCAACGCAAACGCTCAAATTATGGATCCAAATCAACAATCACCACAACAGCAAACTATAAATTATAATGGAATGCAACCTCAGCAACAAGCGCCAGCCAATACGAATAAAAGTGTACGCAAAAAACCTTACGTTAAAATAACGGAACAGCCAGCAAGTAAAGCCTTGAGATTTCGTTACGAGTGTGAAGGTCGTTCGGCTGGTTCTATACTGGGTGTCAATTCAACACCCGAATGTAAAACATATCCCACAATTGAAATTGTTGGATATAAAGGACGTGCCGTAGTTGTTGTATCGTGTGTCACCAAAAATCCGCCATTTAGACCTCATCCTCATAACCTAGTCGGCAAAGAGGGATGCAAGAAGGGTGTCTGTACTCTTGAAATCAACTCTGAAACGATGAGAGCTGTATTCAGCAACCTAGGCATACGGTGTGTAAAAAAGAAAGACATTGAAGCATCTCTTAAAGCTCGAGAGGAAATTCGCGTCGATCCATTTAAAACCGGATTTAGGCACAAACATCAACCCTCTAGTATCGATCTAAACTCGGTTAGATTATGTTTCCAAGTGTTCATAGAGAGTGATCAAAAAGGCCGTTTTACACAGCCCTTGGCGCCTGTAGTATCGGAACCTATATTCGACAAAAAGGCCATGTCCGATCTAGTCATTTGTCGTCTGAGTAGTCGCTCTGCCAGTGTCTTAGGCAATACTCGTATAATTTTGTTGTGCGAAAAACTAGCCAATAAAGACATTTCGGTGCGTTTCTATGAAGAGAATAATGGCCAAACGATTTGGGAGGCATATGGAGATTTTAAAGATACCGATGTGCATAAACAGACTGCCATAACATTTAAAACGCCCCGATATCGTCAAATTGACATAACAGAACCTGCTAGGGTGTTTATTCAATTAAAGCGTCCATCGGATGGTGTTATGAGTGAACCATTTCCATTCAAATATGTTCCCTTAAATAGAATACGATTTTTGGATCTTCGTTCGAAACTAGAGAATAAGCCCGACTCAGAGATTTTCCAAGAAATTGAAAGTAGTGAAATAGAGAATTATATTCCCAACGATAAAGTGGAAGTTAATGATTTAAATTCTCCATCAGATTCCTCGCCTTTGAGACGTAAACGTCAAAAAACTAACGATGACAGCGCAGATTTGTTattacagcaacagcaaaagcaaCATCAAAATGATCACCAAGATTTTCACACATCACCTCGACCATTTGGTAGTTACCATGCTCCTCCAGAACCTCAGTCTCCGTCACCATCTAGTGCCTATACTCACAACACACCATCGCCTTATAACGTAACACCTACGGTGACAGGTAATCAACAGTTAATGTCGCCGAATCATCAGTATAATGCAAACAGTGTAGGTCCCAGTGGGATCAACAACGTAAATCCGAATTCTCCGCCACAAGTAGATATTGGTGATTATAATGCATTTCATCAAccgccacaacaacaacaacaacagcagcagcaatatcaTGTGAACAATTTTGGGAATGCAGGCGCCACACATTGGGAAACAAAATTCAACCCTGCCGCTGCTGCTACGAACAATAATTTGGACAATCTCACAAATGCCAGCACATTTACCATGCATAATCTATTAACACCGACCAGCGCAAAAGTTGTTCAAGCCAATGGCACAAGTGGGGCCGGAAACAATTGGAATATAACATCCAATCATTTTCATCCTCAACATAATCACTTACAACAGCGACAACAGCATCagcaatatcaacaacaaacaacaacaaatgaagcGATGACAACTAGTAATAATACTGCAGTAGGTGTAACTAATATCGTAAATGgcaataatgaaaataacaaccacAATGAACATGGTATCAGTAACCTTTTAAATTTAGACAGCGGAGAACTCGTTCGTATTAACTCTGAAGATCagcaaatgttgcaactaaaTCCAGACGACCTTCAAATTTCAAATCTATCTATTTCCACATAG
- Protein Sequence
- MYQNPANNNVLACECANNGTTTSNANAQIMDPNQQSPQQQTINYNGMQPQQQAPANTNKSVRKKPYVKITEQPASKALRFRYECEGRSAGSILGVNSTPECKTYPTIEIVGYKGRAVVVVSCVTKNPPFRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIRCVKKKDIEASLKAREEIRVDPFKTGFRHKHQPSSIDLNSVRLCFQVFIESDQKGRFTQPLAPVVSEPIFDKKAMSDLVICRLSSRSASVLGNTRIILLCEKLANKDISVRFYEENNGQTIWEAYGDFKDTDVHKQTAITFKTPRYRQIDITEPARVFIQLKRPSDGVMSEPFPFKYVPLNRIRFLDLRSKLENKPDSEIFQEIESSEIENYIPNDKVEVNDLNSPSDSSPLRRKRQKTNDDSADLLLQQQQKQHQNDHQDFHTSPRPFGSYHAPPEPQSPSPSSAYTHNTPSPYNVTPTVTGNQQLMSPNHQYNANSVGPSGINNVNPNSPPQVDIGDYNAFHQPPQQQQQQQQQYHVNNFGNAGATHWETKFNPAAAATNNNLDNLTNASTFTMHNLLTPTSAKVVQANGTSGAGNNWNITSNHFHPQHNHLQQRQQHQQYQQQTTTNEAMTTSNNTAVGVTNIVNGNNENNNHNEHGISNLLNLDSGELVRINSEDQQMLQLNPDDLQISNLSIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01312804; iTF_01314437; iTF_01315261;
- 90% Identity
- iTF_01315261;
- 80% Identity
- -